RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 NAA16Q6N069 864 aaPredicted RBP16.05■□□□□ 0.16
HDAC7-228ENST00000548938 NBPF11Q86T75 865 aa16.05■□□□□ 0.16
HDAC7-228ENST00000548938 CEP57L1Q8IYX8 460 aa16.05■□□□□ 0.16
HDAC7-228ENST00000548938 NPHP1O15259 732 aa16.05■□□□□ 0.16
HDAC7-228ENST00000548938 PFKFB2O60825 505 aa16.05■□□□□ 0.16
HDAC7-228ENST00000548938 SLU7O95391 586 aaKnown RBP16.05■□□□□ 0.16
HDAC7-228ENST00000548938 ST7Q9NRC1 585 aa16.05■□□□□ 0.16
HDAC7-228ENST00000548938 U3KPZ7 1027 aaPredicted RBP16.05■□□□□ 0.16
HDAC7-228ENST00000548938 MYH15Q9Y2K3 1946 aa16.05■□□□□ 0.16
HDAC7-228ENST00000548938 ME1P48163 572 aa16.04■□□□□ 0.16
HDAC7-228ENST00000548938 GUCY1B3Q02153 619 aa16.04■□□□□ 0.16
HDAC7-228ENST00000548938 DNAJC2Q99543 621 aaKnown RBP16.04■□□□□ 0.16
HDAC7-228ENST00000548938 HEG1Q9ULI3 1381 aa16.04■□□□□ 0.16
HDAC7-228ENST00000548938 APOBRQ0VD83 1088 aa16.04■□□□□ 0.16
HDAC7-228ENST00000548938 AMOTQ4VCS5 1084 aa16.04■□□□□ 0.16
HDAC7-228ENST00000548938 ZNF446Q9NWS9 450 aa16.04■□□□□ 0.16
HDAC7-228ENST00000548938 FAM53CQ9NYF3 392 aa16.04■□□□□ 0.16
HDAC7-228ENST00000548938 ATP5JP18859 108 aa16.03■□□□□ 0.16
HDAC7-228ENST00000548938 CCT2P78371 535 aaKnown RBP16.03■□□□□ 0.16
HDAC7-228ENST00000548938 CHRNA2Q15822 529 aa16.03■□□□□ 0.16
HDAC7-228ENST00000548938 SYTL4Q96C24 671 aaPredicted RBP16.03■□□□□ 0.16
HDAC7-228ENST00000548938 LLPHQ9BRT6 129 aaKnown RBP16.03■□□□□ 0.16
HDAC7-228ENST00000548938 NCOA5Q9HCD5 579 aaKnown RBP16.03■□□□□ 0.16
HDAC7-228ENST00000548938 DDX58O95786 925 aaKnown RBP16.03■□□□□ 0.16
HDAC7-228ENST00000548938 TAF3Q5VWG9 929 aa16.03■□□□□ 0.16
HDAC7-228ENST00000548938 ILDR1Q86SU0 546 aaPredicted RBP16.03■□□□□ 0.16
HDAC7-228ENST00000548938 RGPD5Q99666 1765 aa16.03■□□□□ 0.16
HDAC7-228ENST00000548938 SLFNL1Q499Z3 407 aa16.03■□□□□ 0.16
HDAC7-228ENST00000548938 C1orf141Q5JVX7 400 aa16.03■□□□□ 0.16
HDAC7-228ENST00000548938 E4F1Q66K89 784 aaPredicted RBP16.03■□□□□ 0.16
HDAC7-228ENST00000548938 DDX46Q7L014 1031 aaKnown RBP16.03■□□□□ 0.16
HDAC7-228ENST00000548938 LRRN4CLQ8ND94 238 aa16.03■□□□□ 0.16
HDAC7-228ENST00000548938 KCND1Q9NSA2 647 aa16.03■□□□□ 0.16
HDAC7-228ENST00000548938 GSDMDP57764 484 aa16.02■□□□□ 0.16
HDAC7-228ENST00000548938 TFCP2Q12800 502 aa16.02■□□□□ 0.16
HDAC7-228ENST00000548938 TNNI3KQ59H18 835 aa16.02■□□□□ 0.16
HDAC7-228ENST00000548938 RIC3Q7Z5B4 369 aa16.02■□□□□ 0.16
HDAC7-228ENST00000548938 OSBPL5Q9H0X9 879 aaPredicted RBP16.02■□□□□ 0.16
HDAC7-228ENST00000548938 DDX21Q9NR30 783 aaKnown RBP eCLIP16.02■□□□□ 0.16
HDAC7-228ENST00000548938 FPGT-TNNI3KV9GXZ4 949 aa16.02■□□□□ 0.16
HDAC7-228ENST00000548938 PDIA6Q15084 440 aa16.02■□□□□ 0.15
HDAC7-228ENST00000548938 MCMDC2Q4G0Z9 681 aa16.02■□□□□ 0.15
HDAC7-228ENST00000548938 ZNF396Q96N95 335 aaPredicted RBP16.02■□□□□ 0.15
HDAC7-228ENST00000548938 NLRP2Q9NX02 1062 aa16.02■□□□□ 0.15
HDAC7-228ENST00000548938 CAMTA1Q9Y6Y1 1673 aa16.01■□□□□ 0.15
HDAC7-228ENST00000548938 NEURL1BA8MQ27 555 aa16.01■□□□□ 0.15
HDAC7-228ENST00000548938 DPCR1Q3MIW9 517 aa16.01■□□□□ 0.15
HDAC7-228ENST00000548938 PPP1R13BQ96KQ4 1090 aa16.01■□□□□ 0.15
HDAC7-228ENST00000548938 NAP1L2Q9ULW6 460 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-228ENST00000548938 ERCC6LQ2NKX8 1250 aa16.01■□□□□ 0.15
HDAC7-228ENST00000548938 ARMCX5Q6P1M9 558 aa16.01■□□□□ 0.15
HDAC7-228ENST00000548938 DHX32Q7L7V1 743 aaKnown RBP16.01■□□□□ 0.15
HDAC7-228ENST00000548938 FMR1NBQ8N0W7 255 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-228ENST00000548938 MRPS27Q92552 414 aaKnown RBP16.01■□□□□ 0.15
HDAC7-228ENST00000548938 DBNDD2Q9BQY9 259 aa16.01■□□□□ 0.15
HDAC7-228ENST00000548938 NAT10Q9H0A0 1025 aaKnown RBP16.01■□□□□ 0.15
HDAC7-228ENST00000548938 SOS2Q07890 1332 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-228ENST00000548938 A0A1B0GVL5 298 aa16■□□□□ 0.15
HDAC7-228ENST00000548938 KIF2AO00139 706 aaPredicted RBP16■□□□□ 0.15
HDAC7-228ENST00000548938 SYT10Q6XYQ8 523 aa16■□□□□ 0.15
HDAC7-228ENST00000548938 SDF4Q9BRK5 362 aa16■□□□□ 0.15
HDAC7-228ENST00000548938 XPO4Q9C0E2 1151 aaKnown RBP16■□□□□ 0.15
HDAC7-228ENST00000548938 PCDHA7Q9UN72 937 aa16■□□□□ 0.15
HDAC7-228ENST00000548938 CCDC9Q9Y3X0 531 aaKnown RBP16■□□□□ 0.15
HDAC7-228ENST00000548938 A0A0G2JLW4 131 aa16■□□□□ 0.15
HDAC7-228ENST00000548938 SMC2O95347 1197 aa16■□□□□ 0.15
HDAC7-228ENST00000548938 GCKRQ14397 625 aa16■□□□□ 0.15
HDAC7-228ENST00000548938 TMC6Q7Z403 805 aa16■□□□□ 0.15
HDAC7-228ENST00000548938 L2HGDHQ9H9P8 463 aa16■□□□□ 0.15
HDAC7-228ENST00000548938 SALL1Q9NSC2 1324 aa16■□□□□ 0.15
HDAC7-228ENST00000548938 COL18A1P39060 1754 aa15.99■□□□□ 0.15
HDAC7-228ENST00000548938 MYL6BP14649 208 aa15.99■□□□□ 0.15
HDAC7-228ENST00000548938 MYD88Q99836 296 aa15.99■□□□□ 0.15
HDAC7-228ENST00000548938 IFNKQ9P0W0 207 aa15.99■□□□□ 0.15
HDAC7-228ENST00000548938 RFX7Q2KHR2 1363 aa15.99■□□□□ 0.15
HDAC7-228ENST00000548938 ABCC6O95255 1503 aa15.99■□□□□ 0.15
HDAC7-228ENST00000548938 H2AFXP16104 143 aaPredicted RBP15.99■□□□□ 0.15
HDAC7-228ENST00000548938 NDUFA8P51970 172 aa15.99■□□□□ 0.15
HDAC7-228ENST00000548938 PTPN12Q05209 780 aaKnown RBP15.99■□□□□ 0.15
HDAC7-228ENST00000548938 LAMA4Q16363 1823 aa15.99■□□□□ 0.15
HDAC7-228ENST00000548938 COPRSQ9NQ92 184 aa15.99■□□□□ 0.15
HDAC7-228ENST00000548938 IMPACTQ9P2X3 320 aa15.99■□□□□ 0.15
HDAC7-228ENST00000548938 CPDO75976 1380 aa15.98■□□□□ 0.15
HDAC7-228ENST00000548938 RFX5P48382 616 aaPredicted RBP15.98■□□□□ 0.15
HDAC7-228ENST00000548938 NEXNQ0ZGT2 675 aa15.98■□□□□ 0.15
HDAC7-228ENST00000548938 ATL3Q6DD88 541 aa15.98■□□□□ 0.15
HDAC7-228ENST00000548938 HAUS7Q99871 368 aa15.98■□□□□ 0.15
HDAC7-228ENST00000548938 NEDD4P46934 1319 aa15.98■□□□□ 0.15
HDAC7-228ENST00000548938 ERICH4A6NGS2 130 aa15.98■□□□□ 0.15
HDAC7-228ENST00000548938 HMGB1P09429 215 aaKnown RBP15.98■□□□□ 0.15
HDAC7-228ENST00000548938 CSB-PGBD3P0DP91 1061 aa15.98■□□□□ 0.15
HDAC7-228ENST00000548938 CHST3Q7LGC8 479 aa15.98■□□□□ 0.15
HDAC7-228ENST00000548938 CARMIL3Q8ND23 1372 aa15.97■□□□□ 0.15
HDAC7-228ENST00000548938 SFPQP23246 707 aaKnown RBP eCLIP15.97■□□□□ 0.15
HDAC7-228ENST00000548938 CCDC150Q8NCX0 1101 aa15.97■□□□□ 0.15
HDAC7-228ENST00000548938 XAGE3Q8WTP9 111 aa15.97■□□□□ 0.15
HDAC7-228ENST00000548938 RAPGEF4Q8WZA2 1011 aa15.97■□□□□ 0.15
HDAC7-228ENST00000548938 FMNL2Q96PY5 1086 aa15.97■□□□□ 0.15
HDAC7-228ENST00000548938 BIN1O00499 593 aa15.97■□□□□ 0.15
HDAC7-228ENST00000548938 EXOSC10Q01780 885 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms