RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 COL19A1Q14993 1142 aa7.42□□□□□ -1.22
DEPDC4-205ENST00000548313 C8orf86Q6ZUL3 223 aa7.42□□□□□ -1.22
DEPDC4-205ENST00000548313 SPACA7Q96KW9 195 aa7.42□□□□□ -1.22
DEPDC4-205ENST00000548313 NIF3L1Q9GZT8 377 aa7.42□□□□□ -1.22
DEPDC4-205ENST00000548313 RBSNQ9H1K0 784 aa7.42□□□□□ -1.22
DEPDC4-205ENST00000548313 BTBD11A6QL63 1104 aa7.41□□□□□ -1.22
DEPDC4-205ENST00000548313 LILRB5O75023 590 aa7.41□□□□□ -1.22
DEPDC4-205ENST00000548313 CPNE3O75131 537 aaKnown RBP7.41□□□□□ -1.22
DEPDC4-205ENST00000548313 C20orf204Q6ZNR8 217 aa7.41□□□□□ -1.22
DEPDC4-205ENST00000548313 FAM35AQ86V20 835 aa7.41□□□□□ -1.22
DEPDC4-205ENST00000548313 TXNRD3Q86VQ6 643 aa7.41□□□□□ -1.22
DEPDC4-205ENST00000548313 TTC9Q92623 222 aa7.41□□□□□ -1.22
DEPDC4-205ENST00000548313 LENG1Q96BZ8 264 aaPredicted RBP7.41□□□□□ -1.22
DEPDC4-205ENST00000548313 CHRDQ9H2X0 955 aa7.41□□□□□ -1.22
DEPDC4-205ENST00000548313 FRRS1LQ9P0K9 344 aa7.41□□□□□ -1.22
DEPDC4-205ENST00000548313 SALL4Q9UJQ4 1053 aa7.41□□□□□ -1.22
DEPDC4-205ENST00000548313 FOXD3Q9UJU5 478 aaPredicted RBP7.41□□□□□ -1.22
DEPDC4-205ENST00000548313 AMOTL2Q9Y2J4 779 aa7.41□□□□□ -1.22
DEPDC4-205ENST00000548313 GHRHP01286 108 aa7.4□□□□□ -1.22
DEPDC4-205ENST00000548313 CYP2E1P05181 493 aaPredicted RBP7.4□□□□□ -1.22
DEPDC4-205ENST00000548313 EDN3P14138 238 aa7.4□□□□□ -1.22
DEPDC4-205ENST00000548313 MBTPS1Q14703 1052 aa7.4□□□□□ -1.22
DEPDC4-205ENST00000548313 DNAJC14Q6Y2X3 702 aaPredicted RBP7.4□□□□□ -1.22
DEPDC4-205ENST00000548313 NSUN5Q96P11 429 aaKnown RBP7.4□□□□□ -1.22
DEPDC4-205ENST00000548313 ANKRD33BA6NCL7 494 aa7.39□□□□□ -1.23
DEPDC4-205ENST00000548313 HYAL3O43820 417 aaPredicted RBP7.39□□□□□ -1.23
DEPDC4-205ENST00000548313 CPB1P15086 417 aa7.39□□□□□ -1.23
DEPDC4-205ENST00000548313 RAC1P63000 192 aa7.39□□□□□ -1.23
DEPDC4-205ENST00000548313 MLLT1Q03111 559 aaPredicted RBP7.39□□□□□ -1.23
DEPDC4-205ENST00000548313 ELMSAN1Q6PJG2 1045 aa7.39□□□□□ -1.23
DEPDC4-205ENST00000548313 NCAPG2Q86XI2 1143 aa7.39□□□□□ -1.23
DEPDC4-205ENST00000548313 CEP120Q8N960 986 aa7.39□□□□□ -1.23
DEPDC4-205ENST00000548313 CSRNP1Q96S65 589 aa7.39□□□□□ -1.23
DEPDC4-205ENST00000548313 A0A0A0MRY4 1105 aa7.38□□□□□ -1.23
DEPDC4-205ENST00000548313 J3QW42 95 aa7.38□□□□□ -1.23
DEPDC4-205ENST00000548313 EIF1AYO14602 144 aaKnown RBP7.38□□□□□ -1.23
DEPDC4-205ENST00000548313 EREGO14944 169 aa7.38□□□□□ -1.23
DEPDC4-205ENST00000548313 RGS9O75916 674 aaPredicted RBP7.38□□□□□ -1.23
DEPDC4-205ENST00000548313 SELPP16109 830 aa7.38□□□□□ -1.23
DEPDC4-205ENST00000548313 EIF2AK2P19525 551 aaKnown RBP7.38□□□□□ -1.23
DEPDC4-205ENST00000548313 FMR1Q06787 632 aaKnown RBP eCLIP7.38□□□□□ -1.23
DEPDC4-205ENST00000548313 ORC1Q13415 861 aa7.38□□□□□ -1.23
DEPDC4-205ENST00000548313 PERM1Q5SV97 790 aa7.38□□□□□ -1.23
DEPDC4-205ENST00000548313 COL13A1Q5TAT6 717 aaPredicted RBP7.38□□□□□ -1.23
DEPDC4-205ENST00000548313 PSAPL1Q6NUJ1 521 aa7.38□□□□□ -1.23
DEPDC4-205ENST00000548313 HFE2Q6ZVN8 426 aa7.38□□□□□ -1.23
DEPDC4-205ENST00000548313 GALNT12Q8IXK2 581 aa7.38□□□□□ -1.23
DEPDC4-205ENST00000548313 NAGPAQ9UK23 515 aa7.38□□□□□ -1.23
DEPDC4-205ENST00000548313 FGD1P98174 961 aa7.37□□□□□ -1.23
DEPDC4-205ENST00000548313 ENOX2Q16206 610 aaKnown RBP7.37□□□□□ -1.23
DEPDC4-205ENST00000548313 CACTIN-AS1Q8N1I8 211 aa7.37□□□□□ -1.23
DEPDC4-205ENST00000548313 PLD4Q96BZ4 506 aa7.37□□□□□ -1.23
DEPDC4-205ENST00000548313 LPIN3Q9BQK8 851 aa7.37□□□□□ -1.23
DEPDC4-205ENST00000548313 KANSL3Q9P2N6 904 aa7.37□□□□□ -1.23
DEPDC4-205ENST00000548313 MFAP1P55081 439 aaKnown RBP7.36□□□□□ -1.23
DEPDC4-205ENST00000548313 TP53INP1Q96A56 240 aa7.36□□□□□ -1.23
DEPDC4-205ENST00000548313 SMG9Q9H0W8 520 aaKnown RBP7.36□□□□□ -1.23
DEPDC4-205ENST00000548313 GOLGA2P5Q9HBQ8 144 aa7.36□□□□□ -1.23
DEPDC4-205ENST00000548313 SMNDC1O75940 238 aaKnown RBP eCLIP7.35□□□□□ -1.23
DEPDC4-205ENST00000548313 FBF1Q8TES7 1133 aa7.35□□□□□ -1.23
DEPDC4-205ENST00000548313 CCDC74AQ96AQ1 378 aa7.35□□□□□ -1.23
DEPDC4-205ENST00000548313 PBX4Q9BYU1 374 aa7.35□□□□□ -1.23
DEPDC4-205ENST00000548313 JPH1Q9HDC5 661 aaPredicted RBP7.35□□□□□ -1.23
DEPDC4-205ENST00000548313 PNMA6FA0A0J9YX94 578 aa7.34□□□□□ -1.23
DEPDC4-205ENST00000548313 MAPK8P45983 427 aa7.34□□□□□ -1.23
DEPDC4-205ENST00000548313 ATP2B2Q01814 1243 aa7.34□□□□□ -1.23
DEPDC4-205ENST00000548313 USPL1Q5W0Q7 1092 aa7.34□□□□□ -1.23
DEPDC4-205ENST00000548313 ALG1LQ6GMV1 187 aa7.34□□□□□ -1.23
DEPDC4-205ENST00000548313 NPAS4Q8IUM7 802 aa7.34□□□□□ -1.23
DEPDC4-205ENST00000548313 NUDT8Q8WV74 236 aa7.34□□□□□ -1.23
DEPDC4-205ENST00000548313 DZANK1Q9NVP4 752 aa7.34□□□□□ -1.23
DEPDC4-205ENST00000548313 USP21Q9UK80 565 aa7.34□□□□□ -1.23
DEPDC4-205ENST00000548313 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.34□□□□□ -1.23
DEPDC4-205ENST00000548313 POLR3DP05423 398 aaPredicted RBP7.33□□□□□ -1.24
DEPDC4-205ENST00000548313 P4HBP07237 508 aaKnown RBP7.33□□□□□ -1.24
DEPDC4-205ENST00000548313 AFF1P51825 1210 aaKnown RBP7.33□□□□□ -1.24
DEPDC4-205ENST00000548313 EAPPQ56P03 285 aaPredicted RBP7.33□□□□□ -1.24
DEPDC4-205ENST00000548313 KIAA0319Q5VV43 1072 aa7.33□□□□□ -1.24
DEPDC4-205ENST00000548313 OSMRQ99650 979 aa7.33□□□□□ -1.24
DEPDC4-205ENST00000548313 RASSF4Q9H2L5 321 aa7.33□□□□□ -1.24
DEPDC4-205ENST00000548313 NFKBIEO00221 500 aa7.32□□□□□ -1.24
DEPDC4-205ENST00000548313 PDE2AO00408 941 aaPredicted RBP7.32□□□□□ -1.24
DEPDC4-205ENST00000548313 GRIK5Q16478 980 aa7.32□□□□□ -1.24
DEPDC4-205ENST00000548313 PEAR1Q5VY43 1037 aaPredicted RBP7.32□□□□□ -1.24
DEPDC4-205ENST00000548313 CEP135Q66GS9 1140 aa7.32□□□□□ -1.24
DEPDC4-205ENST00000548313 SHISA2Q6UWI4 295 aa7.32□□□□□ -1.24
DEPDC4-205ENST00000548313 TMEM102Q8N9M5 508 aaPredicted RBP7.32□□□□□ -1.24
DEPDC4-205ENST00000548313 ZKSCAN3Q9BRR0 538 aa7.32□□□□□ -1.24
DEPDC4-205ENST00000548313 SSBP4Q9BWG4 385 aaPredicted RBP7.32□□□□□ -1.24
DEPDC4-205ENST00000548313 NLRP2Q9NX02 1062 aa7.32□□□□□ -1.24
DEPDC4-205ENST00000548313 RNF112Q9ULX5 631 aa7.32□□□□□ -1.24
DEPDC4-205ENST00000548313 CCDC9Q9Y3X0 531 aaKnown RBP7.32□□□□□ -1.24
DEPDC4-205ENST00000548313 A0A1W2PP55 124 aa7.31□□□□□ -1.24
DEPDC4-205ENST00000548313 LDHBP07195 334 aaKnown RBP7.31□□□□□ -1.24
DEPDC4-205ENST00000548313 ATP11AP98196 1134 aa7.31□□□□□ -1.24
DEPDC4-205ENST00000548313 KRTAP19-1Q8IUB9 90 aa7.31□□□□□ -1.24
DEPDC4-205ENST00000548313 FMR1NBQ8N0W7 255 aaPredicted RBP7.31□□□□□ -1.24
DEPDC4-205ENST00000548313 NXPE3Q969Y0 559 aa7.31□□□□□ -1.24
DEPDC4-205ENST00000548313 FRMD6Q96NE9 622 aa7.31□□□□□ -1.24
DEPDC4-205ENST00000548313 POP1Q99575 1024 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms