RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 SCN4AP35499 1836 aa5.67□□□□□ -1.5
CNGA1-209ENST00000544810 ERVV-2B6SEH9 535 aa5.67□□□□□ -1.5
CNGA1-209ENST00000544810 LILRB3O75022 631 aa5.67□□□□□ -1.5
CNGA1-209ENST00000544810 ZPR1O75312 459 aa5.67□□□□□ -1.5
CNGA1-209ENST00000544810 GTF2E1P29083 439 aaPredicted RBP5.67□□□□□ -1.5
CNGA1-209ENST00000544810 CNGB1Q14028 1251 aaPredicted RBP5.67□□□□□ -1.5
CNGA1-209ENST00000544810 PUS7Q96PZ0 661 aaKnown RBP5.67□□□□□ -1.5
CNGA1-209ENST00000544810 CCDC94Q9BW85 323 aaPredicted RBP5.67□□□□□ -1.5
CNGA1-209ENST00000544810 VRTNQ9H8Y1 702 aa5.67□□□□□ -1.5
CNGA1-209ENST00000544810 SOS1Q07889 1333 aaPredicted RBP5.67□□□□□ -1.5
CNGA1-209ENST00000544810 DICER1Q9UPY3 1922 aaKnown RBP5.67□□□□□ -1.5
CNGA1-209ENST00000544810 SPTLC1O15269 473 aa5.67□□□□□ -1.5
CNGA1-209ENST00000544810 MSNP26038 577 aaKnown RBP5.67□□□□□ -1.5
CNGA1-209ENST00000544810 GUCA2AQ02747 115 aa5.67□□□□□ -1.5
CNGA1-209ENST00000544810 FMR1Q06787 632 aaKnown RBP eCLIP5.67□□□□□ -1.5
CNGA1-209ENST00000544810 C6orf132Q5T0Z8 1188 aa5.67□□□□□ -1.5
CNGA1-209ENST00000544810 ZNF622Q969S3 477 aaKnown RBP eCLIP5.67□□□□□ -1.5
CNGA1-209ENST00000544810 PDZRN3Q9UPQ7 1066 aa5.67□□□□□ -1.5
CNGA1-209ENST00000544810 NDUFB9Q9Y6M9 179 aa5.67□□□□□ -1.5
CNGA1-209ENST00000544810 MYH14Q7Z406 1995 aaKnown RBP5.66□□□□□ -1.5
CNGA1-209ENST00000544810 FER1L6Q2WGJ9 1857 aa5.66□□□□□ -1.5
CNGA1-209ENST00000544810 RCCD1A6NED2 376 aa5.66□□□□□ -1.5
CNGA1-209ENST00000544810 PTCD1O75127 700 aaKnown RBP5.66□□□□□ -1.5
CNGA1-209ENST00000544810 PLCG2P16885 1265 aa5.66□□□□□ -1.5
CNGA1-209ENST00000544810 DIXDC1Q155Q3 683 aa5.66□□□□□ -1.5
CNGA1-209ENST00000544810 TYW1BQ6NUM6 668 aa5.66□□□□□ -1.5
CNGA1-209ENST00000544810 LRRN4Q8WUT4 740 aa5.66□□□□□ -1.5
CNGA1-209ENST00000544810 SLKQ9H2G2 1235 aaPredicted RBP5.66□□□□□ -1.5
CNGA1-209ENST00000544810 BCL2L12Q9HB09 334 aa5.66□□□□□ -1.5
CNGA1-209ENST00000544810 TNRC18O15417 2968 aaPredicted RBP5.66□□□□□ -1.5
CNGA1-209ENST00000544810 CCDC88AQ3V6T2 1871 aa5.66□□□□□ -1.5
CNGA1-209ENST00000544810 TJP1Q07157 1748 aa5.66□□□□□ -1.5
CNGA1-209ENST00000544810 C3orf80F5H4A9 247 aa5.66□□□□□ -1.5
CNGA1-209ENST00000544810 CD46P15529 392 aa5.66□□□□□ -1.5
CNGA1-209ENST00000544810 ZSCAN20P17040 1043 aaPredicted RBP5.66□□□□□ -1.5
CNGA1-209ENST00000544810 SOGA3Q5TF21 947 aa5.66□□□□□ -1.5
CNGA1-209ENST00000544810 CST9Q5W186 159 aa5.66□□□□□ -1.5
CNGA1-209ENST00000544810 NBPF15Q8N660 670 aa5.66□□□□□ -1.5
CNGA1-209ENST00000544810 ANP32BQ92688 251 aaKnown RBP5.66□□□□□ -1.5
CNGA1-209ENST00000544810 GGNBP2Q9H3C7 697 aa5.66□□□□□ -1.5
CNGA1-209ENST00000544810 NARFQ9UHQ1 456 aa5.66□□□□□ -1.5
CNGA1-209ENST00000544810 PATL2C9JE40 543 aaKnown RBP5.65□□□□□ -1.5
CNGA1-209ENST00000544810 FYB1O15117 783 aa5.65□□□□□ -1.5
CNGA1-209ENST00000544810 PLIN1O60240 522 aa5.65□□□□□ -1.5
CNGA1-209ENST00000544810 DDIT3P35638 169 aa5.65□□□□□ -1.5
CNGA1-209ENST00000544810 SKAP1Q86WV1 359 aa5.65□□□□□ -1.5
CNGA1-209ENST00000544810 PRR7Q8TB68 274 aa5.65□□□□□ -1.5
CNGA1-209ENST00000544810 BRIP1Q9BX63 1249 aa5.65□□□□□ -1.5
CNGA1-209ENST00000544810 TRIM34Q9BYJ4 488 aa5.65□□□□□ -1.5
CNGA1-209ENST00000544810 AFDNP55196 1824 aaKnown RBP5.65□□□□□ -1.5
CNGA1-209ENST00000544810 ZNF521Q96K83 1311 aa5.65□□□□□ -1.5
CNGA1-209ENST00000544810 COL11A2P13942 1736 aaPredicted RBP5.65□□□□□ -1.51
CNGA1-209ENST00000544810 PDE6BP35913 854 aa5.65□□□□□ -1.51
CNGA1-209ENST00000544810 CIAPIN1Q6FI81 312 aa5.65□□□□□ -1.51
CNGA1-209ENST00000544810 PRPF40BQ6NWY9 871 aaKnown RBP5.65□□□□□ -1.51
CNGA1-209ENST00000544810 CDCA7LQ96GN5 454 aa5.65□□□□□ -1.51
CNGA1-209ENST00000544810 EYA1Q99502 592 aa5.65□□□□□ -1.51
CNGA1-209ENST00000544810 FAM198AQ9UFP1 575 aa5.65□□□□□ -1.51
CNGA1-209ENST00000544810 NAP1L2Q9ULW6 460 aaPredicted RBP5.65□□□□□ -1.51
CNGA1-209ENST00000544810 NOL7Q9UMY1 257 aaKnown RBP5.65□□□□□ -1.51
CNGA1-209ENST00000544810 COLQQ9Y215 455 aaPredicted RBP5.65□□□□□ -1.51
CNGA1-209ENST00000544810 COL15A1P39059 1388 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 TRAF5O00463 557 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 HSP90AB1P08238 724 aaKnown RBP5.64□□□□□ -1.51
CNGA1-209ENST00000544810 CABP4P57796 275 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 PPP4R3BQ5MIZ7 849 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 C20orf194Q5TEA3 1177 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 STYK1Q6J9G0 422 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 SASS6Q6UVJ0 657 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 CNKSR1Q969H4 720 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 HHIPL1Q96JK4 782 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 GBP4Q96PP9 640 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 EMILIN1Q9Y6C2 1016 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 PDE3AQ14432 1141 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 DUSP27Q5VZP5 1158 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 CLEC17AQ6ZS10 378 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 SAPCD2Q86UD0 394 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 TRMT2AQ8IZ69 625 aaKnown RBP5.64□□□□□ -1.51
CNGA1-209ENST00000544810 NGEFQ8N5V2 710 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 POLR3GLQ9BT43 218 aa5.64□□□□□ -1.51
CNGA1-209ENST00000544810 UQCRHLA0A096LP55 91 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 UQCRHP07919 91 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 SCNN1AP37088 669 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 FXR1P51114 621 aaKnown RBP eCLIP5.63□□□□□ -1.51
CNGA1-209ENST00000544810 FKBP4Q02790 459 aaKnown RBP eCLIP5.63□□□□□ -1.51
CNGA1-209ENST00000544810 CCDC93Q567U6 631 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 TBC1D9Q6ZT07 1266 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 DNAJC10Q8IXB1 793 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 GPC2Q8N158 579 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 C7orf43Q8WVR3 580 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 PDLIM2Q96JY6 352 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 FAM13BQ9NYF5 915 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 FZD9O00144 591 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 SLC20A2Q08357 652 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 PRR5LQ6MZQ0 368 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 ZNF454Q8N9F8 522 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 STK32AQ8WU08 396 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 SNX21Q969T3 373 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 ALG2Q9H553 416 aa5.63□□□□□ -1.51
CNGA1-209ENST00000544810 ZNF277Q9NRM2 450 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms