RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 GGT6Q6P531 493 aa5.34□□□□□ -1.55
APAF1-208ENST00000549007 ELP3Q9H9T3 547 aa5.34□□□□□ -1.55
APAF1-208ENST00000549007 KIF3BO15066 747 aa5.34□□□□□ -1.55
APAF1-208ENST00000549007 GADD45BO75293 160 aaPredicted RBP5.34□□□□□ -1.55
APAF1-208ENST00000549007 GRIN2CQ14957 1233 aa5.34□□□□□ -1.55
APAF1-208ENST00000549007 HPS1Q92902 700 aa5.34□□□□□ -1.55
APAF1-208ENST00000549007 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.34□□□□□ -1.559e-6■■■■■ 27.7
APAF1-208ENST00000549007 ANKRD30AQ9BXX3 1397 aa5.34□□□□□ -1.55
APAF1-208ENST00000549007 NCOA1Q15788 1441 aa5.34□□□□□ -1.55
APAF1-208ENST00000549007 TTC24A2A3L6 582 aaPredicted RBP5.33□□□□□ -1.56
APAF1-208ENST00000549007 ANKRD62A6NC57 917 aa5.33□□□□□ -1.56
APAF1-208ENST00000549007 CCDC85CA6NKD9 419 aa5.33□□□□□ -1.56
APAF1-208ENST00000549007 GNASQ5JWF2 1037 aa5.33□□□□□ -1.56
APAF1-208ENST00000549007 BTLAQ7Z6A9 289 aa5.33□□□□□ -1.56
APAF1-208ENST00000549007 FBF1Q8TES7 1133 aa5.33□□□□□ -1.56
APAF1-208ENST00000549007 ATP10AO60312 1499 aa5.33□□□□□ -1.56
APAF1-208ENST00000549007 A2MP01023 1474 aa5.33□□□□□ -1.56
APAF1-208ENST00000549007 SHANK2Q9UPX8 1470 aa5.33□□□□□ -1.56
APAF1-208ENST00000549007 ACPPP15309 386 aa5.33□□□□□ -1.56
APAF1-208ENST00000549007 GNL2Q13823 731 aaKnown RBP5.33□□□□□ -1.56
APAF1-208ENST00000549007 NBPF1Q3BBV0 1214 aa5.33□□□□□ -1.56
APAF1-208ENST00000549007 MPNDQ8N594 471 aa5.33□□□□□ -1.56
APAF1-208ENST00000549007 CHRDQ9H2X0 955 aa5.33□□□□□ -1.56
APAF1-208ENST00000549007 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.33□□□□□ -1.56
APAF1-208ENST00000549007 HMGB1P09429 215 aaKnown RBP5.33□□□□□ -1.56
APAF1-208ENST00000549007 INPP5BP32019 993 aa5.33□□□□□ -1.56
APAF1-208ENST00000549007 NLGN1Q8N2Q7 840 aa5.33□□□□□ -1.56
APAF1-208ENST00000549007 ADGBQ8N7X0 1667 aa5.33□□□□□ -1.56
APAF1-208ENST00000549007 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.32□□□□□ -1.56
APAF1-208ENST00000549007 FIGNL2A6NMB9 653 aa5.32□□□□□ -1.56
APAF1-208ENST00000549007 GTF2E1P29083 439 aaPredicted RBP5.32□□□□□ -1.56
APAF1-208ENST00000549007 RNF166Q96A37 237 aaPredicted RBP5.32□□□□□ -1.56
APAF1-208ENST00000549007 GRIP2Q9C0E4 1043 aa5.32□□□□□ -1.56
APAF1-208ENST00000549007 MAGI2Q86UL8 1455 aa5.32□□□□□ -1.56
APAF1-208ENST00000549007 RTEL1-TNFRSF6BF6WH68 1400 aa5.32□□□□□ -1.56
APAF1-208ENST00000549007 GRM2Q14416 872 aa5.32□□□□□ -1.56
APAF1-208ENST00000549007 TAF1CQ15572 869 aaPredicted RBP5.32□□□□□ -1.56
APAF1-208ENST00000549007 POTEGQ6S5H5 508 aa5.32□□□□□ -1.56
APAF1-208ENST00000549007 ZNF654Q8IZM8 581 aa5.32□□□□□ -1.56
APAF1-208ENST00000549007 MEIOBQ8N635 442 aa5.32□□□□□ -1.56
APAF1-208ENST00000549007 SNX29Q8TEQ0 813 aa5.32□□□□□ -1.56
APAF1-208ENST00000549007 ZCCHC2Q9C0B9 1178 aaKnown RBP5.32□□□□□ -1.56
APAF1-208ENST00000549007 RUBCNLQ9H714 662 aa5.32□□□□□ -1.56
APAF1-208ENST00000549007 HCSTQ9UBK5 93 aa5.32□□□□□ -1.56
APAF1-208ENST00000549007 TTF2Q9UNY4 1162 aaKnown RBP5.32□□□□□ -1.56
APAF1-208ENST00000549007 MAST1Q9Y2H9 1570 aa5.32□□□□□ -1.56
APAF1-208ENST00000549007 DHX29Q7Z478 1369 aaKnown RBP5.32□□□□□ -1.56
APAF1-208ENST00000549007 XYLBO75191 536 aa5.32□□□□□ -1.56
APAF1-208ENST00000549007 FGRP09769 529 aa5.32□□□□□ -1.56
APAF1-208ENST00000549007 BMP1P13497 986 aa5.32□□□□□ -1.56
APAF1-208ENST00000549007 CEP63Q96MT8 703 aa5.32□□□□□ -1.56
APAF1-208ENST00000549007 NAIPQ13075 1403 aa5.31□□□□□ -1.56
APAF1-208ENST00000549007 FAM160A1Q05DH4 1040 aa5.31□□□□□ -1.56
APAF1-208ENST00000549007 JAZF1Q86VZ6 243 aa5.31□□□□□ -1.56
APAF1-208ENST00000549007 ZFYVE28Q9HCC9 887 aa5.31□□□□□ -1.56
APAF1-208ENST00000549007 TLR6Q9Y2C9 796 aa5.31□□□□□ -1.56
APAF1-208ENST00000549007 MRPL42Q9Y6G3 142 aaKnown RBP5.31□□□□□ -1.56
APAF1-208ENST00000549007 ADGRL2O95490 1459 aa5.31□□□□□ -1.56
APAF1-208ENST00000549007 ANKRD50Q9ULJ7 1429 aa5.31□□□□□ -1.56
APAF1-208ENST00000549007 FGD1P98174 961 aa5.31□□□□□ -1.56
APAF1-208ENST00000549007 RAB44Q7Z6P3 723 aaPredicted RBP5.31□□□□□ -1.56
APAF1-208ENST00000549007 TRIM52Q96A61 297 aa5.31□□□□□ -1.56
APAF1-208ENST00000549007 PLXNC1O60486 1568 aa5.31□□□□□ -1.56
APAF1-208ENST00000549007 ATF4P18848 351 aaPredicted RBP5.31□□□□□ -1.56
APAF1-208ENST00000549007 CEBPAP49715 358 aaPredicted RBP5.31□□□□□ -1.56
APAF1-208ENST00000549007 ARSDP51689 593 aa5.31□□□□□ -1.56
APAF1-208ENST00000549007 FCGRTP55899 365 aa5.31□□□□□ -1.56
APAF1-208ENST00000549007 LINC00528Q8N1L1 170 aa5.31□□□□□ -1.56
APAF1-208ENST00000549007 DNAJC25Q9H1X3 360 aa5.31□□□□□ -1.56
APAF1-208ENST00000549007 USP31Q70CQ4 1352 aa5.3□□□□□ -1.56
APAF1-208ENST00000549007 METTL12A8MUP2 240 aa5.3□□□□□ -1.56
APAF1-208ENST00000549007 TARSP26639 723 aaKnown RBP5.3□□□□□ -1.56
APAF1-208ENST00000549007 TYRO3Q06418 890 aa5.3□□□□□ -1.56
APAF1-208ENST00000549007 DUOX2Q9NRD8 1548 aa5.3□□□□□ -1.56
APAF1-208ENST00000549007 ROCK1Q13464 1354 aa5.3□□□□□ -1.56
APAF1-208ENST00000549007 SASH3O75995 380 aa5.3□□□□□ -1.56
APAF1-208ENST00000549007 BMP2P12643 396 aa5.3□□□□□ -1.56
APAF1-208ENST00000549007 SMPD1P17405 629 aa5.3□□□□□ -1.56
APAF1-208ENST00000549007 TATP17735 454 aaPredicted RBP5.3□□□□□ -1.56
APAF1-208ENST00000549007 C1orf53Q5VUE5 145 aa5.3□□□□□ -1.56
APAF1-208ENST00000549007 FAM8A1Q9UBU6 413 aa5.3□□□□□ -1.56
APAF1-208ENST00000549007 ADAMTS1Q9UHI8 967 aa5.3□□□□□ -1.56
APAF1-208ENST00000549007 HFM1A2PYH4 1435 aa5.3□□□□□ -1.56
APAF1-208ENST00000549007 CCDC85BQ15834 202 aaPredicted RBP5.29□□□□□ -1.56
APAF1-208ENST00000549007 PEAR1Q5VY43 1037 aaPredicted RBP5.29□□□□□ -1.56
APAF1-208ENST00000549007 CCDC81Q6ZN84 652 aa5.29□□□□□ -1.56
APAF1-208ENST00000549007 SLC43A3Q8NBI5 491 aa5.29□□□□□ -1.56
APAF1-208ENST00000549007 GPRASP2Q96D09 838 aa5.29□□□□□ -1.56
APAF1-208ENST00000549007 HHIPQ96QV1 700 aa5.29□□□□□ -1.56
APAF1-208ENST00000549007 ZIC5Q96T25 663 aa5.29□□□□□ -1.56
APAF1-208ENST00000549007 HIRIP3Q9BW71 556 aaPredicted RBP5.29□□□□□ -1.56
APAF1-208ENST00000549007 AKAP2Q9Y2D5 859 aa5.29□□□□□ -1.56
APAF1-208ENST00000549007 RAB3GAP2Q9H2M9 1393 aa5.29□□□□□ -1.56
APAF1-208ENST00000549007 STK10O94804 968 aaKnown RBP5.29□□□□□ -1.56
APAF1-208ENST00000549007 CES1P23141 567 aa5.29□□□□□ -1.56
APAF1-208ENST00000549007 NBPF10Q6P3W6 841 aaKnown RBP5.29□□□□□ -1.56
APAF1-208ENST00000549007 SNIP1Q8TAD8 396 aaKnown RBP5.29□□□□□ -1.56
APAF1-208ENST00000549007 GMLQ99445 158 aa5.29□□□□□ -1.56
APAF1-208ENST00000549007 ZNF408Q9H9D4 720 aa5.29□□□□□ -1.56
APAF1-208ENST00000549007 TPTE2Q6XPS3 522 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms