RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 FAM89AQ96GI7 184 aa12.84□□□□□ -0.35
R3HDM2-210ENST00000547019 PODXL2Q9NZ53 605 aa12.84□□□□□ -0.35
R3HDM2-210ENST00000547019 GJA5P36382 358 aa12.83□□□□□ -0.36
R3HDM2-210ENST00000547019 CRHR2Q13324 411 aa12.83□□□□□ -0.36
R3HDM2-210ENST00000547019 RTL5Q5HYW3 569 aaPredicted RBP12.83□□□□□ -0.36
R3HDM2-210ENST00000547019 PNISRQ8TF01 805 aaKnown RBP12.83□□□□□ -0.36
R3HDM2-210ENST00000547019 NECTIN2Q92692 538 aa12.83□□□□□ -0.36
R3HDM2-210ENST00000547019 RUNDC1Q96C34 613 aa12.83□□□□□ -0.36
R3HDM2-210ENST00000547019 CLMNQ96JQ2 1002 aa12.83□□□□□ -0.36
R3HDM2-210ENST00000547019 PRO3102Q9H379 93 aa12.83□□□□□ -0.36
R3HDM2-210ENST00000547019 SEC31BQ9NQW1 1179 aa12.83□□□□□ -0.36
R3HDM2-210ENST00000547019 ADAMTS8Q9UP79 889 aa12.83□□□□□ -0.36
R3HDM2-210ENST00000547019 SASH1O94885 1247 aa12.82□□□□□ -0.36
R3HDM2-210ENST00000547019 DIEXFQ68CQ4 756 aaKnown RBP12.82□□□□□ -0.36
R3HDM2-210ENST00000547019 ZC3H12CQ9C0D7 883 aaKnown RBP12.82□□□□□ -0.36
R3HDM2-210ENST00000547019 SOX1O00570 391 aaPredicted RBP12.81□□□□□ -0.36
R3HDM2-210ENST00000547019 ALDH1A1P00352 501 aa12.81□□□□□ -0.36
R3HDM2-210ENST00000547019 MYCP01106 439 aaPredicted RBP12.81□□□□□ -0.36
R3HDM2-210ENST00000547019 RPS8P62241 208 aaKnown RBP12.81□□□□□ -0.36
R3HDM2-210ENST00000547019 HSP90AB3PQ58FF7 597 aa12.81□□□□□ -0.36
R3HDM2-210ENST00000547019 SHISA4Q96DD7 197 aa12.81□□□□□ -0.36
R3HDM2-210ENST00000547019 ERO1AQ96HE7 468 aa12.81□□□□□ -0.36
R3HDM2-210ENST00000547019 EFCC1Q9HA90 598 aa12.81□□□□□ -0.36
R3HDM2-210ENST00000547019 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.81□□□□□ -0.36
R3HDM2-210ENST00000547019 ANGEL1Q9UNK9 670 aaKnown RBP12.81□□□□□ -0.36
R3HDM2-210ENST00000547019 PTCH2Q9Y6C5 1203 aa12.81□□□□□ -0.36
R3HDM2-210ENST00000547019 ALPK3Q96L96 1907 aa12.81□□□□□ -0.36
R3HDM2-210ENST00000547019 MANSC4A6NHS7 340 aaPredicted RBP12.8□□□□□ -0.36
R3HDM2-210ENST00000547019 TMPOP42166 694 aaKnown RBP12.8□□□□□ -0.36
R3HDM2-210ENST00000547019 LMOD3Q0VAK6 560 aa12.8□□□□□ -0.36
R3HDM2-210ENST00000547019 WNK4Q96J92 1243 aa12.8□□□□□ -0.36
R3HDM2-210ENST00000547019 PTPN18Q99952 460 aa12.8□□□□□ -0.36
R3HDM2-210ENST00000547019 ISCA1Q9BUE6 129 aa12.8□□□□□ -0.36
R3HDM2-210ENST00000547019 MYH3P11055 1940 aa12.8□□□□□ -0.36
R3HDM2-210ENST00000547019 USP17L3A6NCW0 530 aa12.79□□□□□ -0.36
R3HDM2-210ENST00000547019 USP17L4A6NCW7 530 aa12.79□□□□□ -0.36
R3HDM2-210ENST00000547019 ATP5J2-PTCD1G3V325 749 aa12.79□□□□□ -0.36
R3HDM2-210ENST00000547019 NF2P35240 595 aa12.79□□□□□ -0.36
R3HDM2-210ENST00000547019 KRT24Q2M2I5 525 aa12.79□□□□□ -0.36
R3HDM2-210ENST00000547019 DACT2Q5SW24 774 aa12.79□□□□□ -0.36
R3HDM2-210ENST00000547019 USP17L1Q7RTZ2 530 aa12.79□□□□□ -0.36
R3HDM2-210ENST00000547019 ARMC9Q7Z3E5 817 aa12.79□□□□□ -0.36
R3HDM2-210ENST00000547019 ANKIB1Q9P2G1 1089 aa12.79□□□□□ -0.36
R3HDM2-210ENST00000547019 GGA1Q9UJY5 639 aa12.79□□□□□ -0.36
R3HDM2-210ENST00000547019 RIPK4P57078 832 aa12.78□□□□□ -0.36
R3HDM2-210ENST00000547019 NEUROD2Q15784 382 aa12.78□□□□□ -0.36
R3HDM2-210ENST00000547019 TMEM106CQ9BVX2 250 aa12.78□□□□□ -0.36
R3HDM2-210ENST00000547019 TSPYL4Q9UJ04 414 aa12.78□□□□□ -0.36
R3HDM2-210ENST00000547019 A0A1B0GUL6 1792 aa12.77□□□□□ -0.36
R3HDM2-210ENST00000547019 G3V3G9 751 aa12.77□□□□□ -0.37
R3HDM2-210ENST00000547019 ZBTB48P10074 688 aaPredicted RBP12.77□□□□□ -0.37
R3HDM2-210ENST00000547019 SP3Q02447 781 aa12.77□□□□□ -0.37
R3HDM2-210ENST00000547019 MAP3K11Q16584 847 aa12.77□□□□□ -0.37
R3HDM2-210ENST00000547019 SLC9C1Q4G0N8 1177 aa12.77□□□□□ -0.37
R3HDM2-210ENST00000547019 DCAF8Q5TAQ9 597 aa12.77□□□□□ -0.37
R3HDM2-210ENST00000547019 SH3TC2Q8TF17 1288 aa12.77□□□□□ -0.37
R3HDM2-210ENST00000547019 LRCH3Q96II8 777 aa12.77□□□□□ -0.37
R3HDM2-210ENST00000547019 ZBED3Q96IU2 234 aaPredicted RBP12.77□□□□□ -0.37
R3HDM2-210ENST00000547019 COL1A1P02452 1464 aaPredicted RBP12.77□□□□□ -0.37
R3HDM2-210ENST00000547019 IRS4O14654 1257 aaPredicted RBP12.76□□□□□ -0.37
R3HDM2-210ENST00000547019 APAF1O14727 1248 aa12.76□□□□□ -0.37
R3HDM2-210ENST00000547019 SLC4A8Q2Y0W8 1093 aa12.76□□□□□ -0.37
R3HDM2-210ENST00000547019 FAM9BQ8IZU0 186 aa12.76□□□□□ -0.37
R3HDM2-210ENST00000547019 CHPF2Q9P2E5 772 aa12.76□□□□□ -0.37
R3HDM2-210ENST00000547019 PCDHAC2Q9Y5I4 1007 aa12.76□□□□□ -0.37
R3HDM2-210ENST00000547019 AOX1Q06278 1338 aa12.76□□□□□ -0.37
R3HDM2-210ENST00000547019 VCANP13611 3396 aa12.75□□□□□ -0.37
R3HDM2-210ENST00000547019 CCER2I3L3R5 266 aa12.75□□□□□ -0.37
R3HDM2-210ENST00000547019 INHBEP58166 350 aa12.75□□□□□ -0.37
R3HDM2-210ENST00000547019 PODNQ7Z5L7 613 aa12.75□□□□□ -0.37
R3HDM2-210ENST00000547019 TXNRD3Q86VQ6 643 aa12.75□□□□□ -0.37
R3HDM2-210ENST00000547019 SLC10A4Q96EP9 437 aa12.75□□□□□ -0.37
R3HDM2-210ENST00000547019 CCDC85AQ96PX6 553 aaPredicted RBP12.75□□□□□ -0.37
R3HDM2-210ENST00000547019 ARHGAP39Q9C0H5 1083 aa12.75□□□□□ -0.37
R3HDM2-210ENST00000547019 EYSQ5T1H1 3165 aa12.75□□□□□ -0.37
R3HDM2-210ENST00000547019 ARAP2Q8WZ64 1704 aa12.74□□□□□ -0.37
R3HDM2-210ENST00000547019 MED23Q9ULK4 1368 aa12.74□□□□□ -0.37
R3HDM2-210ENST00000547019 XDHP47989 1333 aa12.74□□□□□ -0.37
R3HDM2-210ENST00000547019 MNX1P50219 401 aaPredicted RBP12.74□□□□□ -0.37
R3HDM2-210ENST00000547019 UBE2Q1Q7Z7E8 422 aa12.74□□□□□ -0.37
R3HDM2-210ENST00000547019 APOBEC3FQ8IUX4 373 aaKnown RBP12.74□□□□□ -0.37
R3HDM2-210ENST00000547019 PLBD2Q8NHP8 589 aa12.74□□□□□ -0.37
R3HDM2-210ENST00000547019 TESPA1A2RU30 521 aaPredicted RBP12.73□□□□□ -0.37
R3HDM2-210ENST00000547019 KLRK1P26718 216 aa12.73□□□□□ -0.37
R3HDM2-210ENST00000547019 MTFR1Q15390 333 aa12.73□□□□□ -0.37
R3HDM2-210ENST00000547019 CNKSR2Q8WXI2 1034 aa12.73□□□□□ -0.37
R3HDM2-210ENST00000547019 FBXW7Q969H0 707 aa12.73□□□□□ -0.37
R3HDM2-210ENST00000547019 DEFB129Q9H1M3 183 aa12.73□□□□□ -0.37
R3HDM2-210ENST00000547019 SPTBN5Q9NRC6 3674 aaKnown RBP12.73□□□□□ -0.37
R3HDM2-210ENST00000547019 KIAA0825Q8IV33 1275 aa12.72□□□□□ -0.37
R3HDM2-210ENST00000547019 JARID2Q92833 1246 aaPredicted RBP12.72□□□□□ -0.37
R3HDM2-210ENST00000547019 MS4A4AQ96JQ5 239 aa12.72□□□□□ -0.37
R3HDM2-210ENST00000547019 TRIM35Q9UPQ4 493 aa12.72□□□□□ -0.37
R3HDM2-210ENST00000547019 STRIP1Q5VSL9 837 aa12.71□□□□□ -0.37
R3HDM2-210ENST00000547019 ANKRD13DQ6ZTN6 518 aa12.71□□□□□ -0.37
R3HDM2-210ENST00000547019 MIER1Q8N108 512 aa12.71□□□□□ -0.37
R3HDM2-210ENST00000547019 OGFOD1Q8N543 542 aa12.71□□□□□ -0.37
R3HDM2-210ENST00000547019 BRI3BPQ8WY22 251 aa12.71□□□□□ -0.37
R3HDM2-210ENST00000547019 DPF3Q92784 378 aa12.71□□□□□ -0.37
R3HDM2-210ENST00000547019 MGAMO43451 1857 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms