RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 TXNRD3Q86VQ6 643 aa11.92□□□□□ -0.5
RAB5B-205ENST00000549034 SSH3Q8TE77 659 aa11.92□□□□□ -0.5
RAB5B-205ENST00000549034 CRBNQ96SW2 442 aa11.92□□□□□ -0.5
RAB5B-205ENST00000549034 RRAGCQ9HB90 399 aa11.92□□□□□ -0.5
RAB5B-205ENST00000549034 FBXO3Q9UK99 471 aa11.92□□□□□ -0.5
RAB5B-205ENST00000549034 GJA3Q9Y6H8 435 aa11.92□□□□□ -0.5
RAB5B-205ENST00000549034 KDM2BQ8NHM5 1336 aa11.91□□□□□ -0.5
RAB5B-205ENST00000549034 ECE2O60344 883 aa11.91□□□□□ -0.5
RAB5B-205ENST00000549034 RAD17O75943 681 aa11.91□□□□□ -0.5
RAB5B-205ENST00000549034 CIAO1O76071 339 aa11.91□□□□□ -0.5
RAB5B-205ENST00000549034 OS9Q13438 667 aaPredicted RBP11.91□□□□□ -0.5
RAB5B-205ENST00000549034 UBE4AQ14139 1066 aa11.91□□□□□ -0.5
RAB5B-205ENST00000549034 ZNF784Q8NCA9 323 aaPredicted RBP11.91□□□□□ -0.5
RAB5B-205ENST00000549034 GPBP1L1Q9HC44 474 aaPredicted RBP11.91□□□□□ -0.5
RAB5B-205ENST00000549034 KCNQ5Q9NR82 932 aa11.91□□□□□ -0.5
RAB5B-205ENST00000549034 ZC3H4Q9UPT8 1303 aaKnown RBP11.9□□□□□ -0.5
RAB5B-205ENST00000549034 UTRNP46939 3433 aa11.9□□□□□ -0.5
RAB5B-205ENST00000549034 KLRK1P26718 216 aa11.9□□□□□ -0.5
RAB5B-205ENST00000549034 CXCL9Q07325 125 aa11.9□□□□□ -0.5
RAB5B-205ENST00000549034 TNIP1Q15025 636 aa11.9□□□□□ -0.5
RAB5B-205ENST00000549034 CIAPIN1Q6FI81 312 aa11.9□□□□□ -0.5
RAB5B-205ENST00000549034 COA1Q9GZY4 146 aa11.9□□□□□ -0.5
RAB5B-205ENST00000549034 ZNF541Q9H0D2 1346 aa11.89□□□□□ -0.51
RAB5B-205ENST00000549034 YDJCA8MPS7 323 aa11.89□□□□□ -0.51
RAB5B-205ENST00000549034 HMMRO75330 724 aa11.89□□□□□ -0.51
RAB5B-205ENST00000549034 IFIT1P09914 478 aaKnown RBP11.89□□□□□ -0.51
RAB5B-205ENST00000549034 GYG1P46976 350 aa11.89□□□□□ -0.51
RAB5B-205ENST00000549034 TFCP2Q12800 502 aa11.89□□□□□ -0.51
RAB5B-205ENST00000549034 PODNQ7Z5L7 613 aa11.89□□□□□ -0.51
RAB5B-205ENST00000549034 FBXW7Q969H0 707 aa11.89□□□□□ -0.51
RAB5B-205ENST00000549034 CD209Q9NNX6 404 aa11.89□□□□□ -0.51
RAB5B-205ENST00000549034 MED23Q9ULK4 1368 aa11.89□□□□□ -0.51
RAB5B-205ENST00000549034 DUOX1Q9NRD9 1551 aa11.88□□□□□ -0.51
RAB5B-205ENST00000549034 COL4A5P29400 1685 aa11.88□□□□□ -0.51
RAB5B-205ENST00000549034 SLC5A1P13866 664 aa11.88□□□□□ -0.51
RAB5B-205ENST00000549034 HIBADHP31937 336 aaKnown RBP11.88□□□□□ -0.51
RAB5B-205ENST00000549034 TIMM10P62072 90 aa11.88□□□□□ -0.51
RAB5B-205ENST00000549034 IRX6P78412 446 aaPredicted RBP11.88□□□□□ -0.51
RAB5B-205ENST00000549034 PUM3Q15397 648 aaKnown RBP11.88□□□□□ -0.51
RAB5B-205ENST00000549034 CAVIN4Q5BKX8 364 aa11.88□□□□□ -0.51
RAB5B-205ENST00000549034 C15orf52Q6ZUT6 534 aaKnown RBP11.88□□□□□ -0.51
RAB5B-205ENST00000549034 ZNF804AQ7Z570 1209 aa11.88□□□□□ -0.51
RAB5B-205ENST00000549034 VPS37DQ86XT2 251 aa11.88□□□□□ -0.51
RAB5B-205ENST00000549034 SIRT2Q8IXJ6 389 aa11.88□□□□□ -0.51
RAB5B-205ENST00000549034 GPC2Q8N158 579 aa11.88□□□□□ -0.51
RAB5B-205ENST00000549034 VGLL2Q8N8G2 317 aa11.88□□□□□ -0.51
RAB5B-205ENST00000549034 LPIN2Q92539 896 aa11.88□□□□□ -0.51
RAB5B-205ENST00000549034 FAM84BQ96KN1 310 aaPredicted RBP11.88□□□□□ -0.51
RAB5B-205ENST00000549034 NEUROD6Q96NK8 337 aa11.88□□□□□ -0.51
RAB5B-205ENST00000549034 NMRK2Q9NPI5 230 aa11.88□□□□□ -0.51
RAB5B-205ENST00000549034 AKAP2Q9Y2D5 859 aa11.88□□□□□ -0.51
RAB5B-205ENST00000549034 LTBP1Q14766 1721 aa11.87□□□□□ -0.51
RAB5B-205ENST00000549034 TIAM2Q8IVF5 1701 aa11.87□□□□□ -0.51
RAB5B-205ENST00000549034 USP17L3A6NCW0 530 aa11.87□□□□□ -0.51
RAB5B-205ENST00000549034 USP17L4A6NCW7 530 aa11.87□□□□□ -0.51
RAB5B-205ENST00000549034 PSMD14O00487 310 aa11.87□□□□□ -0.51
RAB5B-205ENST00000549034 SASH1O94885 1247 aa11.87□□□□□ -0.51
RAB5B-205ENST00000549034 VEGFAP15692 232 aaPredicted RBP11.87□□□□□ -0.51
RAB5B-205ENST00000549034 FGFR2P21802 821 aa11.87□□□□□ -0.51
RAB5B-205ENST00000549034 BCAMP50895 628 aa11.87□□□□□ -0.51
RAB5B-205ENST00000549034 ATP2B3Q16720 1220 aa11.87□□□□□ -0.51
RAB5B-205ENST00000549034 TTLL5Q6EMB2 1281 aa11.87□□□□□ -0.51
RAB5B-205ENST00000549034 USP17L1Q7RTZ2 530 aa11.87□□□□□ -0.51
RAB5B-205ENST00000549034 EXOC6Q8TAG9 804 aa11.87□□□□□ -0.51
RAB5B-205ENST00000549034 BCL11AQ9H165 835 aa11.87□□□□□ -0.51
RAB5B-205ENST00000549034 EXOC6BQ9Y2D4 811 aa11.87□□□□□ -0.51
RAB5B-205ENST00000549034 NOP58Q9Y2X3 529 aaKnown RBP11.87□□□□□ -0.51
RAB5B-205ENST00000549034 APBB1O00213 710 aa11.86□□□□□ -0.51
RAB5B-205ENST00000549034 FRAT2O75474 233 aaPredicted RBP11.86□□□□□ -0.51
RAB5B-205ENST00000549034 GTF2IP78347 998 aa11.86□□□□□ -0.51
RAB5B-205ENST00000549034 HSP90AB4PQ58FF6 505 aa11.86□□□□□ -0.51
RAB5B-205ENST00000549034 PCDHB15Q9Y5E8 787 aa11.86□□□□□ -0.51
RAB5B-205ENST00000549034 IRS2Q9Y4H2 1338 aa11.86□□□□□ -0.51
RAB5B-205ENST00000549034 A0A1B0GUL6 1792 aa11.85□□□□□ -0.51
RAB5B-205ENST00000549034 POTECB2RU33 542 aa11.85□□□□□ -0.51
RAB5B-205ENST00000549034 VIL1P09327 827 aaKnown RBP11.85□□□□□ -0.51
RAB5B-205ENST00000549034 LMOD1P29536 600 aaPredicted RBP11.85□□□□□ -0.51
RAB5B-205ENST00000549034 GMPSP49915 693 aaPredicted RBP11.85□□□□□ -0.51
RAB5B-205ENST00000549034 FBXO33Q7Z6M2 555 aa11.85□□□□□ -0.51
RAB5B-205ENST00000549034 C16orf71Q8IYS4 520 aaPredicted RBP11.85□□□□□ -0.51
RAB5B-205ENST00000549034 IQSEC3Q9UPP2 1182 aaPredicted RBP11.85□□□□□ -0.51
RAB5B-205ENST00000549034 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.85□□□□□ -0.51
RAB5B-205ENST00000549034 A0A1B0GUL7 405 aa11.84□□□□□ -0.51
RAB5B-205ENST00000549034 IQCA1LA6NCM1 817 aa11.84□□□□□ -0.51
RAB5B-205ENST00000549034 IL1R1P14778 569 aa11.84□□□□□ -0.51
RAB5B-205ENST00000549034 EPS15P42566 896 aa11.84□□□□□ -0.51
RAB5B-205ENST00000549034 GORABQ5T7V8 394 aa11.84□□□□□ -0.51
RAB5B-205ENST00000549034 STRIP1Q5VSL9 837 aa11.84□□□□□ -0.51
RAB5B-205ENST00000549034 RSBN1LQ6PCB5 846 aaPredicted RBP11.84□□□□□ -0.51
RAB5B-205ENST00000549034 ERC1Q8IUD2 1116 aa11.84□□□□□ -0.51
RAB5B-205ENST00000549034 TDRD7Q8NHU6 1098 aaKnown RBP11.84□□□□□ -0.51
RAB5B-205ENST00000549034 XAGE2Q96GT9 111 aa11.84□□□□□ -0.51
RAB5B-205ENST00000549034 MXD3Q9BW11 206 aa11.84□□□□□ -0.51
RAB5B-205ENST00000549034 CNOT7Q9UIV1 285 aaKnown RBP11.84□□□□□ -0.51
RAB5B-205ENST00000549034 HACL1Q9UJ83 578 aa11.84□□□□□ -0.51
RAB5B-205ENST00000549034 JAG2Q9Y219 1238 aa11.84□□□□□ -0.51
RAB5B-205ENST00000549034 SCN9AQ15858 1988 aa11.83□□□□□ -0.52
RAB5B-205ENST00000549034 H7C1D1 291 aa11.83□□□□□ -0.52
RAB5B-205ENST00000549034 RAB11FIP3O75154 756 aa11.83□□□□□ -0.52
RAB5B-205ENST00000549034 CENPBP07199 599 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms