RNA–Protein interactions for RNA: ENST00000548979.1

SLC38A1-205, Transcript of solute carrier family 38 member 1, humanhuman

TSL 4

Gene SLC38A1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-205ENST00000548979 SBF2Q86WG5 1849 aa11.32□□□□□ -0.6
SLC38A1-205ENST00000548979 RGPD3A6NKT7 1758 aaPredicted RBP11.32□□□□□ -0.6
SLC38A1-205ENST00000548979 RGPD4Q7Z3J3 1758 aa11.32□□□□□ -0.6
SLC38A1-205ENST00000548979 ATP5J2-PTCD1G3V325 749 aa11.32□□□□□ -0.6
SLC38A1-205ENST00000548979 KCNQ2O43526 872 aa11.32□□□□□ -0.6
SLC38A1-205ENST00000548979 NFX1Q12986 1120 aaKnown RBP11.32□□□□□ -0.6
SLC38A1-205ENST00000548979 LCE2AQ5TA79 106 aaPredicted RBP11.32□□□□□ -0.6
SLC38A1-205ENST00000548979 FOXD4L5Q5VV16 416 aaPredicted RBP11.32□□□□□ -0.6
SLC38A1-205ENST00000548979 ACSBG1Q96GR2 724 aa11.32□□□□□ -0.6
SLC38A1-205ENST00000548979 POLKQ9UBT6 870 aa11.32□□□□□ -0.6
SLC38A1-205ENST00000548979 DOLKQ9UPQ8 538 aa11.32□□□□□ -0.6
SLC38A1-205ENST00000548979 SOX11P35716 441 aa11.31□□□□□ -0.6
SLC38A1-205ENST00000548979 OXLD1Q5BKU9 147 aa11.31□□□□□ -0.6
SLC38A1-205ENST00000548979 SLC27A3Q5K4L6 730 aa11.31□□□□□ -0.6
SLC38A1-205ENST00000548979 MORC1Q86VD1 984 aa11.31□□□□□ -0.6
SLC38A1-205ENST00000548979 POLMQ9NP87 494 aaPredicted RBP11.31□□□□□ -0.6
SLC38A1-205ENST00000548979 STK32BQ9NY57 414 aa11.31□□□□□ -0.6
SLC38A1-205ENST00000548979 SPG7Q9UQ90 795 aa11.31□□□□□ -0.6
SLC38A1-205ENST00000548979 PCDH11XQ9BZA7 1347 aa11.31□□□□□ -0.6
SLC38A1-205ENST00000548979 PCDH11YQ9BZA8 1340 aa11.31□□□□□ -0.6
SLC38A1-205ENST00000548979 KAT6BQ8WYB5 2073 aa11.31□□□□□ -0.6
SLC38A1-205ENST00000548979 A0A1W2PRU2 124 aa11.3□□□□□ -0.6
SLC38A1-205ENST00000548979 TERTO14746 1132 aaKnown RBP11.3□□□□□ -0.6
SLC38A1-205ENST00000548979 HDGFL1Q5TGJ6 251 aa11.3□□□□□ -0.6
SLC38A1-205ENST00000548979 PTF1AQ7RTS3 328 aa11.3□□□□□ -0.6
SLC38A1-205ENST00000548979 SPON1Q9HCB6 807 aa11.3□□□□□ -0.6
SLC38A1-205ENST00000548979 RAB6BQ9NRW1 208 aa11.3□□□□□ -0.6
SLC38A1-205ENST00000548979 RREB1Q92766 1687 aa11.3□□□□□ -0.6
SLC38A1-205ENST00000548979 PLEKHG2Q9H7P9 1386 aa11.29□□□□□ -0.6
SLC38A1-205ENST00000548979 LRP5O75197 1615 aa11.29□□□□□ -0.6
SLC38A1-205ENST00000548979 TNNT2P45379 298 aaPredicted RBP11.29□□□□□ -0.6
SLC38A1-205ENST00000548979 WWC1Q8IX03 1113 aa11.29□□□□□ -0.6
SLC38A1-205ENST00000548979 USHBP1Q8N6Y0 703 aa11.29□□□□□ -0.6
SLC38A1-205ENST00000548979 PLPP7Q8NBV4 271 aa11.29□□□□□ -0.6
SLC38A1-205ENST00000548979 RNF217Q8TC41 542 aa11.29□□□□□ -0.6
SLC38A1-205ENST00000548979 SYTL4Q96C24 671 aaPredicted RBP11.29□□□□□ -0.6
SLC38A1-205ENST00000548979 KIF7Q2M1P5 1343 aa11.29□□□□□ -0.6
SLC38A1-205ENST00000548979 NHSQ6T4R5 1651 aa11.28□□□□□ -0.6
SLC38A1-205ENST00000548979 SLC15A2Q16348 729 aa11.28□□□□□ -0.6
SLC38A1-205ENST00000548979 TREML4Q6UXN2 200 aa11.28□□□□□ -0.6
SLC38A1-205ENST00000548979 UCN2Q96RP3 112 aa11.28□□□□□ -0.6
SLC38A1-205ENST00000548979 ARHGEF10LQ9HCE6 1279 aa11.28□□□□□ -0.6
SLC38A1-205ENST00000548979 NXF1Q9UBU9 619 aaKnown RBP11.28□□□□□ -0.6
SLC38A1-205ENST00000548979 MEGF6O75095 1541 aa11.28□□□□□ -0.6
SLC38A1-205ENST00000548979 NUP188Q5SRE5 1749 aa11.27□□□□□ -0.61
SLC38A1-205ENST00000548979 A6NJR5 290 aa11.27□□□□□ -0.61
SLC38A1-205ENST00000548979 MEN1O00255 615 aa11.27□□□□□ -0.61
SLC38A1-205ENST00000548979 MAP2P11137 1827 aaKnown RBP11.27□□□□□ -0.61
SLC38A1-205ENST00000548979 EIF4A2Q14240 407 aaKnown RBP11.26□□□□□ -0.61
SLC38A1-205ENST00000548979 NCAPD2Q15021 1401 aa11.26□□□□□ -0.61
SLC38A1-205ENST00000548979 WFS1O76024 890 aa11.25□□□□□ -0.61
SLC38A1-205ENST00000548979 SKIP12755 728 aa11.25□□□□□ -0.61
SLC38A1-205ENST00000548979 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.25□□□□□ -0.61
SLC38A1-205ENST00000548979 AMOTQ4VCS5 1084 aa11.25□□□□□ -0.61
SLC38A1-205ENST00000548979 CYP2U1Q7Z449 544 aa11.25□□□□□ -0.61
SLC38A1-205ENST00000548979 IFNL2Q8IZJ0 200 aa11.25□□□□□ -0.61
SLC38A1-205ENST00000548979 SMARCC1Q92922 1105 aaPredicted RBP11.25□□□□□ -0.61
SLC38A1-205ENST00000548979 PPP1R1BQ9UD71 204 aaPredicted RBP11.25□□□□□ -0.61
SLC38A1-205ENST00000548979 ANKRD26Q9UPS8 1709 aa11.25□□□□□ -0.61
SLC38A1-205ENST00000548979 CYP27B1O15528 508 aa11.24□□□□□ -0.61
SLC38A1-205ENST00000548979 MYCP01106 439 aaPredicted RBP11.24□□□□□ -0.61
SLC38A1-205ENST00000548979 IL2RAP01589 272 aa11.24□□□□□ -0.61
SLC38A1-205ENST00000548979 HSP90AB1P08238 724 aaKnown RBP11.24□□□□□ -0.61
SLC38A1-205ENST00000548979 PTSQ03393 145 aa11.24□□□□□ -0.61
SLC38A1-205ENST00000548979 PLEKHO1Q53GL0 409 aaPredicted RBP11.24□□□□□ -0.61
SLC38A1-205ENST00000548979 TBC1D9Q6ZT07 1266 aa11.24□□□□□ -0.61
SLC38A1-205ENST00000548979 DEPDC4Q8N2C3 294 aa11.24□□□□□ -0.61
SLC38A1-205ENST00000548979 IGSF1Q8N6C5 1336 aa11.24□□□□□ -0.61
SLC38A1-205ENST00000548979 RGPD2P0DJD1 1756 aa11.23□□□□□ -0.61
SLC38A1-205ENST00000548979 USP4Q13107 963 aa11.23□□□□□ -0.61
SLC38A1-205ENST00000548979 PRICKLE2Q7Z3G6 844 aa11.23□□□□□ -0.61
SLC38A1-205ENST00000548979 SLC16A10Q8TF71 515 aa11.23□□□□□ -0.61
SLC38A1-205ENST00000548979 GLMNQ92990 594 aa11.23□□□□□ -0.61
SLC38A1-205ENST00000548979 MTFR1LQ9H019 292 aa11.23□□□□□ -0.61
SLC38A1-205ENST00000548979 GTF3C3Q9Y5Q9 886 aa11.23□□□□□ -0.61
SLC38A1-205ENST00000548979 NPC1L1Q9UHC9 1359 aa11.23□□□□□ -0.61
SLC38A1-205ENST00000548979 BTAF1O14981 1849 aa11.22□□□□□ -0.61
SLC38A1-205ENST00000548979 RNF144AP50876 292 aaPredicted RBP11.22□□□□□ -0.61
SLC38A1-205ENST00000548979 CLN3Q13286 438 aa11.22□□□□□ -0.61
SLC38A1-205ENST00000548979 ERBB4Q15303 1308 aa11.22□□□□□ -0.61
SLC38A1-205ENST00000548979 MAP7D1Q3KQU3 841 aa11.22□□□□□ -0.61
SLC38A1-205ENST00000548979 MPRIPQ6WCQ1 1025 aa11.22□□□□□ -0.61
SLC38A1-205ENST00000548979 LRRC4BQ9NT99 713 aa11.22□□□□□ -0.61
SLC38A1-205ENST00000548979 CCNL1Q9UK58 526 aaPredicted RBP11.22□□□□□ -0.61
SLC38A1-205ENST00000548979 SENP3-EIF4A1A0A087X0R7 540 aa11.21□□□□□ -0.61
SLC38A1-205ENST00000548979 H3BM21 787 aa11.21□□□□□ -0.61
SLC38A1-205ENST00000548979 PPFIA3O75145 1194 aa11.21□□□□□ -0.61
SLC38A1-205ENST00000548979 PHKG2P15735 406 aa11.21□□□□□ -0.61
SLC38A1-205ENST00000548979 RHOQP17081 205 aa11.21□□□□□ -0.61
SLC38A1-205ENST00000548979 TMOD3Q9NYL9 352 aa11.21□□□□□ -0.61
SLC38A1-205ENST00000548979 TFCP2L1Q9NZI6 479 aa11.21□□□□□ -0.61
SLC38A1-205ENST00000548979 ERVV-2B6SEH9 535 aa11.2□□□□□ -0.62
SLC38A1-205ENST00000548979 GNRH1P01148 92 aa11.2□□□□□ -0.62
SLC38A1-205ENST00000548979 IL13P35225 146 aa11.2□□□□□ -0.62
SLC38A1-205ENST00000548979 MTHFSP49914 203 aa11.2□□□□□ -0.62
SLC38A1-205ENST00000548979 NCOA4Q13772 614 aa11.2□□□□□ -0.62
SLC38A1-205ENST00000548979 C1orf141Q5JVX7 400 aa11.2□□□□□ -0.62
SLC38A1-205ENST00000548979 FLAD1Q8NFF5 587 aa11.2□□□□□ -0.62
SLC38A1-205ENST00000548979 CNKSR1Q969H4 720 aa11.2□□□□□ -0.62
SLC38A1-205ENST00000548979 DCAF5Q96JK2 942 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms