RNA–Protein interactions for RNA: ENST00000546546.1

NOVA1-207, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 4

Gene NOVA1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-207ENST00000546546 VIL1P09327 827 aaKnown RBP16.31■□□□□ 0.2
NOVA1-207ENST00000546546 METTL24Q5JXM2 366 aa16.31■□□□□ 0.2
NOVA1-207ENST00000546546 USP50Q70EL3 339 aaPredicted RBP16.31■□□□□ 0.2
NOVA1-207ENST00000546546 USP17L1Q7RTZ2 530 aa16.31■□□□□ 0.2
NOVA1-207ENST00000546546 MXD3Q9BW11 206 aa16.31■□□□□ 0.2
NOVA1-207ENST00000546546 SIL1Q9H173 461 aa16.31■□□□□ 0.2
NOVA1-207ENST00000546546 HDAC5Q9UQL6 1122 aa16.31■□□□□ 0.2
NOVA1-207ENST00000546546 RIPOR2Q9Y4F9 1068 aa16.31■□□□□ 0.2
NOVA1-207ENST00000546546 MYH3P11055 1940 aa16.3■□□□□ 0.2
NOVA1-207ENST00000546546 TBC1D10BQ4KMP7 808 aaPredicted RBP16.3■□□□□ 0.2
NOVA1-207ENST00000546546 RSBN1LQ6PCB5 846 aaPredicted RBP16.3■□□□□ 0.2
NOVA1-207ENST00000546546 SAMD7Q7Z3H4 446 aa16.3■□□□□ 0.2
NOVA1-207ENST00000546546 DZIP1LQ8IYY4 767 aaKnown RBP16.3■□□□□ 0.2
NOVA1-207ENST00000546546 CNTROBQ8N137 903 aa16.3■□□□□ 0.2
NOVA1-207ENST00000546546 TRPM4Q8TD43 1214 aa16.3■□□□□ 0.2
NOVA1-207ENST00000546546 DPF2Q92785 391 aa16.3■□□□□ 0.2
NOVA1-207ENST00000546546 LTBP1Q14766 1721 aa16.3■□□□□ 0.2
NOVA1-207ENST00000546546 MROH5Q6ZUA9 1318 aa16.29■□□□□ 0.2
NOVA1-207ENST00000546546 RPS12P25398 132 aaKnown RBP16.29■□□□□ 0.2
NOVA1-207ENST00000546546 RFX5P48382 616 aaPredicted RBP16.29■□□□□ 0.2
NOVA1-207ENST00000546546 HIRAP54198 1017 aaPredicted RBP16.29■□□□□ 0.2
NOVA1-207ENST00000546546 ITPRIPQ8IWB1 547 aa16.29■□□□□ 0.2
NOVA1-207ENST00000546546 CD209Q9NNX6 404 aa16.29■□□□□ 0.2
NOVA1-207ENST00000546546 RLBP1P12271 317 aa16.28■□□□□ 0.2
NOVA1-207ENST00000546546 GTF2IP78347 998 aa16.28■□□□□ 0.2
NOVA1-207ENST00000546546 PTPN12Q05209 780 aaKnown RBP16.28■□□□□ 0.2
NOVA1-207ENST00000546546 TTLL5Q6EMB2 1281 aa16.28■□□□□ 0.2
NOVA1-207ENST00000546546 ZNF804AQ7Z570 1209 aa16.28■□□□□ 0.2
NOVA1-207ENST00000546546 PA2G4Q9UQ80 394 aaKnown RBP16.28■□□□□ 0.2
NOVA1-207ENST00000546546 SPEF2Q9C093 1822 aa16.28■□□□□ 0.2
NOVA1-207ENST00000546546 EYA2O00167 538 aa16.27■□□□□ 0.2
NOVA1-207ENST00000546546 EGFRP00533 1210 aa16.27■□□□□ 0.2
NOVA1-207ENST00000546546 GNAI2P04899 355 aa16.27■□□□□ 0.2
NOVA1-207ENST00000546546 GYG1P46976 350 aa16.27■□□□□ 0.2
NOVA1-207ENST00000546546 UBE4AQ14139 1066 aa16.27■□□□□ 0.2
NOVA1-207ENST00000546546 AGBL3Q8NEM8 1001 aa16.27■□□□□ 0.2
NOVA1-207ENST00000546546 PANK1Q8TE04 598 aa16.27■□□□□ 0.2
NOVA1-207ENST00000546546 RCAN3Q9UKA8 241 aa16.27■□□□□ 0.2
NOVA1-207ENST00000546546 JAG2Q9Y219 1238 aa16.27■□□□□ 0.2
NOVA1-207ENST00000546546 SRGAP3O43295 1099 aa16.26■□□□□ 0.19
NOVA1-207ENST00000546546 PDE8BO95263 885 aa16.26■□□□□ 0.19
NOVA1-207ENST00000546546 ITGBL1O95965 494 aaPredicted RBP16.26■□□□□ 0.19
NOVA1-207ENST00000546546 FMR1Q06787 632 aaKnown RBP eCLIP16.26■□□□□ 0.19
NOVA1-207ENST00000546546 DACT2Q5SW24 774 aa16.26■□□□□ 0.19
NOVA1-207ENST00000546546 STRIP1Q5VSL9 837 aa16.26■□□□□ 0.19
NOVA1-207ENST00000546546 C15orf52Q6ZUT6 534 aaKnown RBP16.26■□□□□ 0.19
NOVA1-207ENST00000546546 IRS2Q9Y4H2 1338 aa16.25■□□□□ 0.19
NOVA1-207ENST00000546546 SCN4AP35499 1836 aa16.25■□□□□ 0.19
NOVA1-207ENST00000546546 TRAF5O00463 557 aa16.25■□□□□ 0.19
NOVA1-207ENST00000546546 USP17L8P0C7I0 530 aa16.25■□□□□ 0.19
NOVA1-207ENST00000546546 HIBADHP31937 336 aaKnown RBP16.25■□□□□ 0.19
NOVA1-207ENST00000546546 KIF4BQ2VIQ3 1234 aa16.25■□□□□ 0.19
NOVA1-207ENST00000546546 VPS37DQ86XT2 251 aa16.25■□□□□ 0.19
NOVA1-207ENST00000546546 C1orf115Q9H7X2 142 aa16.25■□□□□ 0.19
NOVA1-207ENST00000546546 ATG9AQ7Z3C6 839 aa16.24■□□□□ 0.19
NOVA1-207ENST00000546546 VGLL2Q8N8G2 317 aa16.24■□□□□ 0.19
NOVA1-207ENST00000546546 FAM84BQ96KN1 310 aaPredicted RBP16.24■□□□□ 0.19
NOVA1-207ENST00000546546 GMLQ99445 158 aa16.24■□□□□ 0.19
NOVA1-207ENST00000546546 GLIS2Q9BZE0 524 aaPredicted RBP16.24■□□□□ 0.19
NOVA1-207ENST00000546546 IQSEC3Q9UPP2 1182 aaPredicted RBP16.24■□□□□ 0.19
NOVA1-207ENST00000546546 PASKQ96RG2 1323 aa16.23■□□□□ 0.19
NOVA1-207ENST00000546546 F8W031 263 aaPredicted RBP16.23■□□□□ 0.19
NOVA1-207ENST00000546546 FRAT2O75474 233 aaPredicted RBP16.23■□□□□ 0.19
NOVA1-207ENST00000546546 IFIT1P09914 478 aaKnown RBP16.23■□□□□ 0.19
NOVA1-207ENST00000546546 IL1R1P14778 569 aa16.23■□□□□ 0.19
NOVA1-207ENST00000546546 PUM3Q15397 648 aaKnown RBP16.23■□□□□ 0.19
NOVA1-207ENST00000546546 CAVIN4Q5BKX8 364 aa16.23■□□□□ 0.19
NOVA1-207ENST00000546546 KIAA0825Q8IV33 1275 aa16.23■□□□□ 0.19
NOVA1-207ENST00000546546 OGFOD1Q8N543 542 aa16.23■□□□□ 0.19
NOVA1-207ENST00000546546 CEP126Q9P2H0 1117 aa16.23■□□□□ 0.19
NOVA1-207ENST00000546546 ASTN2O75129 1339 aaPredicted RBP16.22■□□□□ 0.19
NOVA1-207ENST00000546546 PNMA6EA0A0J9YXQ4 647 aa16.22■□□□□ 0.19
NOVA1-207ENST00000546546 ZBTB7BO15156 539 aaPredicted RBP16.22■□□□□ 0.19
NOVA1-207ENST00000546546 BCAMP50895 628 aa16.22■□□□□ 0.19
NOVA1-207ENST00000546546 ZNF280AP59817 542 aaPredicted RBP16.22■□□□□ 0.19
NOVA1-207ENST00000546546 SCARF1Q14162 830 aa16.22■□□□□ 0.19
NOVA1-207ENST00000546546 DLK2Q6UY11 383 aa16.22■□□□□ 0.19
NOVA1-207ENST00000546546 USP48Q86UV5 1035 aa16.22■□□□□ 0.19
NOVA1-207ENST00000546546 MYOZ2Q9NPC6 264 aa16.22■□□□□ 0.19
NOVA1-207ENST00000546546 TMEM88BA6NKF7 163 aa16.21■□□□□ 0.19
NOVA1-207ENST00000546546 CIAO1O76071 339 aa16.21■□□□□ 0.19
NOVA1-207ENST00000546546 MS4A1P11836 297 aa16.21■□□□□ 0.19
NOVA1-207ENST00000546546 SLC5A1P13866 664 aa16.21■□□□□ 0.19
NOVA1-207ENST00000546546 IL15P40933 162 aaPredicted RBP16.21■□□□□ 0.19
NOVA1-207ENST00000546546 CHAF1AQ13111 956 aaPredicted RBP16.21■□□□□ 0.19
NOVA1-207ENST00000546546 FBXO33Q7Z6M2 555 aa16.21■□□□□ 0.19
NOVA1-207ENST00000546546 DNAJC5GQ8N7S2 189 aa16.21■□□□□ 0.19
NOVA1-207ENST00000546546 ZC3H15Q8WU90 426 aaKnown RBP16.21■□□□□ 0.19
NOVA1-207ENST00000546546 DCPSQ96C86 337 aaKnown RBP16.21■□□□□ 0.19
NOVA1-207ENST00000546546 ZNF408Q9H9D4 720 aa16.21■□□□□ 0.19
NOVA1-207ENST00000546546 COPRSQ9NQ92 184 aa16.21■□□□□ 0.19
NOVA1-207ENST00000546546 PGAP2Q9UHJ9 254 aa16.21■□□□□ 0.19
NOVA1-207ENST00000546546 MYO3BQ8WXR4 1341 aa16.2■□□□□ 0.18
NOVA1-207ENST00000546546 SASH1O94885 1247 aa16.2■□□□□ 0.18
NOVA1-207ENST00000546546 FGFR2P21802 821 aa16.2■□□□□ 0.18
NOVA1-207ENST00000546546 MTX1Q13505 466 aa16.2■□□□□ 0.18
NOVA1-207ENST00000546546 CDC37L1Q7L3B6 337 aa16.2■□□□□ 0.18
NOVA1-207ENST00000546546 CERS5Q8N5B7 392 aa16.2■□□□□ 0.18
NOVA1-207ENST00000546546 TDRD7Q8NHU6 1098 aaKnown RBP16.2■□□□□ 0.18
NOVA1-207ENST00000546546 LPIN2Q92539 896 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms