RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 LRRC24Q50LG9 513 aa15.35■□□□□ 0.05
PCMTD1-208ENST00000544451 CNNM3Q8NE01 707 aa15.35■□□□□ 0.05
PCMTD1-208ENST00000544451 A0A1B0GUL7 405 aa15.35■□□□□ 0.05
PCMTD1-208ENST00000544451 GTF2F1P35269 517 aaKnown RBP eCLIP15.35■□□□□ 0.053e-8■■■□□ 18.7
PCMTD1-208ENST00000544451 SYKP43405 635 aa15.35■□□□□ 0.05
PCMTD1-208ENST00000544451 XPO4Q9C0E2 1151 aaKnown RBP15.35■□□□□ 0.05
PCMTD1-208ENST00000544451 CTNNA3Q9UI47 895 aa15.35■□□□□ 0.05
PCMTD1-208ENST00000544451 ADCY9O60503 1353 aa15.34■□□□□ 0.05
PCMTD1-208ENST00000544451 IFNL2Q8IZJ0 200 aa15.34■□□□□ 0.05
PCMTD1-208ENST00000544451 FAM89AQ96GI7 184 aa15.34■□□□□ 0.05
PCMTD1-208ENST00000544451 METTL22Q9BUU2 404 aaPredicted RBP15.34■□□□□ 0.05
PCMTD1-208ENST00000544451 UTP14AQ9BVJ6 771 aaKnown RBP15.34■□□□□ 0.05
PCMTD1-208ENST00000544451 PRDM11Q9NQV5 511 aa15.34■□□□□ 0.05
PCMTD1-208ENST00000544451 CWC25Q9NXE8 425 aaPredicted RBP15.34■□□□□ 0.05
PCMTD1-208ENST00000544451 E7EWF7 191 aa15.34■□□□□ 0.05
PCMTD1-208ENST00000544451 ERCC6LQ2NKX8 1250 aa15.34■□□□□ 0.05
PCMTD1-208ENST00000544451 SLC4A8Q2Y0W8 1093 aa15.34■□□□□ 0.05
PCMTD1-208ENST00000544451 PI16Q6UXB8 463 aa15.34■□□□□ 0.05
PCMTD1-208ENST00000544451 LRRC8AQ8IWT6 810 aa15.34■□□□□ 0.05
PCMTD1-208ENST00000544451 ZKSCAN3Q9BRR0 538 aa15.34■□□□□ 0.05
PCMTD1-208ENST00000544451 ALG1Q9BT22 464 aa15.33■□□□□ 0.05
PCMTD1-208ENST00000544451 SLC26A6Q9BXS9 759 aa15.33■□□□□ 0.05
PCMTD1-208ENST00000544451 DIP2CQ9Y2E4 1556 aa15.33■□□□□ 0.04
PCMTD1-208ENST00000544451 PDIA4P13667 645 aaKnown RBP15.33■□□□□ 0.04
PCMTD1-208ENST00000544451 NDUFA8P51970 172 aa15.33■□□□□ 0.04
PCMTD1-208ENST00000544451 ST3GAL1Q11201 340 aa15.33■□□□□ 0.04
PCMTD1-208ENST00000544451 ARHGAP29Q52LW3 1261 aa15.33■□□□□ 0.04
PCMTD1-208ENST00000544451 LDHAL6AQ6ZMR3 332 aa15.33■□□□□ 0.04
PCMTD1-208ENST00000544451 PUS3Q9BZE2 481 aaKnown RBP15.33■□□□□ 0.04
PCMTD1-208ENST00000544451 CLIC4Q9Y696 253 aa15.33■□□□□ 0.04
PCMTD1-208ENST00000544451 MYO5BQ9ULV0 1848 aa15.33■□□□□ 0.04
PCMTD1-208ENST00000544451 ERICH2A1L162 156 aa15.33■□□□□ 0.04
PCMTD1-208ENST00000544451 GNG11P61952 73 aa15.33■□□□□ 0.04
PCMTD1-208ENST00000544451 KBTBD3Q8NAB2 608 aa15.33■□□□□ 0.04
PCMTD1-208ENST00000544451 RNF216Q9NWF9 866 aaPredicted RBP15.33■□□□□ 0.04
PCMTD1-208ENST00000544451 TBC1D2BQ9UPU7 963 aa15.33■□□□□ 0.04
PCMTD1-208ENST00000544451 MINDY4BA8MYZ0 360 aa15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 SLU7O95391 586 aaKnown RBP15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 DPCR1Q3MIW9 517 aa15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 TTLL7Q6ZT98 887 aa15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 AIDAQ96BJ3 306 aa15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 METAP2P50579 478 aaKnown RBP eCLIP15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 KARSQ15046 597 aaKnown RBP15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 TMCO3Q6UWJ1 677 aa15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 AIFM3Q96NN9 605 aa15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 PODXL2Q9NZ53 605 aa15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 ABCF2Q9UG63 623 aa15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 PCDHA7Q9UN72 937 aa15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 AXIN2Q9Y2T1 843 aa15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 KDRP35968 1356 aa15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 USP32Q8NFA0 1604 aa15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 TDO2P48775 406 aa15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 SLC9C2Q5TAH2 1124 aa15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 KRT222Q8N1A0 295 aa15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 JMYQ8N9B5 988 aa15.32■□□□□ 0.04
PCMTD1-208ENST00000544451 HOXB7P09629 217 aa15.31■□□□□ 0.04
PCMTD1-208ENST00000544451 ATP5JP18859 108 aa15.31■□□□□ 0.04
PCMTD1-208ENST00000544451 NCBP1Q09161 790 aaKnown RBP15.31■□□□□ 0.04
PCMTD1-208ENST00000544451 IFIT5Q13325 482 aaKnown RBP15.31■□□□□ 0.04
PCMTD1-208ENST00000544451 SIRT1Q96EB6 747 aa15.31■□□□□ 0.04
PCMTD1-208ENST00000544451 CCDC34Q96HJ3 373 aa15.31■□□□□ 0.04
PCMTD1-208ENST00000544451 CEP170BQ9Y4F5 1589 aaPredicted RBP15.31■□□□□ 0.04
PCMTD1-208ENST00000544451 IFIT3O14879 490 aaKnown RBP15.31■□□□□ 0.04
PCMTD1-208ENST00000544451 GTF2E1P29083 439 aaPredicted RBP15.31■□□□□ 0.04
PCMTD1-208ENST00000544451 CMTR1Q8N1G2 835 aaKnown RBP15.31■□□□□ 0.04
PCMTD1-208ENST00000544451 GOLPH3LQ9H4A5 285 aa15.31■□□□□ 0.04
PCMTD1-208ENST00000544451 ADD1P35611 737 aaKnown RBP15.31■□□□□ 0.04
PCMTD1-208ENST00000544451 STX17P56962 302 aa15.31■□□□□ 0.04
PCMTD1-208ENST00000544451 NSUN7Q8NE18 718 aaKnown RBP15.31■□□□□ 0.04
PCMTD1-208ENST00000544451 PCMTD1Q96MG8 357 aaPredicted RBP15.31■□□□□ 0.04
PCMTD1-208ENST00000544451 GOLGA8AA7E2F4 631 aa15.3■□□□□ 0.04
PCMTD1-208ENST00000544451 RNF113AO15541 343 aaKnown RBP15.3■□□□□ 0.04
PCMTD1-208ENST00000544451 HSPD1P10809 573 aaKnown RBP15.3■□□□□ 0.04
PCMTD1-208ENST00000544451 RESTQ13127 1097 aa15.3■□□□□ 0.04
PCMTD1-208ENST00000544451 NCOA7Q8NI08 942 aa15.3■□□□□ 0.04
PCMTD1-208ENST00000544451 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.3■□□□□ 0.04
PCMTD1-208ENST00000544451 SIGLEC1Q9BZZ2 1709 aa15.3■□□□□ 0.04
PCMTD1-208ENST00000544451 ZNF202O95125 648 aa15.3■□□□□ 0.04
PCMTD1-208ENST00000544451 AFMP43652 599 aa15.3■□□□□ 0.04
PCMTD1-208ENST00000544451 GSDMDP57764 484 aa15.3■□□□□ 0.04
PCMTD1-208ENST00000544451 BABAM1Q9NWV8 329 aa15.3■□□□□ 0.04
PCMTD1-208ENST00000544451 IARSP41252 1262 aaKnown RBP15.3■□□□□ 0.04
PCMTD1-208ENST00000544451 PTPN12Q05209 780 aaKnown RBP15.3■□□□□ 0.04
PCMTD1-208ENST00000544451 KIF6Q6ZMV9 814 aa15.3■□□□□ 0.04
PCMTD1-208ENST00000544451 HOOK1Q9UJC3 728 aaKnown RBP15.3■□□□□ 0.04
PCMTD1-208ENST00000544451 B4E1Z4 1266 aa15.29■□□□□ 0.04
PCMTD1-208ENST00000544451 NEMFO60524 1076 aa15.29■□□□□ 0.04
PCMTD1-208ENST00000544451 TMEM67Q5HYA8 995 aa15.29■□□□□ 0.04
PCMTD1-208ENST00000544451 CLIC6Q96NY7 704 aa15.29■□□□□ 0.04
PCMTD1-208ENST00000544451 OGFRQ9NZT2 677 aa15.29■□□□□ 0.04
PCMTD1-208ENST00000544451 EPB41L2O43491 1005 aaKnown RBP15.29■□□□□ 0.04
PCMTD1-208ENST00000544451 TDRD7Q8NHU6 1098 aaKnown RBP15.29■□□□□ 0.04
PCMTD1-208ENST00000544451 ZNF827Q17R98 1081 aa15.29■□□□□ 0.04
PCMTD1-208ENST00000544451 TRMT44Q8IYL2 757 aaKnown RBP15.29■□□□□ 0.04
PCMTD1-208ENST00000544451 NAPBQ9H115 298 aa15.29■□□□□ 0.04
PCMTD1-208ENST00000544451 SLC52A2Q9HAB3 445 aa15.29■□□□□ 0.04
PCMTD1-208ENST00000544451 hCG_1642624A0A1W2PR95 340 aa15.28■□□□□ 0.04
PCMTD1-208ENST00000544451 PDIA3P30101 505 aaKnown RBP15.28■□□□□ 0.04
PCMTD1-208ENST00000544451 ADORA1P30542 326 aa15.28■□□□□ 0.04
PCMTD1-208ENST00000544451 STOX1Q6ZVD7 989 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms