RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 KLRK1P26718 216 aa13.09□□□□□ -0.31
BEST3-208ENST00000547208 IGHMBP2P38935 993 aaKnown RBP13.09□□□□□ -0.31
BEST3-208ENST00000547208 SSH1Q8WYL5 1049 aa13.09□□□□□ -0.31
BEST3-208ENST00000547208 KAZALD1Q96I82 304 aa13.09□□□□□ -0.31
BEST3-208ENST00000547208 GMLQ99445 158 aa13.09□□□□□ -0.31
BEST3-208ENST00000547208 GLIS2Q9BZE0 524 aaPredicted RBP13.09□□□□□ -0.31
BEST3-208ENST00000547208 UTYO14607 1347 aa13.09□□□□□ -0.31
BEST3-208ENST00000547208 CASP8AP2Q9UKL3 1982 aa13.09□□□□□ -0.31
BEST3-208ENST00000547208 ARAP2Q8WZ64 1704 aa13.08□□□□□ -0.32
BEST3-208ENST00000547208 CTCFP49711 727 aaPredicted RBP13.08□□□□□ -0.32
BEST3-208ENST00000547208 TBC1D10BQ4KMP7 808 aaPredicted RBP13.08□□□□□ -0.32
BEST3-208ENST00000547208 RSBN1LQ6PCB5 846 aaPredicted RBP13.08□□□□□ -0.32
BEST3-208ENST00000547208 PODNQ7Z5L7 613 aa13.08□□□□□ -0.32
BEST3-208ENST00000547208 SRCIN1Q9C0H9 1055 aa13.08□□□□□ -0.32
BEST3-208ENST00000547208 LEMD3Q9Y2U8 911 aa13.08□□□□□ -0.32
BEST3-208ENST00000547208 ANKRD18BA2A2Z9 1011 aa13.07□□□□□ -0.32
BEST3-208ENST00000547208 G3V3G9 751 aa13.07□□□□□ -0.32
BEST3-208ENST00000547208 ZNF280AP59817 542 aaPredicted RBP13.07□□□□□ -0.32
BEST3-208ENST00000547208 CHRNDQ07001 517 aa13.07□□□□□ -0.32
BEST3-208ENST00000547208 DEFB115Q30KQ5 88 aa13.07□□□□□ -0.32
BEST3-208ENST00000547208 DCAF8Q5TAQ9 597 aa13.07□□□□□ -0.32
BEST3-208ENST00000547208 SLC4A10Q6U841 1118 aa13.07□□□□□ -0.32
BEST3-208ENST00000547208 LMBR1LQ6UX01 489 aa13.07□□□□□ -0.32
BEST3-208ENST00000547208 DLK2Q6UY11 383 aa13.07□□□□□ -0.32
BEST3-208ENST00000547208 AGBL3Q8NEM8 1001 aa13.07□□□□□ -0.32
BEST3-208ENST00000547208 MPHOSPH8Q99549 860 aa13.07□□□□□ -0.32
BEST3-208ENST00000547208 ANKRD2Q9GZV1 360 aa13.07□□□□□ -0.32
BEST3-208ENST00000547208 ABT1Q9ULW3 272 aaKnown RBP13.07□□□□□ -0.32
BEST3-208ENST00000547208 TLL2Q9Y6L7 1015 aa13.07□□□□□ -0.32
BEST3-208ENST00000547208 ZNF804BA4D1E1 1349 aa13.07□□□□□ -0.32
BEST3-208ENST00000547208 PTPRCP08575 1304 aa13.07□□□□□ -0.32
BEST3-208ENST00000547208 USP17L3A6NCW0 530 aa13.06□□□□□ -0.32
BEST3-208ENST00000547208 USP17L4A6NCW7 530 aa13.06□□□□□ -0.32
BEST3-208ENST00000547208 NBPF7P0C2Y1 421 aaPredicted RBP13.06□□□□□ -0.32
BEST3-208ENST00000547208 GRM1Q13255 1194 aa13.06□□□□□ -0.32
BEST3-208ENST00000547208 IFIT5Q13325 482 aaKnown RBP13.06□□□□□ -0.32
BEST3-208ENST00000547208 KIF4BQ2VIQ3 1234 aa13.06□□□□□ -0.32
BEST3-208ENST00000547208 DACT2Q5SW24 774 aa13.06□□□□□ -0.32
BEST3-208ENST00000547208 CDC37L1Q7L3B6 337 aa13.06□□□□□ -0.32
BEST3-208ENST00000547208 USP17L1Q7RTZ2 530 aa13.06□□□□□ -0.32
BEST3-208ENST00000547208 SUCLG2Q96I99 432 aa13.06□□□□□ -0.32
BEST3-208ENST00000547208 COA1Q9GZY4 146 aa13.06□□□□□ -0.32
BEST3-208ENST00000547208 C9orf78Q9NZ63 289 aaPredicted RBP13.06□□□□□ -0.32
BEST3-208ENST00000547208 ASTN2O75129 1339 aaPredicted RBP13.06□□□□□ -0.32
BEST3-208ENST00000547208 WDR33Q9C0J8 1336 aaKnown RBP13.06□□□□□ -0.32
BEST3-208ENST00000547208 SNAP23O00161 211 aa13.05□□□□□ -0.32
BEST3-208ENST00000547208 CELF2O95319 508 aaKnown RBP13.05□□□□□ -0.32
BEST3-208ENST00000547208 RBM26Q5T8P6 1007 aaKnown RBP13.05□□□□□ -0.32
BEST3-208ENST00000547208 CYP4F22Q6NT55 531 aa13.05□□□□□ -0.32
BEST3-208ENST00000547208 SAPCD2Q86UD0 394 aa13.05□□□□□ -0.32
BEST3-208ENST00000547208 ZNF594Q96JF6 807 aaPredicted RBP13.05□□□□□ -0.32
BEST3-208ENST00000547208 MXD3Q9BW11 206 aa13.05□□□□□ -0.32
BEST3-208ENST00000547208 MYH13Q9UKX3 1938 aa13.04□□□□□ -0.32
BEST3-208ENST00000547208 CCDC85CA6NKD9 419 aa13.04□□□□□ -0.32
BEST3-208ENST00000547208 ABCB7O75027 752 aa13.04□□□□□ -0.32
BEST3-208ENST00000547208 AOC2O75106 756 aa13.04□□□□□ -0.32
BEST3-208ENST00000547208 TAF5LO75529 589 aa13.04□□□□□ -0.32
BEST3-208ENST00000547208 ALDH1L2Q3SY69 923 aa13.04□□□□□ -0.32
BEST3-208ENST00000547208 RABL6Q3YEC7 729 aaPredicted RBP13.04□□□□□ -0.32
BEST3-208ENST00000547208 C15orf52Q6ZUT6 534 aaKnown RBP13.04□□□□□ -0.32
BEST3-208ENST00000547208 USP48Q86UV5 1035 aa13.04□□□□□ -0.32
BEST3-208ENST00000547208 HELBQ8NG08 1087 aaPredicted RBP13.04□□□□□ -0.32
BEST3-208ENST00000547208 CHMP3Q9Y3E7 222 aa13.04□□□□□ -0.32
BEST3-208ENST00000547208 ADM5C9JUS6 153 aa13.03□□□□□ -0.32
BEST3-208ENST00000547208 USP17L8P0C7I0 530 aa13.03□□□□□ -0.32
BEST3-208ENST00000547208 CCDC57Q2TAC2 916 aa13.03□□□□□ -0.32
BEST3-208ENST00000547208 STRIP1Q5VSL9 837 aa13.03□□□□□ -0.32
BEST3-208ENST00000547208 KRT26Q7Z3Y9 468 aa13.03□□□□□ -0.32
BEST3-208ENST00000547208 ANKRD44Q8N8A2 993 aa13.03□□□□□ -0.32
BEST3-208ENST00000547208 AIDAQ96BJ3 306 aa13.03□□□□□ -0.32
BEST3-208ENST00000547208 MYOZ2Q9NPC6 264 aa13.03□□□□□ -0.32
BEST3-208ENST00000547208 GGA3Q9NZ52 723 aa13.03□□□□□ -0.32
BEST3-208ENST00000547208 LDHAL6AQ6ZMR3 332 aa13.02□□□□□ -0.33
BEST3-208ENST00000547208 HHIPL1Q96JK4 782 aa13.02□□□□□ -0.33
BEST3-208ENST00000547208 CAPNS2Q96L46 248 aa13.02□□□□□ -0.33
BEST3-208ENST00000547208 ZIC5Q96T25 663 aa13.02□□□□□ -0.33
BEST3-208ENST00000547208 USP44Q9H0E7 712 aa13.02□□□□□ -0.33
BEST3-208ENST00000547208 BICC1Q9H694 974 aaKnown RBP13.02□□□□□ -0.33
BEST3-208ENST00000547208 ZNF408Q9H9D4 720 aa13.02□□□□□ -0.33
BEST3-208ENST00000547208 CD209Q9NNX6 404 aa13.02□□□□□ -0.33
BEST3-208ENST00000547208 PAPPA2Q9BXP8 1791 aa13.02□□□□□ -0.33
BEST3-208ENST00000547208 CT47B1P0C2W7 299 aaPredicted RBP13.01□□□□□ -0.33
BEST3-208ENST00000547208 DSG3P32926 999 aa13.01□□□□□ -0.33
BEST3-208ENST00000547208 KCNJ4P48050 445 aa13.01□□□□□ -0.33
BEST3-208ENST00000547208 BRPF1P55201 1214 aaPredicted RBP13.01□□□□□ -0.33
BEST3-208ENST00000547208 SCARF1Q14162 830 aa13.01□□□□□ -0.33
BEST3-208ENST00000547208 ANGEL2Q5VTE6 544 aaKnown RBP13.01□□□□□ -0.33
BEST3-208ENST00000547208 DCPSQ96C86 337 aaKnown RBP13.01□□□□□ -0.33
BEST3-208ENST00000547208 PUS3Q9BZE2 481 aaKnown RBP13.01□□□□□ -0.33
BEST3-208ENST00000547208 SMC4Q9NTJ3 1288 aa13.01□□□□□ -0.33
BEST3-208ENST00000547208 MYO3BQ8WXR4 1341 aa13.01□□□□□ -0.33
BEST3-208ENST00000547208 AKAP11Q9UKA4 1901 aa13□□□□□ -0.33
BEST3-208ENST00000547208 PITPNM2Q9BZ72 1349 aa13□□□□□ -0.33
BEST3-208ENST00000547208 IL1R1P14778 569 aa13□□□□□ -0.33
BEST3-208ENST00000547208 ECE1P42892 770 aa13□□□□□ -0.33
BEST3-208ENST00000547208 GTF2IP78347 998 aa13□□□□□ -0.33
BEST3-208ENST00000547208 POLA2Q14181 598 aa13□□□□□ -0.33
BEST3-208ENST00000547208 TTLL5Q6EMB2 1281 aa13□□□□□ -0.33
BEST3-208ENST00000547208 CERS5Q8N5B7 392 aa13□□□□□ -0.33
BEST3-208ENST00000547208 RIPOR2Q9Y4F9 1068 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms