RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 CREBZFQ9NS37 354 aa18.56■□□□□ 0.56
CCDC38-205ENST00000546947 TAF5LO75529 589 aa18.55■□□□□ 0.56
CCDC38-205ENST00000546947 C15orf52Q6ZUT6 534 aaKnown RBP18.55■□□□□ 0.56
CCDC38-205ENST00000546947 TXNRD3Q86VQ6 643 aa18.55■□□□□ 0.56
CCDC38-205ENST00000546947 ZC3H15Q8WU90 426 aaKnown RBP18.55■□□□□ 0.56
CCDC38-205ENST00000546947 KLRG1Q96E93 195 aa18.55■□□□□ 0.56
CCDC38-205ENST00000546947 PGAP2Q9UHJ9 254 aa18.55■□□□□ 0.56
CCDC38-205ENST00000546947 HDAC5Q9UQL6 1122 aa18.55■□□□□ 0.56
CCDC38-205ENST00000546947 SHTN1A0MZ66 631 aa18.54■□□□□ 0.56
CCDC38-205ENST00000546947 BCAR3O75815 825 aa18.54■□□□□ 0.56
CCDC38-205ENST00000546947 HELBQ8NG08 1087 aaPredicted RBP18.54■□□□□ 0.56
CCDC38-205ENST00000546947 TRPM4Q8TD43 1214 aa18.54■□□□□ 0.56
CCDC38-205ENST00000546947 IRS2Q9Y4H2 1338 aa18.53■□□□□ 0.56
CCDC38-205ENST00000546947 TMEM88BA6NKF7 163 aa18.53■□□□□ 0.56
CCDC38-205ENST00000546947 UBTFL1P0CB47 393 aaPredicted RBP18.53■□□□□ 0.56
CCDC38-205ENST00000546947 KLRK1P26718 216 aa18.53■□□□□ 0.56
CCDC38-205ENST00000546947 HIRAP54198 1017 aaPredicted RBP18.53■□□□□ 0.56
CCDC38-205ENST00000546947 INTS3Q68E01 1043 aaKnown RBP18.53■□□□□ 0.56
CCDC38-205ENST00000546947 MROH5Q6ZUA9 1318 aa18.52■□□□□ 0.56
CCDC38-205ENST00000546947 STRIP1Q5VSL9 837 aa18.52■□□□□ 0.56
CCDC38-205ENST00000546947 SAMD7Q7Z3H4 446 aa18.52■□□□□ 0.56
CCDC38-205ENST00000546947 GMLQ99445 158 aa18.52■□□□□ 0.56
CCDC38-205ENST00000546947 CD209Q9NNX6 404 aa18.52■□□□□ 0.56
CCDC38-205ENST00000546947 RIPOR2Q9Y4F9 1068 aa18.52■□□□□ 0.56
CCDC38-205ENST00000546947 MYO3BQ8WXR4 1341 aa18.51■□□□□ 0.55
CCDC38-205ENST00000546947 SNAP23O00161 211 aa18.51■□□□□ 0.55
CCDC38-205ENST00000546947 PLIN1O60240 522 aa18.51■□□□□ 0.55
CCDC38-205ENST00000546947 TRIM27P14373 513 aa18.51■□□□□ 0.55
CCDC38-205ENST00000546947 UBE4AQ14139 1066 aa18.51■□□□□ 0.55
CCDC38-205ENST00000546947 DACT2Q5SW24 774 aa18.51■□□□□ 0.55
CCDC38-205ENST00000546947 ATF7IPQ6VMQ6 1270 aa18.51■□□□□ 0.55
CCDC38-205ENST00000546947 FRAT1Q92837 279 aaPredicted RBP18.51■□□□□ 0.55
CCDC38-205ENST00000546947 PUS3Q9BZE2 481 aaKnown RBP18.51■□□□□ 0.55
CCDC38-205ENST00000546947 POLR2AP24928 1970 aaKnown RBP18.5■□□□□ 0.55
CCDC38-205ENST00000546947 ZNF280AP59817 542 aaPredicted RBP18.5■□□□□ 0.55
CCDC38-205ENST00000546947 KIF4BQ2VIQ3 1234 aa18.5■□□□□ 0.55
CCDC38-205ENST00000546947 TBC1D10BQ4KMP7 808 aaPredicted RBP18.5■□□□□ 0.55
CCDC38-205ENST00000546947 TTLL5Q6EMB2 1281 aa18.5■□□□□ 0.55
CCDC38-205ENST00000546947 ZNF804AQ7Z570 1209 aa18.5■□□□□ 0.55
CCDC38-205ENST00000546947 FBXW7Q969H0 707 aa18.5■□□□□ 0.55
CCDC38-205ENST00000546947 GNAI3P08754 354 aa18.49■□□□□ 0.55
CCDC38-205ENST00000546947 USP17L8P0C7I0 530 aa18.49■□□□□ 0.55
CCDC38-205ENST00000546947 MMP14P50281 582 aa18.49■□□□□ 0.55
CCDC38-205ENST00000546947 LRRC24Q50LG9 513 aa18.49■□□□□ 0.55
CCDC38-205ENST00000546947 CDC37L1Q7L3B6 337 aa18.49■□□□□ 0.55
CCDC38-205ENST00000546947 JMYQ8N9B5 988 aa18.49■□□□□ 0.55
CCDC38-205ENST00000546947 EGFRP00533 1210 aa18.48■□□□□ 0.55
CCDC38-205ENST00000546947 IL1R1P14778 569 aa18.48■□□□□ 0.55
CCDC38-205ENST00000546947 RFX5P48382 616 aaPredicted RBP18.48■□□□□ 0.55
CCDC38-205ENST00000546947 METTL24Q5JXM2 366 aa18.48■□□□□ 0.55
CCDC38-205ENST00000546947 RBM26Q5T8P6 1007 aaKnown RBP18.48■□□□□ 0.55
CCDC38-205ENST00000546947 ZKSCAN2Q63HK3 967 aa18.48■□□□□ 0.55
CCDC38-205ENST00000546947 MEIS3Q99687 375 aa18.48■□□□□ 0.55
CCDC38-205ENST00000546947 GTF2IP78347 998 aa18.47■□□□□ 0.55
CCDC38-205ENST00000546947 PTPN12Q05209 780 aaKnown RBP18.47■□□□□ 0.55
CCDC38-205ENST00000546947 KLHDC4Q8TBB5 520 aa18.47■□□□□ 0.55
CCDC38-205ENST00000546947 GLIS2Q9BZE0 524 aaPredicted RBP18.47■□□□□ 0.55
CCDC38-205ENST00000546947 LRRFIP2Q9Y608 721 aaKnown RBP18.47■□□□□ 0.55
CCDC38-205ENST00000546947 CNTNAP1P78357 1384 aa18.46■□□□□ 0.55
CCDC38-205ENST00000546947 TRAF5O00463 557 aa18.46■□□□□ 0.55
CCDC38-205ENST00000546947 PDE8BO95263 885 aa18.46■□□□□ 0.55
CCDC38-205ENST00000546947 DCPSQ96C86 337 aaKnown RBP18.46■□□□□ 0.55
CCDC38-205ENST00000546947 MYOZ2Q9NPC6 264 aa18.46■□□□□ 0.55
CCDC38-205ENST00000546947 FBXO3Q9UK99 471 aa18.46■□□□□ 0.55
CCDC38-205ENST00000546947 EYA2O00167 538 aa18.45■□□□□ 0.54
CCDC38-205ENST00000546947 FMR1Q06787 632 aaKnown RBP eCLIP18.45■□□□□ 0.54
CCDC38-205ENST00000546947 OGFOD1Q8N543 542 aa18.45■□□□□ 0.54
CCDC38-205ENST00000546947 VGLL2Q8N8G2 317 aa18.45■□□□□ 0.54
CCDC38-205ENST00000546947 CLUAP1Q96AJ1 413 aa18.45■□□□□ 0.54
CCDC38-205ENST00000546947 MXD3Q9BW11 206 aa18.45■□□□□ 0.54
CCDC38-205ENST00000546947 MKRN1Q9UHC7 482 aaKnown RBP18.45■□□□□ 0.54
CCDC38-205ENST00000546947 TNNQ9UQP3 1299 aa18.45■□□□□ 0.54
CCDC38-205ENST00000546947 HIBADHP31937 336 aaKnown RBP18.44■□□□□ 0.54
CCDC38-205ENST00000546947 FKBP1AP62942 108 aaKnown RBP18.44■□□□□ 0.54
CCDC38-205ENST00000546947 CST9Q5W186 159 aa18.44■□□□□ 0.54
CCDC38-205ENST00000546947 HDAC9Q9UKV0 1011 aa18.44■□□□□ 0.54
CCDC38-205ENST00000546947 ARAP2Q8WZ64 1704 aa18.43■□□□□ 0.54
CCDC38-205ENST00000546947 RASSF10A6NK89 507 aa18.43■□□□□ 0.54
CCDC38-205ENST00000546947 SCARF1Q14162 830 aa18.43■□□□□ 0.54
CCDC38-205ENST00000546947 USP48Q86UV5 1035 aa18.43■□□□□ 0.54
CCDC38-205ENST00000546947 TDRD7Q8NHU6 1098 aaKnown RBP18.43■□□□□ 0.54
CCDC38-205ENST00000546947 CNKSR2Q8WXI2 1034 aa18.43■□□□□ 0.54
CCDC38-205ENST00000546947 FAM84BQ96KN1 310 aaPredicted RBP18.43■□□□□ 0.54
CCDC38-205ENST00000546947 GGA3Q9NZ52 723 aa18.43■□□□□ 0.54
CCDC38-205ENST00000546947 PCNTO95613 3336 aa18.43■□□□□ 0.54
CCDC38-205ENST00000546947 CIAO1O76071 339 aa18.42■□□□□ 0.54
CCDC38-205ENST00000546947 SASH1O94885 1247 aa18.42■□□□□ 0.54
CCDC38-205ENST00000546947 CELF2O95319 508 aaKnown RBP18.42■□□□□ 0.54
CCDC38-205ENST00000546947 GYG1P46976 350 aa18.42■□□□□ 0.54
CCDC38-205ENST00000546947 PUM3Q15397 648 aaKnown RBP18.42■□□□□ 0.54
CCDC38-205ENST00000546947 DEFB115Q30KQ5 88 aa18.42■□□□□ 0.54
CCDC38-205ENST00000546947 CAVIN4Q5BKX8 364 aa18.42■□□□□ 0.54
CCDC38-205ENST00000546947 KRT26Q7Z3Y9 468 aa18.42■□□□□ 0.54
CCDC38-205ENST00000546947 TMEM57Q8N5G2 664 aa18.42■□□□□ 0.54
CCDC38-205ENST00000546947 ABT1Q9ULW3 272 aaKnown RBP18.42■□□□□ 0.54
CCDC38-205ENST00000546947 FAM205AQ6ZU69 1335 aa18.42■□□□□ 0.54
CCDC38-205ENST00000546947 PITPNM2Q9BZ72 1349 aa18.42■□□□□ 0.54
CCDC38-205ENST00000546947 ECM29Q5VYK3 1845 aa18.42■□□□□ 0.54
CCDC38-205ENST00000546947 GNAI2P04899 355 aa18.41■□□□□ 0.54
CCDC38-205ENST00000546947 IFIT1P09914 478 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms