RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 C15orf52Q6ZUT6 534 aaKnown RBP19.67■□□□□ 0.74
CCDC78-216ENST00000544996 CLUAP1Q96AJ1 413 aa19.67■□□□□ 0.74
CCDC78-216ENST00000544996 MEIS3Q99687 375 aa19.67■□□□□ 0.74
CCDC78-216ENST00000544996 PUS3Q9BZE2 481 aaKnown RBP19.67■□□□□ 0.74
CCDC78-216ENST00000544996 RIPOR2Q9Y4F9 1068 aa19.67■□□□□ 0.74
CCDC78-216ENST00000544996 SNAP23O00161 211 aa19.66■□□□□ 0.74
CCDC78-216ENST00000544996 ZNF804AQ7Z570 1209 aa19.66■□□□□ 0.74
CCDC78-216ENST00000544996 ZC3H15Q8WU90 426 aaKnown RBP19.66■□□□□ 0.74
CCDC78-216ENST00000544996 FBXW7Q969H0 707 aa19.66■□□□□ 0.74
CCDC78-216ENST00000544996 LRRFIP2Q9Y608 721 aaKnown RBP19.66■□□□□ 0.74
CCDC78-216ENST00000544996 SHTN1A0MZ66 631 aa19.65■□□□□ 0.74
CCDC78-216ENST00000544996 HTRA3P83110 453 aa19.65■□□□□ 0.74
CCDC78-216ENST00000544996 UBE4AQ14139 1066 aa19.65■□□□□ 0.74
CCDC78-216ENST00000544996 METTL24Q5JXM2 366 aa19.65■□□□□ 0.74
CCDC78-216ENST00000544996 STRIP1Q5VSL9 837 aa19.65■□□□□ 0.74
CCDC78-216ENST00000544996 FTSJ3Q8IY81 847 aaKnown RBP19.65■□□□□ 0.74
CCDC78-216ENST00000544996 PASKQ96RG2 1323 aa19.65■□□□□ 0.74
CCDC78-216ENST00000544996 USP17L8P0C7I0 530 aa19.64■□□□□ 0.73
CCDC78-216ENST00000544996 LRRC24Q50LG9 513 aa19.64■□□□□ 0.73
CCDC78-216ENST00000544996 RBM26Q5T8P6 1007 aaKnown RBP19.64■□□□□ 0.73
CCDC78-216ENST00000544996 TTLL5Q6EMB2 1281 aa19.64■□□□□ 0.73
CCDC78-216ENST00000544996 SAMD7Q7Z3H4 446 aa19.64■□□□□ 0.73
CCDC78-216ENST00000544996 KLHDC4Q8TBB5 520 aa19.64■□□□□ 0.73
CCDC78-216ENST00000544996 TRPM4Q8TD43 1214 aa19.64■□□□□ 0.73
CCDC78-216ENST00000544996 CD209Q9NNX6 404 aa19.64■□□□□ 0.73
CCDC78-216ENST00000544996 MYO3BQ8WXR4 1341 aa19.64■□□□□ 0.73
CCDC78-216ENST00000544996 ADAMTSL1Q8N6G6 1762 aa19.64■□□□□ 0.73
CCDC78-216ENST00000544996 ZNF609O15014 1411 aa19.63■□□□□ 0.73
CCDC78-216ENST00000544996 HIRAP54198 1017 aaPredicted RBP19.63■□□□□ 0.73
CCDC78-216ENST00000544996 TBC1D10BQ4KMP7 808 aaPredicted RBP19.63■□□□□ 0.73
CCDC78-216ENST00000544996 DACT2Q5SW24 774 aa19.63■□□□□ 0.73
CCDC78-216ENST00000544996 CREBZFQ9NS37 354 aa19.63■□□□□ 0.73
CCDC78-216ENST00000544996 PGAP2Q9UHJ9 254 aa19.63■□□□□ 0.73
CCDC78-216ENST00000544996 TNNQ9UQP3 1299 aa19.63■□□□□ 0.73
CCDC78-216ENST00000544996 IRS2Q9Y4H2 1338 aa19.62■□□□□ 0.73
CCDC78-216ENST00000544996 ZNF280AP59817 542 aaPredicted RBP19.62■□□□□ 0.73
CCDC78-216ENST00000544996 GTF2IP78347 998 aa19.62■□□□□ 0.73
CCDC78-216ENST00000544996 OGFOD1Q8N543 542 aa19.62■□□□□ 0.73
CCDC78-216ENST00000544996 TMEM57Q8N5G2 664 aa19.62■□□□□ 0.73
CCDC78-216ENST00000544996 DNAJC5GQ8N7S2 189 aa19.62■□□□□ 0.73
CCDC78-216ENST00000544996 GMLQ99445 158 aa19.62■□□□□ 0.73
CCDC78-216ENST00000544996 FBXO3Q9UK99 471 aa19.62■□□□□ 0.73
CCDC78-216ENST00000544996 TMEM88BA6NKF7 163 aa19.61■□□□□ 0.73
CCDC78-216ENST00000544996 EYA2O00167 538 aa19.61■□□□□ 0.73
CCDC78-216ENST00000544996 PDE8BO95263 885 aa19.61■□□□□ 0.73
CCDC78-216ENST00000544996 GNAI2P04899 355 aa19.61■□□□□ 0.73
CCDC78-216ENST00000544996 IL1R1P14778 569 aa19.61■□□□□ 0.73
CCDC78-216ENST00000544996 RFX5P48382 616 aaPredicted RBP19.61■□□□□ 0.73
CCDC78-216ENST00000544996 PTPN12Q05209 780 aaKnown RBP19.61■□□□□ 0.73
CCDC78-216ENST00000544996 KIF4BQ2VIQ3 1234 aa19.61■□□□□ 0.73
CCDC78-216ENST00000544996 DZIP1LQ8IYY4 767 aaKnown RBP19.61■□□□□ 0.73
CCDC78-216ENST00000544996 MMP14P50281 582 aa19.6■□□□□ 0.73
CCDC78-216ENST00000544996 CDC37L1Q7L3B6 337 aa19.6■□□□□ 0.73
CCDC78-216ENST00000544996 VPS37DQ86XT2 251 aa19.6■□□□□ 0.73
CCDC78-216ENST00000544996 KLRG1Q96E93 195 aa19.6■□□□□ 0.73
CCDC78-216ENST00000544996 SCN9AQ15858 1988 aa19.6■□□□□ 0.73
CCDC78-216ENST00000544996 CIAO1O76071 339 aa19.59■□□□□ 0.73
CCDC78-216ENST00000544996 HIBADHP31937 336 aaKnown RBP19.59■□□□□ 0.73
CCDC78-216ENST00000544996 PUM3Q15397 648 aaKnown RBP19.59■□□□□ 0.73
CCDC78-216ENST00000544996 CAVIN4Q5BKX8 364 aa19.59■□□□□ 0.73
CCDC78-216ENST00000544996 VGLL2Q8N8G2 317 aa19.59■□□□□ 0.73
CCDC78-216ENST00000544996 DCPSQ96C86 337 aaKnown RBP19.59■□□□□ 0.73
CCDC78-216ENST00000544996 MXD3Q9BW11 206 aa19.59■□□□□ 0.73
CCDC78-216ENST00000544996 SIL1Q9H173 461 aa19.59■□□□□ 0.73
CCDC78-216ENST00000544996 MYOZ2Q9NPC6 264 aa19.59■□□□□ 0.73
CCDC78-216ENST00000544996 SRGAP3O43295 1099 aa19.58■□□□□ 0.72
CCDC78-216ENST00000544996 EGFRP00533 1210 aa19.58■□□□□ 0.72
CCDC78-216ENST00000544996 MS4A1P11836 297 aa19.58■□□□□ 0.72
CCDC78-216ENST00000544996 GYG1P46976 350 aa19.58■□□□□ 0.72
CCDC78-216ENST00000544996 ITPRIPQ8IWB1 547 aa19.58■□□□□ 0.72
CCDC78-216ENST00000544996 FAM84BQ96KN1 310 aaPredicted RBP19.58■□□□□ 0.72
CCDC78-216ENST00000544996 HDAC9Q9UKV0 1011 aa19.58■□□□□ 0.72
CCDC78-216ENST00000544996 TRAF5O00463 557 aa19.57■□□□□ 0.72
CCDC78-216ENST00000544996 SASH1O94885 1247 aa19.57■□□□□ 0.72
CCDC78-216ENST00000544996 IFIT1P09914 478 aaKnown RBP19.57■□□□□ 0.72
CCDC78-216ENST00000544996 MTX1Q13505 466 aa19.57■□□□□ 0.72
CCDC78-216ENST00000544996 GLIS2Q9BZE0 524 aaPredicted RBP19.57■□□□□ 0.72
CCDC78-216ENST00000544996 COPRSQ9NQ92 184 aa19.57■□□□□ 0.72
CCDC78-216ENST00000544996 CEP126Q9P2H0 1117 aa19.57■□□□□ 0.72
CCDC78-216ENST00000544996 CEP350Q5VT06 3117 aa19.57■□□□□ 0.72
CCDC78-216ENST00000544996 IL15P40933 162 aaPredicted RBP19.56■□□□□ 0.72
CCDC78-216ENST00000544996 SCARF1Q14162 830 aa19.56■□□□□ 0.72
CCDC78-216ENST00000544996 ATG9AQ7Z3C6 839 aa19.56■□□□□ 0.72
CCDC78-216ENST00000544996 KRT26Q7Z3Y9 468 aa19.56■□□□□ 0.72
CCDC78-216ENST00000544996 KIAA0825Q8IV33 1275 aa19.56■□□□□ 0.72
CCDC78-216ENST00000544996 TDRD7Q8NHU6 1098 aaKnown RBP19.56■□□□□ 0.72
CCDC78-216ENST00000544996 RCAN3Q9UKA8 241 aa19.56■□□□□ 0.72
CCDC78-216ENST00000544996 FRAT2O75474 233 aaPredicted RBP19.55■□□□□ 0.72
CCDC78-216ENST00000544996 SLC5A1P13866 664 aa19.55■□□□□ 0.72
CCDC78-216ENST00000544996 FKBP1AP62942 108 aaKnown RBP19.55■□□□□ 0.72
CCDC78-216ENST00000544996 FBXO33Q7Z6M2 555 aa19.55■□□□□ 0.72
CCDC78-216ENST00000544996 USP48Q86UV5 1035 aa19.55■□□□□ 0.72
CCDC78-216ENST00000544996 SULF1Q8IWU6 871 aa19.55■□□□□ 0.72
CCDC78-216ENST00000544996 LPIN2Q92539 896 aa19.55■□□□□ 0.72
CCDC78-216ENST00000544996 PA2G4Q9UQ80 394 aaKnown RBP19.55■□□□□ 0.72
CCDC78-216ENST00000544996 RLBP1P12271 317 aa19.54■□□□□ 0.72
CCDC78-216ENST00000544996 FMR1Q06787 632 aaKnown RBP eCLIP19.54■□□□□ 0.72
CCDC78-216ENST00000544996 GGA3Q9NZ52 723 aa19.54■□□□□ 0.72
CCDC78-216ENST00000544996 ABT1Q9ULW3 272 aaKnown RBP19.54■□□□□ 0.72
CCDC78-216ENST00000544996 A0A1B0GUL6 1792 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms