RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 LMBR1LQ6UX01 489 aa6.29□□□□□ -1.4
APP-217ENST00000548570 KLHDC4Q8TBB5 520 aa6.29□□□□□ -1.4
APP-217ENST00000548570 CELF1Q92879 486 aaKnown RBP6.29□□□□□ -1.4
APP-217ENST00000548570 WNT2BQ93097 391 aa6.29□□□□□ -1.4
APP-217ENST00000548570 NYXQ9GZU5 481 aa6.29□□□□□ -1.4
APP-217ENST00000548570 NRXN2Q9P2S2 1712 aa6.29□□□□□ -1.4
APP-217ENST00000548570 GTF3C3Q9Y5Q9 886 aa6.29□□□□□ -1.4
APP-217ENST00000548570 A0A0G2JLW4 131 aa6.28□□□□□ -1.4
APP-217ENST00000548570 WTIPA6NIX2 430 aaPredicted RBP6.28□□□□□ -1.4
APP-217ENST00000548570 IGHDP01880 384 aa6.28□□□□□ -1.4
APP-217ENST00000548570 GNAI2P04899 355 aa6.28□□□□□ -1.4
APP-217ENST00000548570 GNAI3P08754 354 aa6.28□□□□□ -1.4
APP-217ENST00000548570 POLD1P28340 1107 aa6.28□□□□□ -1.4
APP-217ENST00000548570 ATP8B2P98198 1209 aa6.28□□□□□ -1.4
APP-217ENST00000548570 PTPN12Q05209 780 aaKnown RBP6.28□□□□□ -1.4
APP-217ENST00000548570 OLFM4Q6UX06 510 aa6.28□□□□□ -1.4
APP-217ENST00000548570 SSH3Q8TE77 659 aa6.28□□□□□ -1.4
APP-217ENST00000548570 C7orf43Q8WVR3 580 aa6.28□□□□□ -1.4
APP-217ENST00000548570 ZNF594Q96JF6 807 aaPredicted RBP6.28□□□□□ -1.4
APP-217ENST00000548570 PUS3Q9BZE2 481 aaKnown RBP6.28□□□□□ -1.4
APP-217ENST00000548570 FHDC1Q9C0D6 1143 aaPredicted RBP6.28□□□□□ -1.4
APP-217ENST00000548570 PA2G4Q9UQ80 394 aaKnown RBP6.28□□□□□ -1.4
APP-217ENST00000548570 CD2APQ9Y5K6 639 aa6.28□□□□□ -1.4
APP-217ENST00000548570 RTL9Q8NET4 1388 aa6.28□□□□□ -1.4
APP-217ENST00000548570 SNED1Q8TER0 1413 aa6.27□□□□□ -1.41
APP-217ENST00000548570 ITGA6P23229 1130 aa6.27□□□□□ -1.41
APP-217ENST00000548570 ST5P78524 1137 aa6.27□□□□□ -1.41
APP-217ENST00000548570 THSD4Q6ZMP0 1018 aa6.27□□□□□ -1.41
APP-217ENST00000548570 ATG9AQ7Z3C6 839 aa6.27□□□□□ -1.41
APP-217ENST00000548570 C2CD5Q86YS7 1000 aa6.27□□□□□ -1.41
APP-217ENST00000548570 NLRP3Q96P20 1036 aa6.27□□□□□ -1.41
APP-217ENST00000548570 SYT17Q9BSW7 474 aa6.27□□□□□ -1.41
APP-217ENST00000548570 KIAA1551Q9HCM1 1747 aa6.26□□□□□ -1.41
APP-217ENST00000548570 SNAP23O00161 211 aa6.26□□□□□ -1.41
APP-217ENST00000548570 SRGAP3O43295 1099 aa6.26□□□□□ -1.41
APP-217ENST00000548570 SASH1O94885 1247 aa6.26□□□□□ -1.41
APP-217ENST00000548570 GTF2E1P29083 439 aaPredicted RBP6.26□□□□□ -1.41
APP-217ENST00000548570 PDE6BP35913 854 aa6.26□□□□□ -1.41
APP-217ENST00000548570 PRELPP51888 382 aa6.26□□□□□ -1.41
APP-217ENST00000548570 TGFB2P61812 414 aa6.26□□□□□ -1.41
APP-217ENST00000548570 LRRC24Q50LG9 513 aa6.26□□□□□ -1.41
APP-217ENST00000548570 STYK1Q6J9G0 422 aa6.26□□□□□ -1.41
APP-217ENST00000548570 RPAP2Q8IXW5 612 aaPredicted RBP6.26□□□□□ -1.41
APP-217ENST00000548570 CRAMP1Q96RY5 1269 aa6.26□□□□□ -1.41
APP-217ENST00000548570 COPRSQ9NQ92 184 aa6.26□□□□□ -1.41
APP-217ENST00000548570 WWC3Q9ULE0 1092 aa6.26□□□□□ -1.41
APP-217ENST00000548570 NOP58Q9Y2X3 529 aaKnown RBP6.26□□□□□ -1.41
APP-217ENST00000548570 RIPOR2Q9Y4F9 1068 aa6.26□□□□□ -1.41
APP-217ENST00000548570 KDM2BQ8NHM5 1336 aa6.25□□□□□ -1.41
APP-217ENST00000548570 IRS2Q9Y4H2 1338 aa6.25□□□□□ -1.41
APP-217ENST00000548570 LRP5O75197 1615 aa6.25□□□□□ -1.41
APP-217ENST00000548570 NPR1P16066 1061 aa6.25□□□□□ -1.41
APP-217ENST00000548570 RPS8P62241 208 aaKnown RBP6.25□□□□□ -1.41
APP-217ENST00000548570 HDAC1Q13547 482 aaPredicted RBP6.25□□□□□ -1.41
APP-217ENST00000548570 GRAPQ13588 217 aa6.25□□□□□ -1.41
APP-217ENST00000548570 CCDC152Q4G0S7 254 aa6.25□□□□□ -1.41
APP-217ENST00000548570 PRPF40BQ6NWY9 871 aaKnown RBP6.25□□□□□ -1.41
APP-217ENST00000548570 VGLL2Q8N8G2 317 aa6.25□□□□□ -1.41
APP-217ENST00000548570 GRAPLQ8TC17 118 aaPredicted RBP6.25□□□□□ -1.41
APP-217ENST00000548570 MASTLQ96GX5 879 aa6.25□□□□□ -1.41
APP-217ENST00000548570 DCTPP1Q9H773 170 aa6.25□□□□□ -1.41
APP-217ENST00000548570 PPP1R1BQ9UD71 204 aaPredicted RBP6.25□□□□□ -1.41
APP-217ENST00000548570 N4BP2Q86UW6 1770 aaPredicted RBP6.25□□□□□ -1.41
APP-217ENST00000548570 KAT6BQ8WYB5 2073 aa6.25□□□□□ -1.41
APP-217ENST00000548570 NUP98P52948 1817 aa6.25□□□□□ -1.41
APP-217ENST00000548570 DDX60Q8IY21 1712 aaKnown RBP6.25□□□□□ -1.41
APP-217ENST00000548570 ANKRD36CQ5JPF3 1778 aa6.24□□□□□ -1.41
APP-217ENST00000548570 GOLGB1Q14789 3259 aaKnown RBP6.24□□□□□ -1.41
APP-217ENST00000548570 H0YIN7 160 aa6.24□□□□□ -1.41
APP-217ENST00000548570 YBX3P16989 372 aaKnown RBP eCLIP6.24□□□□□ -1.41
APP-217ENST00000548570 KLRK1P26718 216 aa6.24□□□□□ -1.41
APP-217ENST00000548570 IFIT5Q13325 482 aaKnown RBP6.24□□□□□ -1.41
APP-217ENST00000548570 SKAP1Q86WV1 359 aa6.24□□□□□ -1.41
APP-217ENST00000548570 OXER1Q8TDS5 423 aa6.24□□□□□ -1.41
APP-217ENST00000548570 RBM17Q96I25 401 aaKnown RBP6.24□□□□□ -1.41
APP-217ENST00000548570 BSDC1Q9NW68 430 aaPredicted RBP6.24□□□□□ -1.41
APP-217ENST00000548570 MINPP1Q9UNW1 487 aa6.24□□□□□ -1.41
APP-217ENST00000548570 EXOC6BQ9Y2D4 811 aa6.24□□□□□ -1.41
APP-217ENST00000548570 CHMP3Q9Y3E7 222 aa6.24□□□□□ -1.41
APP-217ENST00000548570 ATP6V0A2Q9Y487 856 aa6.24□□□□□ -1.41
APP-217ENST00000548570 ANKRD31Q8N7Z5 1873 aa6.24□□□□□ -1.41
APP-217ENST00000548570 COL11A2P13942 1736 aaPredicted RBP6.23□□□□□ -1.41
APP-217ENST00000548570 ANKRD18BA2A2Z9 1011 aa6.23□□□□□ -1.41
APP-217ENST00000548570 BHMG1C9JSJ3 638 aaPredicted RBP6.23□□□□□ -1.41
APP-217ENST00000548570 EYA2O00167 538 aa6.23□□□□□ -1.41
APP-217ENST00000548570 PPEF1O14829 653 aaPredicted RBP6.23□□□□□ -1.41
APP-217ENST00000548570 NPHP1O15259 732 aa6.23□□□□□ -1.41
APP-217ENST00000548570 C21orf2O43822 256 aa6.23□□□□□ -1.41
APP-217ENST00000548570 TAF5LO75529 589 aa6.23□□□□□ -1.41
APP-217ENST00000548570 BBOX1O75936 387 aa6.23□□□□□ -1.41
APP-217ENST00000548570 CIAO1O76071 339 aa6.23□□□□□ -1.41
APP-217ENST00000548570 GPSM2P81274 684 aa6.23□□□□□ -1.41
APP-217ENST00000548570 CHRNDQ07001 517 aa6.23□□□□□ -1.41
APP-217ENST00000548570 AAMPQ13685 434 aa6.23□□□□□ -1.41
APP-217ENST00000548570 CCDC57Q2TAC2 916 aa6.23□□□□□ -1.41
APP-217ENST00000548570 B4GALNT3Q6L9W6 998 aa6.23□□□□□ -1.41
APP-217ENST00000548570 DDX46Q7L014 1031 aaKnown RBP6.23□□□□□ -1.41
APP-217ENST00000548570 TXNRD3Q86VQ6 643 aa6.23□□□□□ -1.41
APP-217ENST00000548570 SMC5Q8IY18 1101 aa6.23□□□□□ -1.41
APP-217ENST00000548570 TTLL6Q8N841 843 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms