RNA–Protein interactions for RNA: ENST00000549021.5

TGFBR1-206, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2

Gene TGFBR1, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-206ENST00000549021 COL22A1Q8NFW1 1626 aaPredicted RBP8.53□□□□□ -1.04
TGFBR1-206ENST00000549021 PHLPP1O60346 1717 aa8.52□□□□□ -1.05
TGFBR1-206ENST00000549021 LRRC37A3O60309 1634 aa8.52□□□□□ -1.05
TGFBR1-206ENST00000549021 LILRA1O75019 489 aa8.52□□□□□ -1.05
TGFBR1-206ENST00000549021 ZIC2O95409 532 aaPredicted RBP8.52□□□□□ -1.05
TGFBR1-206ENST00000549021 MFAP1P55081 439 aaKnown RBP8.52□□□□□ -1.05
TGFBR1-206ENST00000549021 LMOD3Q0VAK6 560 aa8.52□□□□□ -1.05
TGFBR1-206ENST00000549021 TMEM164Q5U3C3 297 aa8.52□□□□□ -1.05
TGFBR1-206ENST00000549021 STK32AQ8WU08 396 aa8.52□□□□□ -1.05
TGFBR1-206ENST00000549021 MYH16Q9H6N6 1097 aa8.52□□□□□ -1.05
TGFBR1-206ENST00000549021 DACH1Q9UI36 760 aa8.52□□□□□ -1.05
TGFBR1-206ENST00000549021 ZMIZ1Q9ULJ6 1067 aa8.52□□□□□ -1.05
TGFBR1-206ENST00000549021 CPDO75976 1380 aa8.51□□□□□ -1.05
TGFBR1-206ENST00000549021 RRP1P56182 461 aaKnown RBP8.51□□□□□ -1.05
TGFBR1-206ENST00000549021 ZC3H6P61129 1189 aaKnown RBP8.51□□□□□ -1.05
TGFBR1-206ENST00000549021 CALD1Q05682 793 aaKnown RBP8.51□□□□□ -1.05
TGFBR1-206ENST00000549021 CRTC2Q53ET0 693 aaPredicted RBP8.51□□□□□ -1.05
TGFBR1-206ENST00000549021 TRIM50Q86XT4 487 aa8.51□□□□□ -1.05
TGFBR1-206ENST00000549021 FAM200AQ8TCP9 573 aa8.51□□□□□ -1.05
TGFBR1-206ENST00000549021 ZFAND3Q9H8U3 227 aa8.51□□□□□ -1.05
TGFBR1-206ENST00000549021 IVNS1ABPQ9Y6Y0 642 aa8.51□□□□□ -1.05
TGFBR1-206ENST00000549021 SIPA1L3O60292 1781 aaPredicted RBP8.5□□□□□ -1.05
TGFBR1-206ENST00000549021 CT47B1P0C2W7 299 aaPredicted RBP8.5□□□□□ -1.05
TGFBR1-206ENST00000549021 NBPF6Q5VWK0 638 aa8.5□□□□□ -1.05
TGFBR1-206ENST00000549021 LTV1Q96GA3 475 aaPredicted RBP8.5□□□□□ -1.05
TGFBR1-206ENST00000549021 NBPF4Q96M43 638 aa8.5□□□□□ -1.05
TGFBR1-206ENST00000549021 ATP13A2Q9NQ11 1180 aa8.5□□□□□ -1.05
TGFBR1-206ENST00000549021 PGPEP1Q9NXJ5 209 aa8.5□□□□□ -1.05
TGFBR1-206ENST00000549021 DOLKQ9UPQ8 538 aa8.5□□□□□ -1.05
TGFBR1-206ENST00000549021 NOD1Q9Y239 953 aa8.5□□□□□ -1.05
TGFBR1-206ENST00000549021 SCN11AQ9UI33 1791 aa8.5□□□□□ -1.05
TGFBR1-206ENST00000549021 PKD1L3Q7Z443 1732 aa8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 COL14A1Q05707 1796 aaKnown RBP8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 HTATSF1O43719 755 aaKnown RBP8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 ZNF853P0CG23 659 aa8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 ATP1A2P50993 1020 aa8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 ERVK-9P63128 1117 aa8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 IRX6P78412 446 aaPredicted RBP8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 PTK7Q13308 1070 aa8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 MTHFSDQ2M296 383 aaKnown RBP8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 TRIM46Q7Z4K8 759 aa8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 MEIOBQ8N635 442 aa8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 ANKRD24Q8TF21 1146 aa8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 CCDC85AQ96PX6 553 aaPredicted RBP8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 TMPRSS4Q9NRS4 437 aa8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 RBM19Q9Y4C8 960 aaKnown RBP8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 COL16A1Q07092 1604 aaPredicted RBP8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 ADAMTS7Q9UKP4 1686 aa8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 FANCIQ9NVI1 1328 aa8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 PARP4Q9UKK3 1724 aaKnown RBP8.49□□□□□ -1.05
TGFBR1-206ENST00000549021 KDM3BQ7LBC6 1761 aa8.48□□□□□ -1.05
TGFBR1-206ENST00000549021 ADD1P35611 737 aaKnown RBP8.48□□□□□ -1.05
TGFBR1-206ENST00000549021 GNAI1P63096 354 aa8.48□□□□□ -1.05
TGFBR1-206ENST00000549021 OGFOD1Q8N543 542 aa8.48□□□□□ -1.05
TGFBR1-206ENST00000549021 ZNF784Q8NCA9 323 aaPredicted RBP8.48□□□□□ -1.05
TGFBR1-206ENST00000549021 GAS2L2Q8NHY3 880 aa8.48□□□□□ -1.05
TGFBR1-206ENST00000549021 LRRC59Q96AG4 307 aaKnown RBP8.48□□□□□ -1.05
TGFBR1-206ENST00000549021 CDCA7Q9BWT1 371 aaPredicted RBP8.48□□□□□ -1.05
TGFBR1-206ENST00000549021 IFT57Q9NWB7 429 aa8.48□□□□□ -1.05
TGFBR1-206ENST00000549021 KIAA0232Q92628 1395 aa8.48□□□□□ -1.05
TGFBR1-206ENST00000549021 FAM83GA6ND36 823 aa8.47□□□□□ -1.05
TGFBR1-206ENST00000549021 TSGA10IPQ3SY00 556 aa8.47□□□□□ -1.05
TGFBR1-206ENST00000549021 OXLD1Q5BKU9 147 aa8.47□□□□□ -1.05
TGFBR1-206ENST00000549021 ANKMY2Q8IV38 441 aa8.47□□□□□ -1.05
TGFBR1-206ENST00000549021 USHBP1Q8N6Y0 703 aa8.47□□□□□ -1.05
TGFBR1-206ENST00000549021 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.47□□□□□ -1.05
TGFBR1-206ENST00000549021 KDF1Q8NAX2 398 aaPredicted RBP8.47□□□□□ -1.05
TGFBR1-206ENST00000549021 TSR2Q969E8 191 aaKnown RBP8.47□□□□□ -1.05
TGFBR1-206ENST00000549021 ZNF594Q96JF6 807 aaPredicted RBP8.47□□□□□ -1.05
TGFBR1-206ENST00000549021 PLEKHG2Q9H7P9 1386 aa8.47□□□□□ -1.05
TGFBR1-206ENST00000549021 CRB1P82279 1406 aa8.46□□□□□ -1.05
TGFBR1-206ENST00000549021 WNK3Q9BYP7 1800 aa8.46□□□□□ -1.06
TGFBR1-206ENST00000549021 TOM1O60784 492 aa8.46□□□□□ -1.06
TGFBR1-206ENST00000549021 RARSP54136 660 aaKnown RBP8.46□□□□□ -1.06
TGFBR1-206ENST00000549021 EXOSC9Q06265 439 aaKnown RBP8.46□□□□□ -1.06
TGFBR1-206ENST00000549021 MRPL14Q6P1L8 145 aaKnown RBP8.46□□□□□ -1.06
TGFBR1-206ENST00000549021 THUMPD2Q9BTF0 503 aaKnown RBP8.46□□□□□ -1.06
TGFBR1-206ENST00000549021 DNAAF2Q9NVR5 837 aaKnown RBP8.46□□□□□ -1.06
TGFBR1-206ENST00000549021 PPP4R2Q9NY27 417 aa8.46□□□□□ -1.06
TGFBR1-206ENST00000549021 PLCH1Q4KWH8 1693 aa8.46□□□□□ -1.06
TGFBR1-206ENST00000549021 MAP3K5Q99683 1374 aa8.46□□□□□ -1.06
TGFBR1-206ENST00000549021 SHANK3Q9BYB0 1731 aa8.46□□□□□ -1.06
TGFBR1-206ENST00000549021 GNAT3A8MTJ3 354 aa8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 CHL1O00533 1208 aa8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 BCAR3O75815 825 aa8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 DPYDQ12882 1025 aa8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 CBLBQ13191 982 aa8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 DCTN1Q14203 1278 aa8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 CHRNA2Q15822 529 aa8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 AMOTQ4VCS5 1084 aa8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 PLEKHO1Q53GL0 409 aaPredicted RBP8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 SND1Q7KZF4 910 aaKnown RBP eCLIP8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 MCM10Q7L590 875 aa8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 RGS22Q8NE09 1264 aa8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 RTF1Q92541 710 aaKnown RBP8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 ZNF428Q96B54 188 aa8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 MTMR7Q9Y216 660 aa8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 GNEQ9Y223 722 aaKnown RBP8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 COL5A2P05997 1499 aaPredicted RBP8.45□□□□□ -1.06
TGFBR1-206ENST00000549021 NWD2Q9ULI1 1742 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms