RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 LRRC2Q9BYS8 371 aa14.05□□□□□ -0.16
RNF41-203ENST00000547967 PUS7LQ9H0K6 701 aaKnown RBP14.05□□□□□ -0.16
RNF41-203ENST00000547967 QTRT2Q9H974 415 aaKnown RBP14.05□□□□□ -0.16
RNF41-203ENST00000547967 TRPC5Q9UL62 973 aaPredicted RBP14.05□□□□□ -0.16
RNF41-203ENST00000547967 RTCBQ9Y3I0 505 aaKnown RBP14.05□□□□□ -0.16
RNF41-203ENST00000547967 TTLL5Q6EMB2 1281 aa14.04□□□□□ -0.16
RNF41-203ENST00000547967 SMC3Q9UQE7 1217 aa14.04□□□□□ -0.16
RNF41-203ENST00000547967 WTIPA6NIX2 430 aaPredicted RBP14.04□□□□□ -0.16
RNF41-203ENST00000547967 BRD1O95696 1058 aa14.04□□□□□ -0.16
RNF41-203ENST00000547967 HSP90B1P14625 803 aaKnown RBP14.04□□□□□ -0.16
RNF41-203ENST00000547967 STK3Q13188 491 aa14.04□□□□□ -0.16
RNF41-203ENST00000547967 TSGA10IPQ3SY00 556 aa14.04□□□□□ -0.16
RNF41-203ENST00000547967 SLC9C2Q5TAH2 1124 aa14.04□□□□□ -0.16
RNF41-203ENST00000547967 IL27Q8NEV9 243 aa14.04□□□□□ -0.16
RNF41-203ENST00000547967 SETDB2Q96T68 719 aa14.04□□□□□ -0.16
RNF41-203ENST00000547967 NARFQ9UHQ1 456 aa14.04□□□□□ -0.16
RNF41-203ENST00000547967 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.04□□□□□ -0.16
RNF41-203ENST00000547967 COL5A3P25940 1745 aaPredicted RBP14.04□□□□□ -0.16
RNF41-203ENST00000547967 BTAF1O14981 1849 aa14.03□□□□□ -0.16
RNF41-203ENST00000547967 SLC5A1P13866 664 aa14.03□□□□□ -0.16
RNF41-203ENST00000547967 FGFR2P21802 821 aa14.03□□□□□ -0.16
RNF41-203ENST00000547967 CHRNDQ07001 517 aa14.03□□□□□ -0.16
RNF41-203ENST00000547967 KRT32Q14532 448 aa14.03□□□□□ -0.16
RNF41-203ENST00000547967 LRRFIP1Q32MZ4 808 aaKnown RBP14.03□□□□□ -0.16
RNF41-203ENST00000547967 STOX1Q6ZVD7 989 aa14.03□□□□□ -0.16
RNF41-203ENST00000547967 ARHGEF1Q92888 912 aaKnown RBP14.03□□□□□ -0.16
RNF41-203ENST00000547967 PIH1D3Q9NQM4 214 aaKnown RBP14.03□□□□□ -0.16
RNF41-203ENST00000547967 RREB1Q92766 1687 aa14.03□□□□□ -0.16
RNF41-203ENST00000547967 PRPF40AO75400 957 aaKnown RBP14.03□□□□□ -0.16
RNF41-203ENST00000547967 BCAMP50895 628 aa14.03□□□□□ -0.16
RNF41-203ENST00000547967 TOB2Q14106 344 aaPredicted RBP14.03□□□□□ -0.16
RNF41-203ENST00000547967 RC3H1Q5TC82 1133 aaKnown RBP14.03□□□□□ -0.16
RNF41-203ENST00000547967 NBPF5PQ86XG9 351 aaPredicted RBP14.03□□□□□ -0.16
RNF41-203ENST00000547967 DSCC1Q9BVC3 393 aa14.03□□□□□ -0.16
RNF41-203ENST00000547967 ZFYP08048 801 aaPredicted RBP14.02□□□□□ -0.16
RNF41-203ENST00000547967 NCLP19338 710 aaKnown RBP14.02□□□□□ -0.16
RNF41-203ENST00000547967 HAND2P61296 217 aa14.02□□□□□ -0.16
RNF41-203ENST00000547967 ST3GAL1Q11201 340 aa14.02□□□□□ -0.16
RNF41-203ENST00000547967 ZSCAN31Q96LW9 406 aaPredicted RBP14.02□□□□□ -0.16
RNF41-203ENST00000547967 SH2B1Q9NRF2 756 aaPredicted RBP14.02□□□□□ -0.16
RNF41-203ENST00000547967 IQSEC3Q9UPP2 1182 aaPredicted RBP14.02□□□□□ -0.16
RNF41-203ENST00000547967 DDX49Q9Y6V7 483 aaKnown RBP14.02□□□□□ -0.16
RNF41-203ENST00000547967 NPHP1O15259 732 aa14.02□□□□□ -0.17
RNF41-203ENST00000547967 GJB2P29033 226 aa14.02□□□□□ -0.17
RNF41-203ENST00000547967 FGD1P98174 961 aa14.02□□□□□ -0.17
RNF41-203ENST00000547967 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.02□□□□□ -0.17
RNF41-203ENST00000547967 THSD7AQ9UPZ6 1657 aa14.01□□□□□ -0.17
RNF41-203ENST00000547967 RASGRF1Q13972 1273 aa14.01□□□□□ -0.17
RNF41-203ENST00000547967 FAM196AQ6ZSG2 479 aa14.01□□□□□ -0.17
RNF41-203ENST00000547967 Q6ZUG5 572 aa14.01□□□□□ -0.17
RNF41-203ENST00000547967 CHST3Q7LGC8 479 aa14.01□□□□□ -0.17
RNF41-203ENST00000547967 APPBP2Q92624 585 aa14.01□□□□□ -0.17
RNF41-203ENST00000547967 CDC5LQ99459 802 aaKnown RBP14.01□□□□□ -0.17
RNF41-203ENST00000547967 LRRC4BQ9NT99 713 aa14.01□□□□□ -0.17
RNF41-203ENST00000547967 ONECUT3O60422 494 aaPredicted RBP14.01□□□□□ -0.17
RNF41-203ENST00000547967 SYT1P21579 422 aa14.01□□□□□ -0.17
RNF41-203ENST00000547967 ARID4AP29374 1257 aaPredicted RBP14.01□□□□□ -0.17
RNF41-203ENST00000547967 RFC4P35249 363 aa14.01□□□□□ -0.17
RNF41-203ENST00000547967 ANKRD18AQ8IVF6 992 aa14.01□□□□□ -0.17
RNF41-203ENST00000547967 SPATA5Q8NB90 893 aa14.01□□□□□ -0.17
RNF41-203ENST00000547967 DDX60Q8IY21 1712 aaKnown RBP14.01□□□□□ -0.17
RNF41-203ENST00000547967 GPAA1O43292 621 aa14□□□□□ -0.17
RNF41-203ENST00000547967 UQCRFS1P1P0C7P4 283 aa14□□□□□ -0.17
RNF41-203ENST00000547967 ANKRD1Q15327 319 aa14□□□□□ -0.17
RNF41-203ENST00000547967 TTF1Q15361 905 aaPredicted RBP14□□□□□ -0.17
RNF41-203ENST00000547967 SKOR2Q2VWA4 1001 aaPredicted RBP14□□□□□ -0.17
RNF41-203ENST00000547967 CELF1Q92879 486 aaKnown RBP14□□□□□ -0.17
RNF41-203ENST00000547967 ZNF512BQ96KM6 892 aaPredicted RBP14□□□□□ -0.17
RNF41-203ENST00000547967 LMBRD1Q9NUN5 540 aa14□□□□□ -0.17
RNF41-203ENST00000547967 WWC3Q9ULE0 1092 aa14□□□□□ -0.17
RNF41-203ENST00000547967 ABCC12Q96J65 1359 aa14□□□□□ -0.17
RNF41-203ENST00000547967 E7EWF7 191 aa14□□□□□ -0.17
RNF41-203ENST00000547967 FOXP2O15409 715 aa14□□□□□ -0.17
RNF41-203ENST00000547967 FGAP02671 866 aa14□□□□□ -0.17
RNF41-203ENST00000547967 TICAM2Q86XR7 235 aa14□□□□□ -0.17
RNF41-203ENST00000547967 CICQ96RK0 1608 aaPredicted RBP14□□□□□ -0.17
RNF41-203ENST00000547967 TAF1P21675 1872 aa14□□□□□ -0.17
RNF41-203ENST00000547967 COL4A1P02462 1669 aa13.99□□□□□ -0.17
RNF41-203ENST00000547967 AKAP11Q9UKA4 1901 aa13.99□□□□□ -0.17
RNF41-203ENST00000547967 WDR33Q9C0J8 1336 aaKnown RBP13.99□□□□□ -0.17
RNF41-203ENST00000547967 ZNF532Q9HCE3 1301 aa13.99□□□□□ -0.17
RNF41-203ENST00000547967 STX6O43752 255 aa13.99□□□□□ -0.17
RNF41-203ENST00000547967 ADD2P35612 726 aa13.99□□□□□ -0.17
RNF41-203ENST00000547967 TRAPPC3LQ5T215 181 aa13.99□□□□□ -0.17
RNF41-203ENST00000547967 BRF1Q92994 677 aa13.99□□□□□ -0.17
RNF41-203ENST00000547967 GDPD2Q9HCC8 539 aa13.99□□□□□ -0.17
RNF41-203ENST00000547967 APPP05067 770 aa13.99□□□□□ -0.17
RNF41-203ENST00000547967 PTMSP20962 102 aa13.99□□□□□ -0.17
RNF41-203ENST00000547967 SF3B3Q15393 1217 aaKnown RBP13.99□□□□□ -0.17
RNF41-203ENST00000547967 TPTE2Q6XPS3 522 aa13.99□□□□□ -0.17
RNF41-203ENST00000547967 NLRP3Q96P20 1036 aa13.99□□□□□ -0.17
RNF41-203ENST00000547967 PDE6AP16499 860 aa13.98□□□□□ -0.17
RNF41-203ENST00000547967 TPRNQ4KMQ1 711 aa13.98□□□□□ -0.17
RNF41-203ENST00000547967 BCL11BQ9C0K0 894 aaPredicted RBP13.98□□□□□ -0.17
RNF41-203ENST00000547967 NYXQ9GZU5 481 aa13.98□□□□□ -0.17
RNF41-203ENST00000547967 SPEF2Q9C093 1822 aa13.98□□□□□ -0.17
RNF41-203ENST00000547967 ATRNO75882 1429 aa13.98□□□□□ -0.17
RNF41-203ENST00000547967 RTL9Q8NET4 1388 aa13.98□□□□□ -0.17
RNF41-203ENST00000547967 TRIM37O94972 964 aa13.98□□□□□ -0.17
RNF41-203ENST00000547967 GYG1P46976 350 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms