RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 ZNF165P49910 485 aa17.98■□□□□ 0.47
CNN3-207ENST00000545882 CEBPZQ03701 1054 aaKnown RBP17.98■□□□□ 0.47
CNN3-207ENST00000545882 LRMPQ12912 555 aa17.98■□□□□ 0.47
CNN3-207ENST00000545882 DDX60Q8IY21 1712 aaKnown RBP17.98■□□□□ 0.47
CNN3-207ENST00000545882 SHANK3Q9BYB0 1731 aa17.98■□□□□ 0.47
CNN3-207ENST00000545882 PTPDC1A2A3K4 754 aa17.98■□□□□ 0.47
CNN3-207ENST00000545882 E7EWF7 191 aa17.98■□□□□ 0.47
CNN3-207ENST00000545882 HSPD1P10809 573 aaKnown RBP17.98■□□□□ 0.47
CNN3-207ENST00000545882 FOSBP53539 338 aa17.98■□□□□ 0.47
CNN3-207ENST00000545882 IQCB1Q15051 598 aa17.98■□□□□ 0.47
CNN3-207ENST00000545882 LRRC24Q50LG9 513 aa17.98■□□□□ 0.47
CNN3-207ENST00000545882 GOLPH3LQ9H4A5 285 aa17.98■□□□□ 0.47
CNN3-207ENST00000545882 COL5A2P05997 1499 aaPredicted RBP17.97■□□□□ 0.47
CNN3-207ENST00000545882 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.97■□□□□ 0.47
CNN3-207ENST00000545882 ZNF594Q96JF6 807 aaPredicted RBP17.97■□□□□ 0.47
CNN3-207ENST00000545882 TRIM5Q9C035 493 aa17.97■□□□□ 0.47
CNN3-207ENST00000545882 MAST3O60307 1309 aa17.97■□□□□ 0.47
CNN3-207ENST00000545882 SOS2Q07890 1332 aaPredicted RBP17.97■□□□□ 0.47
CNN3-207ENST00000545882 WDR17Q8IZU2 1322 aa17.97■□□□□ 0.47
CNN3-207ENST00000545882 CCT2P78371 535 aaKnown RBP17.96■□□□□ 0.47
CNN3-207ENST00000545882 FGD1P98174 961 aa17.96■□□□□ 0.47
CNN3-207ENST00000545882 SNW1Q13573 536 aaKnown RBP17.96■□□□□ 0.47
CNN3-207ENST00000545882 C11orf57Q6ZUT1 292 aaPredicted RBP17.96■□□□□ 0.47
CNN3-207ENST00000545882 ILDR1Q86SU0 546 aaPredicted RBP17.96■□□□□ 0.47
CNN3-207ENST00000545882 USP28Q96RU2 1077 aa17.96■□□□□ 0.47
CNN3-207ENST00000545882 NCOA5Q9HCD5 579 aaKnown RBP17.96■□□□□ 0.47
CNN3-207ENST00000545882 CWC25Q9NXE8 425 aaPredicted RBP17.96■□□□□ 0.47
CNN3-207ENST00000545882 KIF3AQ9Y496 699 aa17.96■□□□□ 0.47
CNN3-207ENST00000545882 KCPQ6ZWJ8 1503 aa17.96■□□□□ 0.47
CNN3-207ENST00000545882 RIOK3O14730 519 aaKnown RBP17.96■□□□□ 0.47
CNN3-207ENST00000545882 IL15P40933 162 aaPredicted RBP17.96■□□□□ 0.47
CNN3-207ENST00000545882 ZSCAN25Q6NSZ9 544 aa17.96■□□□□ 0.47
CNN3-207ENST00000545882 TICAM2Q86XR7 235 aa17.96■□□□□ 0.47
CNN3-207ENST00000545882 CCAR1Q8IX12 1150 aaKnown RBP17.96■□□□□ 0.47
CNN3-207ENST00000545882 BCL2L12Q9HB09 334 aa17.96■□□□□ 0.47
CNN3-207ENST00000545882 MYH7P12883 1935 aa17.95■□□□□ 0.46
CNN3-207ENST00000545882 M0R2C6 588 aa17.95■□□□□ 0.46
CNN3-207ENST00000545882 EYA2O00167 538 aa17.95■□□□□ 0.46
CNN3-207ENST00000545882 RNF113AO15541 343 aaKnown RBP17.95■□□□□ 0.46
CNN3-207ENST00000545882 PDIA3P30101 505 aaKnown RBP17.95■□□□□ 0.46
CNN3-207ENST00000545882 CCDC144BQ3MJ40 725 aa17.95■□□□□ 0.46
CNN3-207ENST00000545882 CCDC144CPQ8IYA2 1237 aa17.95■□□□□ 0.46
CNN3-207ENST00000545882 ENGASEQ8NFI3 743 aa17.95■□□□□ 0.46
CNN3-207ENST00000545882 ARID3AQ99856 593 aa17.95■□□□□ 0.46
CNN3-207ENST00000545882 CHST3Q7LGC8 479 aa17.94■□□□□ 0.46
CNN3-207ENST00000545882 PUS3Q9BZE2 481 aaKnown RBP17.94■□□□□ 0.46
CNN3-207ENST00000545882 PPFIA3O75145 1194 aa17.94■□□□□ 0.46
CNN3-207ENST00000545882 A1BGP04217 495 aa17.94■□□□□ 0.46
CNN3-207ENST00000545882 IFIT1P09914 478 aaKnown RBP17.94■□□□□ 0.46
CNN3-207ENST00000545882 FDPSP14324 419 aaKnown RBP17.94■□□□□ 0.46
CNN3-207ENST00000545882 TTLL5Q6EMB2 1281 aa17.94■□□□□ 0.46
CNN3-207ENST00000545882 DRC7Q8IY82 874 aa17.94■□□□□ 0.46
CNN3-207ENST00000545882 ZNF274Q96GC6 653 aaPredicted RBP17.94■□□□□ 0.46
CNN3-207ENST00000545882 CCDC94Q9BW85 323 aaPredicted RBP17.94■□□□□ 0.46
CNN3-207ENST00000545882 DNAJC5Q9H3Z4 198 aa17.94■□□□□ 0.46
CNN3-207ENST00000545882 PCDH11XQ9BZA7 1347 aa17.93■□□□□ 0.46
CNN3-207ENST00000545882 PCDH11YQ9BZA8 1340 aa17.93■□□□□ 0.46
CNN3-207ENST00000545882 A0A1B0GUL7 405 aa17.93■□□□□ 0.46
CNN3-207ENST00000545882 FOXP2O15409 715 aa17.93■□□□□ 0.46
CNN3-207ENST00000545882 CAVIN2O95810 425 aa17.93■□□□□ 0.46
CNN3-207ENST00000545882 CDC25BP30305 580 aa17.93■□□□□ 0.46
CNN3-207ENST00000545882 SARM1Q6SZW1 724 aa17.93■□□□□ 0.46
CNN3-207ENST00000545882 CACTINQ8WUQ7 758 aaKnown RBP17.93■□□□□ 0.46
CNN3-207ENST00000545882 OSBP2Q969R2 916 aa17.92■□□□□ 0.46
CNN3-207ENST00000545882 CTAGE5O15320 804 aa17.92■□□□□ 0.46
CNN3-207ENST00000545882 CIAO1O76071 339 aa17.92■□□□□ 0.46
CNN3-207ENST00000545882 EVCP57679 992 aa17.92■□□□□ 0.46
CNN3-207ENST00000545882 GUCY1B3Q02153 619 aa17.92■□□□□ 0.46
CNN3-207ENST00000545882 CCDC191Q8NCU4 936 aa17.92■□□□□ 0.46
CNN3-207ENST00000545882 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.92■□□□□ 0.46
CNN3-207ENST00000545882 GPHNQ9NQX3 736 aaPredicted RBP17.92■□□□□ 0.46
CNN3-207ENST00000545882 CLIP2Q9UDT6 1046 aa17.92■□□□□ 0.46
CNN3-207ENST00000545882 CARMIL3Q8ND23 1372 aa17.92■□□□□ 0.46
CNN3-207ENST00000545882 A0A087WWV3 80 aa17.91■□□□□ 0.46
CNN3-207ENST00000545882 CTIFO43310 598 aaKnown RBP17.91■□□□□ 0.46
CNN3-207ENST00000545882 NKX1-1Q15270 411 aaPredicted RBP17.91■□□□□ 0.46
CNN3-207ENST00000545882 ATL3Q6DD88 541 aa17.91■□□□□ 0.46
CNN3-207ENST00000545882 FBXL16Q8N461 479 aa17.91■□□□□ 0.46
CNN3-207ENST00000545882 ZNF396Q96N95 335 aaPredicted RBP17.91■□□□□ 0.46
CNN3-207ENST00000545882 ZBTB3Q9H5J0 574 aa17.91■□□□□ 0.46
CNN3-207ENST00000545882 PRDM11Q9NQV5 511 aa17.91■□□□□ 0.46
CNN3-207ENST00000545882 C4AP0C0L4 1744 aa17.91■□□□□ 0.46
CNN3-207ENST00000545882 C4BP0C0L5 1744 aa17.91■□□□□ 0.46
CNN3-207ENST00000545882 STX1AQ16623 288 aa17.9■□□□□ 0.46
CNN3-207ENST00000545882 TNS2Q63HR2 1409 aa17.9■□□□□ 0.46
CNN3-207ENST00000545882 ATG3Q9NT62 314 aa17.9■□□□□ 0.46
CNN3-207ENST00000545882 FAM160A1Q05DH4 1040 aa17.9■□□□□ 0.46
CNN3-207ENST00000545882 DHX40Q8IX18 779 aaKnown RBP17.9■□□□□ 0.46
CNN3-207ENST00000545882 ZCRB1Q8TBF4 217 aaKnown RBP17.9■□□□□ 0.46
CNN3-207ENST00000545882 AKAP11Q9UKA4 1901 aa17.89■□□□□ 0.46
CNN3-207ENST00000545882 NHSL1Q5SYE7 1610 aa17.89■□□□□ 0.45
CNN3-207ENST00000545882 ERVV-2B6SEH9 535 aa17.89■□□□□ 0.45
CNN3-207ENST00000545882 CHAF1AQ13111 956 aaPredicted RBP17.89■□□□□ 0.45
CNN3-207ENST00000545882 ANKRD7Q92527 254 aa17.89■□□□□ 0.45
CNN3-207ENST00000545882 MRFAP1L1Q96HT8 127 aa17.89■□□□□ 0.45
CNN3-207ENST00000545882 NAP1L2Q9ULW6 460 aaPredicted RBP17.89■□□□□ 0.45
CNN3-207ENST00000545882 MYO5AQ9Y4I1 1855 aaKnown RBP17.89■□□□□ 0.45
CNN3-207ENST00000545882 TOGARAM1Q9Y4F4 1720 aa17.89■□□□□ 0.45
CNN3-207ENST00000545882 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.88■□□□□ 0.45
CNN3-207ENST00000545882 ADORA1P30542 326 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms