RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 RBM26Q5T8P6 1007 aaKnown RBP18.22■□□□□ 0.51
SEC23A-204ENST00000548032 SAMD7Q7Z3H4 446 aa18.22■□□□□ 0.51
SEC23A-204ENST00000548032 PODNQ7Z5L7 613 aa18.22■□□□□ 0.51
SEC23A-204ENST00000548032 ANKRD44Q8N8A2 993 aa18.22■□□□□ 0.51
SEC23A-204ENST00000548032 COA1Q9GZY4 146 aa18.22■□□□□ 0.51
SEC23A-204ENST00000548032 USP17L3A6NCW0 530 aa18.21■□□□□ 0.51
SEC23A-204ENST00000548032 USP17L4A6NCW7 530 aa18.21■□□□□ 0.51
SEC23A-204ENST00000548032 RSBN1LQ6PCB5 846 aaPredicted RBP18.21■□□□□ 0.51
SEC23A-204ENST00000548032 USP17L1Q7RTZ2 530 aa18.21■□□□□ 0.51
SEC23A-204ENST00000548032 FRAT1Q92837 279 aaPredicted RBP18.21■□□□□ 0.51
SEC23A-204ENST00000548032 CNTNAP1P78357 1384 aa18.2■□□□□ 0.5
SEC23A-204ENST00000548032 TMEM88BA6NKF7 163 aa18.2■□□□□ 0.5
SEC23A-204ENST00000548032 TRAF5O00463 557 aa18.2■□□□□ 0.5
SEC23A-204ENST00000548032 BCAR3O75815 825 aa18.2■□□□□ 0.5
SEC23A-204ENST00000548032 FMR1Q06787 632 aaKnown RBP eCLIP18.2■□□□□ 0.5
SEC23A-204ENST00000548032 RABL6Q3YEC7 729 aaPredicted RBP18.2■□□□□ 0.5
SEC23A-204ENST00000548032 PUS3Q9BZE2 481 aaKnown RBP18.2■□□□□ 0.5
SEC23A-204ENST00000548032 EGFRP00533 1210 aa18.19■□□□□ 0.5
SEC23A-204ENST00000548032 UBTFL1P0CB47 393 aaPredicted RBP18.19■□□□□ 0.5
SEC23A-204ENST00000548032 MXD3Q9BW11 206 aa18.19■□□□□ 0.5
SEC23A-204ENST00000548032 IPO8O15397 1037 aaKnown RBP18.18■□□□□ 0.5
SEC23A-204ENST00000548032 AGBL3Q8NEM8 1001 aa18.18■□□□□ 0.5
SEC23A-204ENST00000548032 ARHGAP45Q92619 1136 aa18.18■□□□□ 0.5
SEC23A-204ENST00000548032 GLIS2Q9BZE0 524 aaPredicted RBP18.18■□□□□ 0.5
SEC23A-204ENST00000548032 SCN9AQ15858 1988 aa18.18■□□□□ 0.5
SEC23A-204ENST00000548032 ZBED9Q6R2W3 1325 aa18.18■□□□□ 0.5
SEC23A-204ENST00000548032 KIF4BQ2VIQ3 1234 aa18.17■□□□□ 0.5
SEC23A-204ENST00000548032 KLHDC4Q8TBB5 520 aa18.17■□□□□ 0.5
SEC23A-204ENST00000548032 ZC3H15Q8WU90 426 aaKnown RBP18.17■□□□□ 0.5
SEC23A-204ENST00000548032 USP17L8P0C7I0 530 aa18.16■□□□□ 0.5
SEC23A-204ENST00000548032 VEGFBP49765 207 aa18.16■□□□□ 0.5
SEC23A-204ENST00000548032 LRRC24Q50LG9 513 aa18.16■□□□□ 0.5
SEC23A-204ENST00000548032 DACT2Q5SW24 774 aa18.16■□□□□ 0.5
SEC23A-204ENST00000548032 STRIP1Q5VSL9 837 aa18.16■□□□□ 0.5
SEC23A-204ENST00000548032 ZNF804AQ7Z570 1209 aa18.16■□□□□ 0.5
SEC23A-204ENST00000548032 CD209Q9NNX6 404 aa18.16■□□□□ 0.5
SEC23A-204ENST00000548032 PGAP2Q9UHJ9 254 aa18.16■□□□□ 0.5
SEC23A-204ENST00000548032 ABT1Q9ULW3 272 aaKnown RBP18.16■□□□□ 0.5
SEC23A-204ENST00000548032 TNNQ9UQP3 1299 aa18.16■□□□□ 0.5
SEC23A-204ENST00000548032 TRIM27P14373 513 aa18.15■□□□□ 0.5
SEC23A-204ENST00000548032 ZNF280AP59817 542 aaPredicted RBP18.15■□□□□ 0.5
SEC23A-204ENST00000548032 GTF2IP78347 998 aa18.15■□□□□ 0.5
SEC23A-204ENST00000548032 METTL24Q5JXM2 366 aa18.15■□□□□ 0.5
SEC23A-204ENST00000548032 TTLL5Q6EMB2 1281 aa18.15■□□□□ 0.5
SEC23A-204ENST00000548032 C15orf52Q6ZUT6 534 aaKnown RBP18.15■□□□□ 0.5
SEC23A-204ENST00000548032 CLUAP1Q96AJ1 413 aa18.15■□□□□ 0.5
SEC23A-204ENST00000548032 GMLQ99445 158 aa18.15■□□□□ 0.5
SEC23A-204ENST00000548032 MEIS3Q99687 375 aa18.15■□□□□ 0.5
SEC23A-204ENST00000548032 ZNF408Q9H9D4 720 aa18.15■□□□□ 0.5
SEC23A-204ENST00000548032 RIPOR2Q9Y4F9 1068 aa18.15■□□□□ 0.5
SEC23A-204ENST00000548032 MROH5Q6ZUA9 1318 aa18.15■□□□□ 0.5
SEC23A-204ENST00000548032 IRS2Q9Y4H2 1338 aa18.15■□□□□ 0.5
SEC23A-204ENST00000548032 FOXN1O15353 648 aa18.14■□□□□ 0.49
SEC23A-204ENST00000548032 ATF7IPQ6VMQ6 1270 aa18.14■□□□□ 0.49
SEC23A-204ENST00000548032 CDC37L1Q7L3B6 337 aa18.14■□□□□ 0.49
SEC23A-204ENST00000548032 USP48Q86UV5 1035 aa18.14■□□□□ 0.49
SEC23A-204ENST00000548032 LRRFIP2Q9Y608 721 aaKnown RBP18.14■□□□□ 0.49
SEC23A-204ENST00000548032 CELF2O95319 508 aaKnown RBP18.13■□□□□ 0.49
SEC23A-204ENST00000548032 UBE4AQ14139 1066 aa18.13■□□□□ 0.49
SEC23A-204ENST00000548032 INTS3Q68E01 1043 aaKnown RBP18.13■□□□□ 0.49
SEC23A-204ENST00000548032 DCPSQ96C86 337 aaKnown RBP18.13■□□□□ 0.49
SEC23A-204ENST00000548032 MYOZ2Q9NPC6 264 aa18.13■□□□□ 0.49
SEC23A-204ENST00000548032 GGA3Q9NZ52 723 aa18.13■□□□□ 0.49
SEC23A-204ENST00000548032 HDAC5Q9UQL6 1122 aa18.13■□□□□ 0.49
SEC23A-204ENST00000548032 ASTN2O75129 1339 aaPredicted RBP18.13■□□□□ 0.49
SEC23A-204ENST00000548032 ZNF609O15014 1411 aa18.13■□□□□ 0.49
SEC23A-204ENST00000548032 GYG1P46976 350 aa18.12■□□□□ 0.49
SEC23A-204ENST00000548032 DEFB115Q30KQ5 88 aa18.12■□□□□ 0.49
SEC23A-204ENST00000548032 CST9Q5W186 159 aa18.12■□□□□ 0.49
SEC23A-204ENST00000548032 ZKSCAN2Q63HK3 967 aa18.12■□□□□ 0.49
SEC23A-204ENST00000548032 DLK2Q6UY11 383 aa18.12■□□□□ 0.49
SEC23A-204ENST00000548032 KRT26Q7Z3Y9 468 aa18.12■□□□□ 0.49
SEC23A-204ENST00000548032 OGFOD1Q8N543 542 aa18.12■□□□□ 0.49
SEC23A-204ENST00000548032 AIDAQ96BJ3 306 aa18.12■□□□□ 0.49
SEC23A-204ENST00000548032 JAG2Q9Y219 1238 aa18.12■□□□□ 0.49
SEC23A-204ENST00000548032 MYO3BQ8WXR4 1341 aa18.12■□□□□ 0.49
SEC23A-204ENST00000548032 RASSF10A6NK89 507 aa18.11■□□□□ 0.49
SEC23A-204ENST00000548032 ADM5C9JUS6 153 aa18.11■□□□□ 0.49
SEC23A-204ENST00000548032 RFX5P48382 616 aaPredicted RBP18.11■□□□□ 0.49
SEC23A-204ENST00000548032 SCARF1Q14162 830 aa18.11■□□□□ 0.49
SEC23A-204ENST00000548032 PAXIP1Q6ZW49 1069 aaPredicted RBP18.11■□□□□ 0.49
SEC23A-204ENST00000548032 KIAA0825Q8IV33 1275 aa18.11■□□□□ 0.49
SEC23A-204ENST00000548032 EYA2O00167 538 aa18.1■□□□□ 0.49
SEC23A-204ENST00000548032 GNAI3P08754 354 aa18.1■□□□□ 0.49
SEC23A-204ENST00000548032 IL1R1P14778 569 aa18.1■□□□□ 0.49
SEC23A-204ENST00000548032 HIBADHP31937 336 aaKnown RBP18.1■□□□□ 0.49
SEC23A-204ENST00000548032 PTPN12Q05209 780 aaKnown RBP18.1■□□□□ 0.49
SEC23A-204ENST00000548032 ANGEL2Q5VTE6 544 aaKnown RBP18.1■□□□□ 0.49
SEC23A-204ENST00000548032 SULF1Q8IWU6 871 aa18.1■□□□□ 0.49
SEC23A-204ENST00000548032 SIL1Q9H173 461 aa18.1■□□□□ 0.49
SEC23A-204ENST00000548032 A0A1B0GUL6 1792 aa18.09■□□□□ 0.49
SEC23A-204ENST00000548032 PDE8BO95263 885 aa18.09■□□□□ 0.49
SEC23A-204ENST00000548032 CTCFP49711 727 aaPredicted RBP18.09■□□□□ 0.49
SEC23A-204ENST00000548032 VPS37DQ86XT2 251 aa18.09■□□□□ 0.49
SEC23A-204ENST00000548032 FAM84BQ96KN1 310 aaPredicted RBP18.09■□□□□ 0.49
SEC23A-204ENST00000548032 PRDM10Q9NQV6 1147 aa18.09■□□□□ 0.49
SEC23A-204ENST00000548032 WBP1LQ9NX94 342 aa18.09■□□□□ 0.49
SEC23A-204ENST00000548032 HDAC9Q9UKV0 1011 aa18.09■□□□□ 0.49
SEC23A-204ENST00000548032 PSME4Q14997 1843 aa18.09■□□□□ 0.49
SEC23A-204ENST00000548032 F8W031 263 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms