RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 NOP2P46087 812 aaKnown RBP12.46□□□□□ -0.42
NPAS3-205ENST00000547068 KCNJ6P48051 423 aa12.46□□□□□ -0.42
NPAS3-205ENST00000547068 RESTQ13127 1097 aa12.46□□□□□ -0.42
NPAS3-205ENST00000547068 IFFO2Q5TF58 517 aa12.46□□□□□ -0.42
NPAS3-205ENST00000547068 TMC6Q7Z403 805 aa12.46□□□□□ -0.42
NPAS3-205ENST00000547068 FBXW7Q969H0 707 aa12.46□□□□□ -0.42
NPAS3-205ENST00000547068 DDX11Q96FC9 970 aa12.46□□□□□ -0.42
NPAS3-205ENST00000547068 AK7Q96M32 723 aa12.46□□□□□ -0.42
NPAS3-205ENST00000547068 EFCAB8A8MWE9 144 aa12.45□□□□□ -0.42
NPAS3-205ENST00000547068 DHX16O60231 1041 aaKnown RBP12.45□□□□□ -0.42
NPAS3-205ENST00000547068 KINO60870 393 aaKnown RBP12.45□□□□□ -0.42
NPAS3-205ENST00000547068 SMC2O95347 1197 aa12.45□□□□□ -0.42
NPAS3-205ENST00000547068 TBC1D8O95759 1140 aa12.45□□□□□ -0.42
NPAS3-205ENST00000547068 CCDC158Q5M9N0 1113 aa12.45□□□□□ -0.42
NPAS3-205ENST00000547068 CCDC73Q6ZRK6 1079 aa12.45□□□□□ -0.42
NPAS3-205ENST00000547068 SLC27A2O14975 620 aa12.45□□□□□ -0.42
NPAS3-205ENST00000547068 TADA3O75528 432 aa12.45□□□□□ -0.42
NPAS3-205ENST00000547068 SASH3O75995 380 aa12.45□□□□□ -0.42
NPAS3-205ENST00000547068 URI1O94763 535 aaPredicted RBP12.45□□□□□ -0.42
NPAS3-205ENST00000547068 GOLGA5Q8TBA6 731 aa12.45□□□□□ -0.42
NPAS3-205ENST00000547068 BRF1Q92994 677 aa12.45□□□□□ -0.42
NPAS3-205ENST00000547068 CCDC34Q96HJ3 373 aa12.45□□□□□ -0.42
NPAS3-205ENST00000547068 TMX1Q9H3N1 280 aa12.45□□□□□ -0.42
NPAS3-205ENST00000547068 ZSCAN16Q9H4T2 348 aaPredicted RBP12.45□□□□□ -0.42
NPAS3-205ENST00000547068 USP42Q9H9J4 1324 aaKnown RBP12.44□□□□□ -0.42
NPAS3-205ENST00000547068 CCP110O43303 1012 aa12.44□□□□□ -0.42
NPAS3-205ENST00000547068 RPS6KB1P23443 525 aa12.44□□□□□ -0.42
NPAS3-205ENST00000547068 OS9Q13438 667 aaPredicted RBP12.44□□□□□ -0.42
NPAS3-205ENST00000547068 TOB2Q14106 344 aaPredicted RBP12.44□□□□□ -0.42
NPAS3-205ENST00000547068 HSP90AB4PQ58FF6 505 aa12.44□□□□□ -0.42
NPAS3-205ENST00000547068 CTR9Q6PD62 1173 aa12.44□□□□□ -0.42
NPAS3-205ENST00000547068 MAP4K1Q92918 833 aa12.44□□□□□ -0.42
NPAS3-205ENST00000547068 CARD6Q9BX69 1037 aa12.44□□□□□ -0.42
NPAS3-205ENST00000547068 GOLPH3LQ9H4A5 285 aa12.44□□□□□ -0.42
NPAS3-205ENST00000547068 YY1AP1Q9H869 796 aa12.44□□□□□ -0.42
NPAS3-205ENST00000547068 ABCC6O95255 1503 aa12.44□□□□□ -0.42
NPAS3-205ENST00000547068 RGPD5Q99666 1765 aa12.44□□□□□ -0.42
NPAS3-205ENST00000547068 JAK2O60674 1132 aa12.44□□□□□ -0.42
NPAS3-205ENST00000547068 CC2D1AQ6P1N0 951 aaPredicted RBP12.44□□□□□ -0.42
NPAS3-205ENST00000547068 SRLQ86TD4 932 aa12.44□□□□□ -0.42
NPAS3-205ENST00000547068 RGS22Q8NE09 1264 aa12.44□□□□□ -0.42
NPAS3-205ENST00000547068 FBXO18Q8NFZ0 1043 aa12.44□□□□□ -0.42
NPAS3-205ENST00000547068 EYA1Q99502 592 aa12.44□□□□□ -0.42
NPAS3-205ENST00000547068 XPO4Q9C0E2 1151 aaKnown RBP12.44□□□□□ -0.42
NPAS3-205ENST00000547068 BTG4Q9NY30 223 aa12.44□□□□□ -0.42
NPAS3-205ENST00000547068 EVCP57679 992 aa12.43□□□□□ -0.42
NPAS3-205ENST00000547068 DHX8Q14562 1220 aaKnown RBP12.43□□□□□ -0.42
NPAS3-205ENST00000547068 LRRFIP1Q32MZ4 808 aaKnown RBP12.43□□□□□ -0.42
NPAS3-205ENST00000547068 ERCC4Q92889 916 aaPredicted RBP12.43□□□□□ -0.42
NPAS3-205ENST00000547068 IFNKQ9P0W0 207 aa12.43□□□□□ -0.42
NPAS3-205ENST00000547068 IFIT2P09913 472 aaKnown RBP12.43□□□□□ -0.42
NPAS3-205ENST00000547068 LMAN1P49257 510 aa12.43□□□□□ -0.42
NPAS3-205ENST00000547068 GTF2A1P52655 376 aaPredicted RBP12.43□□□□□ -0.42
NPAS3-205ENST00000547068 GYS2P54840 703 aa12.43□□□□□ -0.42
NPAS3-205ENST00000547068 MTHFSDQ2M296 383 aaKnown RBP12.43□□□□□ -0.42
NPAS3-205ENST00000547068 MEX3CQ5U5Q3 659 aaKnown RBP12.43□□□□□ -0.42
NPAS3-205ENST00000547068 REXO1L1PQ8IX06 675 aa12.43□□□□□ -0.42
NPAS3-205ENST00000547068 CLASRPQ8N2M8 674 aaKnown RBP12.43□□□□□ -0.42
NPAS3-205ENST00000547068 EVI5LQ96CN4 794 aa12.43□□□□□ -0.42
NPAS3-205ENST00000547068 ALDH8A1Q9H2A2 487 aaPredicted RBP12.43□□□□□ -0.42
NPAS3-205ENST00000547068 ECHDC1Q9NTX5 307 aa12.43□□□□□ -0.42
NPAS3-205ENST00000547068 RRP15Q9Y3B9 282 aaKnown RBP12.43□□□□□ -0.42
NPAS3-205ENST00000547068 COL18A1P39060 1754 aa12.43□□□□□ -0.42
NPAS3-205ENST00000547068 EXOC4Q96A65 974 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 NGLY1Q96IV0 654 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 FAM227BQ96M60 508 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 EPC1Q9H2F5 836 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 ARFGAP3Q9NP61 516 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 STRN4Q9NRL3 753 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 ATG3Q9NT62 314 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 NLRP2Q9NX02 1062 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 ADAM21Q9UKJ8 722 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 PXDNLA1KZ92 1463 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 FAM160A1Q05DH4 1040 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 ZRSR1Q15695 479 aaKnown RBP12.42□□□□□ -0.42
NPAS3-205ENST00000547068 TRIM65Q6PJ69 517 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 TOM1L2Q6ZVM7 507 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 GOLGA6L1Q8N7Z2 621 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 GPATCH3Q96I76 525 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 PSD3Q9NYI0 1048 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 RCOR1Q9UKL0 485 aa12.42□□□□□ -0.42
NPAS3-205ENST00000547068 COL14A1Q05707 1796 aaKnown RBP12.42□□□□□ -0.42
NPAS3-205ENST00000547068 IGSF1Q8N6C5 1336 aa12.41□□□□□ -0.42
NPAS3-205ENST00000547068 NMIQ13287 307 aaPredicted RBP12.41□□□□□ -0.42
NPAS3-205ENST00000547068 GNL2Q13823 731 aaKnown RBP12.41□□□□□ -0.42
NPAS3-205ENST00000547068 NBPF6Q5VWK0 638 aa12.41□□□□□ -0.42
NPAS3-205ENST00000547068 GPR161Q8N6U8 529 aaKnown RBP12.41□□□□□ -0.42
NPAS3-205ENST00000547068 NBPF4Q96M43 638 aa12.41□□□□□ -0.42
NPAS3-205ENST00000547068 FTOQ9C0B1 505 aaKnown RBP eCLIP12.41□□□□□ -0.42
NPAS3-205ENST00000547068 FAM208AQ9UK61 1670 aaKnown RBP12.41□□□□□ -0.42
NPAS3-205ENST00000547068 CAMTA1Q9Y6Y1 1673 aa12.41□□□□□ -0.42
NPAS3-205ENST00000547068 ICE2Q659A1 982 aa12.41□□□□□ -0.42
NPAS3-205ENST00000547068 ENGASEQ8NFI3 743 aa12.41□□□□□ -0.42
NPAS3-205ENST00000547068 C8orf37Q96NL8 207 aa12.41□□□□□ -0.42
NPAS3-205ENST00000547068 GEMIN8Q9NWZ8 242 aaKnown RBP12.41□□□□□ -0.42
NPAS3-205ENST00000547068 PARP3Q9Y6F1 533 aa12.41□□□□□ -0.42
NPAS3-205ENST00000547068 WDR17Q8IZU2 1322 aa12.4□□□□□ -0.42
NPAS3-205ENST00000547068 HIP1O00291 1037 aa12.4□□□□□ -0.42
NPAS3-205ENST00000547068 NBPF7P0C2Y1 421 aaPredicted RBP12.4□□□□□ -0.42
NPAS3-205ENST00000547068 ACTN2P35609 894 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms