RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 ASAP1Q9ULH1 1129 aa11.41□□□□□ -0.58
TRAF1-203ENST00000546084 B4E1Z4 1266 aa11.41□□□□□ -0.58
TRAF1-203ENST00000546084 CCDC112Q8NEF3 446 aa11.41□□□□□ -0.58
TRAF1-203ENST00000546084 AIFM3Q96NN9 605 aa11.41□□□□□ -0.58
TRAF1-203ENST00000546084 NAPBQ9H115 298 aa11.41□□□□□ -0.58
TRAF1-203ENST00000546084 FRMPD1Q5SYB0 1578 aa11.41□□□□□ -0.58
TRAF1-203ENST00000546084 IFIT3O14879 490 aaKnown RBP11.4□□□□□ -0.58
TRAF1-203ENST00000546084 PRC1O43663 620 aa11.4□□□□□ -0.58
TRAF1-203ENST00000546084 KIAA1524Q8TCG1 905 aa11.4□□□□□ -0.58
TRAF1-203ENST00000546084 PHKG2P15735 406 aa11.4□□□□□ -0.58
TRAF1-203ENST00000546084 ARID5BQ14865 1188 aa11.4□□□□□ -0.58
TRAF1-203ENST00000546084 ATP2B3Q16720 1220 aa11.4□□□□□ -0.58
TRAF1-203ENST00000546084 ZNF710Q8N1W2 664 aa11.4□□□□□ -0.58
TRAF1-203ENST00000546084 ZNF396Q96N95 335 aaPredicted RBP11.4□□□□□ -0.58
TRAF1-203ENST00000546084 UIMC1Q96RL1 719 aa11.4□□□□□ -0.58
TRAF1-203ENST00000546084 WWC3Q9ULE0 1092 aa11.4□□□□□ -0.58
TRAF1-203ENST00000546084 RPAP1Q9BWH6 1393 aaPredicted RBP11.4□□□□□ -0.58
TRAF1-203ENST00000546084 CRB1P82279 1406 aa11.4□□□□□ -0.58
TRAF1-203ENST00000546084 CCDC69A6NI79 296 aa11.4□□□□□ -0.58
TRAF1-203ENST00000546084 CYP27B1O15528 508 aa11.4□□□□□ -0.58
TRAF1-203ENST00000546084 TNNT3P45378 269 aaPredicted RBP11.4□□□□□ -0.58
TRAF1-203ENST00000546084 TMC6Q7Z403 805 aa11.4□□□□□ -0.58
TRAF1-203ENST00000546084 LEO1Q8WVC0 666 aaPredicted RBP11.4□□□□□ -0.58
TRAF1-203ENST00000546084 REREQ9P2R6 1566 aa11.4□□□□□ -0.59
TRAF1-203ENST00000546084 SSH2Q76I76 1423 aa11.4□□□□□ -0.59
TRAF1-203ENST00000546084 TRERF1Q96PN7 1200 aa11.39□□□□□ -0.59
TRAF1-203ENST00000546084 SALL3Q9BXA9 1300 aa11.39□□□□□ -0.59
TRAF1-203ENST00000546084 STARD3NLO95772 234 aa11.39□□□□□ -0.59
TRAF1-203ENST00000546084 ADD1P35611 737 aaKnown RBP11.39□□□□□ -0.59
TRAF1-203ENST00000546084 SAFBQ15424 915 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRAF1-203ENST00000546084 STAMQ92783 540 aa11.39□□□□□ -0.59
TRAF1-203ENST00000546084 CBX8Q9HC52 389 aa11.39□□□□□ -0.59
TRAF1-203ENST00000546084 PRDM4Q9UKN5 801 aa11.39□□□□□ -0.59
TRAF1-203ENST00000546084 AP5Z1O43299 807 aa11.39□□□□□ -0.59
TRAF1-203ENST00000546084 COBLO75128 1261 aa11.39□□□□□ -0.59
TRAF1-203ENST00000546084 SIRT1Q96EB6 747 aa11.39□□□□□ -0.59
TRAF1-203ENST00000546084 TTC14Q96N46 770 aa11.39□□□□□ -0.59
TRAF1-203ENST00000546084 USP28Q96RU2 1077 aa11.39□□□□□ -0.59
TRAF1-203ENST00000546084 BTG4Q9NY30 223 aa11.39□□□□□ -0.59
TRAF1-203ENST00000546084 ATP2B2Q01814 1243 aa11.38□□□□□ -0.59
TRAF1-203ENST00000546084 CEP57L1Q8IYX8 460 aa11.38□□□□□ -0.59
TRAF1-203ENST00000546084 XAGE2Q96GT9 111 aa11.38□□□□□ -0.59
TRAF1-203ENST00000546084 ARHGAP31Q2M1Z3 1444 aa11.38□□□□□ -0.59
TRAF1-203ENST00000546084 GOLGA8FQ08AF8 430 aa11.38□□□□□ -0.59
TRAF1-203ENST00000546084 GOLGA8DPQ0D2H9 430 aa11.38□□□□□ -0.59
TRAF1-203ENST00000546084 LRRFIP1Q32MZ4 808 aaKnown RBP11.38□□□□□ -0.59
TRAF1-203ENST00000546084 TMEM67Q5HYA8 995 aa11.38□□□□□ -0.59
TRAF1-203ENST00000546084 TMEM87AQ8NBN3 555 aa11.38□□□□□ -0.59
TRAF1-203ENST00000546084 DCAF5Q96JK2 942 aa11.38□□□□□ -0.59
TRAF1-203ENST00000546084 KCNF1Q9H3M0 494 aa11.38□□□□□ -0.59
TRAF1-203ENST00000546084 DIP2CQ9Y2E4 1556 aa11.38□□□□□ -0.59
TRAF1-203ENST00000546084 ADCY9O60503 1353 aa11.38□□□□□ -0.59
TRAF1-203ENST00000546084 FAM170AA1A519 330 aa11.38□□□□□ -0.59
TRAF1-203ENST00000546084 CTDSPL2Q05D32 466 aa11.38□□□□□ -0.59
TRAF1-203ENST00000546084 DHX32Q7L7V1 743 aaKnown RBP11.38□□□□□ -0.59
TRAF1-203ENST00000546084 PCMTD1Q96MG8 357 aaPredicted RBP11.38□□□□□ -0.59
TRAF1-203ENST00000546084 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.38□□□□□ -0.59
TRAF1-203ENST00000546084 KNDC1Q76NI1 1749 aa11.38□□□□□ -0.59
TRAF1-203ENST00000546084 ERICH4A6NGS2 130 aa11.37□□□□□ -0.59
TRAF1-203ENST00000546084 AFMP43652 599 aa11.37□□□□□ -0.59
TRAF1-203ENST00000546084 IRX3P78415 501 aaPredicted RBP11.37□□□□□ -0.59
TRAF1-203ENST00000546084 PTPN12Q05209 780 aaKnown RBP11.37□□□□□ -0.59
TRAF1-203ENST00000546084 SCRN1Q12765 414 aa11.37□□□□□ -0.59
TRAF1-203ENST00000546084 NAA30Q147X3 362 aaPredicted RBP11.37□□□□□ -0.59
TRAF1-203ENST00000546084 EEF2KMTQ96G04 330 aa11.37□□□□□ -0.59
TRAF1-203ENST00000546084 ZSWIM6Q9HCJ5 1215 aa11.37□□□□□ -0.59
TRAF1-203ENST00000546084 GOLGA8AA7E2F4 631 aa11.37□□□□□ -0.59
TRAF1-203ENST00000546084 STX17P56962 302 aa11.37□□□□□ -0.59
TRAF1-203ENST00000546084 AOX1Q06278 1338 aa11.37□□□□□ -0.59
TRAF1-203ENST00000546084 ANKRD18BA2A2Z9 1011 aa11.37□□□□□ -0.59
TRAF1-203ENST00000546084 ERCC3P19447 782 aa11.37□□□□□ -0.59
TRAF1-203ENST00000546084 POLA2Q14181 598 aa11.37□□□□□ -0.59
TRAF1-203ENST00000546084 PLIN2Q99541 437 aa11.37□□□□□ -0.59
TRAF1-203ENST00000546084 SLC3A2P08195 630 aaKnown RBP11.36□□□□□ -0.59
TRAF1-203ENST00000546084 SKILP12757 684 aa11.36□□□□□ -0.59
TRAF1-203ENST00000546084 ITGA6P23229 1130 aa11.36□□□□□ -0.59
TRAF1-203ENST00000546084 METAP2P50579 478 aaKnown RBP eCLIP11.36□□□□□ -0.59
TRAF1-203ENST00000546084 MAGEB6Q8N7X4 407 aa11.36□□□□□ -0.59
TRAF1-203ENST00000546084 MAP4K1Q92918 833 aa11.36□□□□□ -0.59
TRAF1-203ENST00000546084 UBAC1Q9BSL1 405 aa11.36□□□□□ -0.59
TRAF1-203ENST00000546084 ALG1Q9BT22 464 aa11.36□□□□□ -0.59
TRAF1-203ENST00000546084 EYA2O00167 538 aa11.36□□□□□ -0.59
TRAF1-203ENST00000546084 IRS4O14654 1257 aaPredicted RBP11.36□□□□□ -0.59
TRAF1-203ENST00000546084 ARMT1Q9H993 441 aa11.36□□□□□ -0.59
TRAF1-203ENST00000546084 RNF216Q9NWF9 866 aaPredicted RBP11.36□□□□□ -0.59
TRAF1-203ENST00000546084 CEP170BQ9Y4F5 1589 aaPredicted RBP11.36□□□□□ -0.59
TRAF1-203ENST00000546084 E7EWF7 191 aa11.36□□□□□ -0.59
TRAF1-203ENST00000546084 RNF113AO15541 343 aaKnown RBP11.36□□□□□ -0.59
TRAF1-203ENST00000546084 DMTNQ08495 405 aa11.36□□□□□ -0.59
TRAF1-203ENST00000546084 DENND2AQ9ULE3 1009 aa11.36□□□□□ -0.59
TRAF1-203ENST00000546084 KCNJ14Q9UNX9 436 aa11.36□□□□□ -0.59
TRAF1-203ENST00000546084 MRVI1Q9Y6F6 885 aa11.36□□□□□ -0.59
TRAF1-203ENST00000546084 PTPRUQ92729 1446 aa11.36□□□□□ -0.59
TRAF1-203ENST00000546084 GPAA1O43292 621 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 MARCH6O60337 910 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 HSPD1P10809 573 aaKnown RBP11.35□□□□□ -0.59
TRAF1-203ENST00000546084 IL15P40933 162 aaPredicted RBP11.35□□□□□ -0.59
TRAF1-203ENST00000546084 NECTIN1Q15223 517 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 OLFM4Q6UX06 510 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 KBTBD3Q8NAB2 608 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms