RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 HMGB2P26583 209 aaKnown RBP19.2■□□□□ 0.66
SPDEF-202ENST00000544425 GTF2E1P29083 439 aaPredicted RBP19.2■□□□□ 0.66
SPDEF-202ENST00000544425 SLC27A3Q5K4L6 730 aa19.2■□□□□ 0.66
SPDEF-202ENST00000544425 TPTE2Q6XPS3 522 aa19.2■□□□□ 0.66
SPDEF-202ENST00000544425 BICDL1Q6ZP65 573 aa19.2■□□□□ 0.66
SPDEF-202ENST00000544425 CCDC129Q6ZRS4 1044 aa19.2■□□□□ 0.66
SPDEF-202ENST00000544425 LAMB2P55268 1798 aa19.19■□□□□ 0.66
SPDEF-202ENST00000544425 ZSCAN25Q6NSZ9 544 aa19.19■□□□□ 0.66
SPDEF-202ENST00000544425 HELBQ8NG08 1087 aaPredicted RBP19.19■□□□□ 0.66
SPDEF-202ENST00000544425 ZSCAN31Q96LW9 406 aaPredicted RBP19.19■□□□□ 0.66
SPDEF-202ENST00000544425 LRRC4BQ9NT99 713 aa19.19■□□□□ 0.66
SPDEF-202ENST00000544425 DDX11L8A8MPP1 907 aa19.18■□□□□ 0.66
SPDEF-202ENST00000544425 RFC4P35249 363 aa19.18■□□□□ 0.66
SPDEF-202ENST00000544425 AMIGO3Q86WK7 504 aa19.18■□□□□ 0.66
SPDEF-202ENST00000544425 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.18■□□□□ 0.66
SPDEF-202ENST00000544425 BSDC1Q9NW68 430 aaPredicted RBP19.18■□□□□ 0.66
SPDEF-202ENST00000544425 MAST3O60307 1309 aa19.18■□□□□ 0.66
SPDEF-202ENST00000544425 SBF2Q86WG5 1849 aa19.18■□□□□ 0.66
SPDEF-202ENST00000544425 PHKA1P46020 1223 aa19.18■□□□□ 0.66
SPDEF-202ENST00000544425 CHRNDQ07001 517 aa19.18■□□□□ 0.66
SPDEF-202ENST00000544425 NBPF5PQ86XG9 351 aaPredicted RBP19.18■□□□□ 0.66
SPDEF-202ENST00000544425 ANKRD18AQ8IVF6 992 aa19.18■□□□□ 0.66
SPDEF-202ENST00000544425 APPBP2Q92624 585 aa19.18■□□□□ 0.66
SPDEF-202ENST00000544425 OSBP2Q969R2 916 aa19.18■□□□□ 0.66
SPDEF-202ENST00000544425 NLRP3Q96P20 1036 aa19.18■□□□□ 0.66
SPDEF-202ENST00000544425 HSPD1P10809 573 aaKnown RBP19.17■□□□□ 0.66
SPDEF-202ENST00000544425 BLOC1S2Q6QNY1 142 aa19.17■□□□□ 0.66
SPDEF-202ENST00000544425 CPA1P15085 419 aa19.16■□□□□ 0.66
SPDEF-202ENST00000544425 PTMSP20962 102 aa19.16■□□□□ 0.66
SPDEF-202ENST00000544425 ANKRD1Q15327 319 aa19.16■□□□□ 0.66
SPDEF-202ENST00000544425 SLFNL1Q499Z3 407 aa19.16■□□□□ 0.66
SPDEF-202ENST00000544425 C3orf67Q6ZVT6 689 aa19.16■□□□□ 0.66
SPDEF-202ENST00000544425 NOL8Q76FK4 1167 aaKnown RBP19.16■□□□□ 0.66
SPDEF-202ENST00000544425 SH2B1Q9NRF2 756 aaPredicted RBP19.16■□□□□ 0.66
SPDEF-202ENST00000544425 CYP21A2P08686 494 aa19.16■□□□□ 0.66
SPDEF-202ENST00000544425 RPS6KB1P23443 525 aa19.16■□□□□ 0.66
SPDEF-202ENST00000544425 PI16Q6UXB8 463 aa19.16■□□□□ 0.66
SPDEF-202ENST00000544425 C4BP0C0L5 1744 aa19.15■□□□□ 0.66
SPDEF-202ENST00000544425 M0R2C6 588 aa19.15■□□□□ 0.66
SPDEF-202ENST00000544425 ZNF772Q68DY9 489 aaPredicted RBP19.15■□□□□ 0.66
SPDEF-202ENST00000544425 NEK1Q96PY6 1258 aa19.15■□□□□ 0.66
SPDEF-202ENST00000544425 ADD2P35612 726 aa19.14■□□□□ 0.65
SPDEF-202ENST00000544425 RBM6P78332 1123 aaKnown RBP19.14■□□□□ 0.65
SPDEF-202ENST00000544425 UBE4AQ14139 1066 aa19.14■□□□□ 0.65
SPDEF-202ENST00000544425 UBE3CQ15386 1083 aa19.14■□□□□ 0.65
SPDEF-202ENST00000544425 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.14■□□□□ 0.65
SPDEF-202ENST00000544425 TAF6LQ9Y6J9 622 aa19.14■□□□□ 0.65
SPDEF-202ENST00000544425 WASHC4Q2M389 1173 aa19.14■□□□□ 0.65
SPDEF-202ENST00000544425 SPATA5Q8NB90 893 aa19.14■□□□□ 0.65
SPDEF-202ENST00000544425 HMGB1P09429 215 aaKnown RBP19.13■□□□□ 0.65
SPDEF-202ENST00000544425 CTNNA3Q9UI47 895 aa19.13■□□□□ 0.65
SPDEF-202ENST00000544425 ZDHHC9Q9Y397 364 aa19.13■□□□□ 0.65
SPDEF-202ENST00000544425 TAF1LQ8IZX4 1826 aa19.13■□□□□ 0.65
SPDEF-202ENST00000544425 SNAP23O00161 211 aa19.12■□□□□ 0.65
SPDEF-202ENST00000544425 RPS8P62241 208 aaKnown RBP19.12■□□□□ 0.65
SPDEF-202ENST00000544425 PKP1Q13835 747 aa19.12■□□□□ 0.65
SPDEF-202ENST00000544425 GSE1Q14687 1217 aa19.12■□□□□ 0.65
SPDEF-202ENST00000544425 PIH1D3Q9NQM4 214 aaKnown RBP19.12■□□□□ 0.65
SPDEF-202ENST00000544425 MINPP1Q9UNW1 487 aa19.12■□□□□ 0.65
SPDEF-202ENST00000544425 COL24A1Q17RW2 1714 aa19.12■□□□□ 0.65
SPDEF-202ENST00000544425 PHF14O94880 888 aa19.11■□□□□ 0.65
SPDEF-202ENST00000544425 TRIM37O94972 964 aa19.11■□□□□ 0.65
SPDEF-202ENST00000544425 BAG4O95429 457 aaKnown RBP19.11■□□□□ 0.65
SPDEF-202ENST00000544425 BRD1O95696 1058 aa19.11■□□□□ 0.65
SPDEF-202ENST00000544425 SLC9C2Q5TAH2 1124 aa19.11■□□□□ 0.65
SPDEF-202ENST00000544425 PUS7LQ9H0K6 701 aaKnown RBP19.11■□□□□ 0.65
SPDEF-202ENST00000544425 CARMIL3Q8ND23 1372 aa19.11■□□□□ 0.65
SPDEF-202ENST00000544425 ARAP2Q8WZ64 1704 aa19.11■□□□□ 0.65
SPDEF-202ENST00000544425 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.11■□□□□ 0.65
SPDEF-202ENST00000544425 RASGRF1Q13972 1273 aa19.11■□□□□ 0.65
SPDEF-202ENST00000544425 NFIXQ14938 502 aa19.11■□□□□ 0.65
SPDEF-202ENST00000544425 CELF1Q92879 486 aaKnown RBP19.11■□□□□ 0.65
SPDEF-202ENST00000544425 TM4SF1P30408 202 aa19.1■□□□□ 0.65
SPDEF-202ENST00000544425 BCAMP50895 628 aa19.1■□□□□ 0.65
SPDEF-202ENST00000544425 GOLGA6L22H0YM25 854 aa19.09■□□□□ 0.65
SPDEF-202ENST00000544425 TRAK2O60296 914 aa19.09■□□□□ 0.65
SPDEF-202ENST00000544425 ME3Q16798 604 aa19.09■□□□□ 0.65
SPDEF-202ENST00000544425 TPCN1Q9ULQ1 816 aa19.09■□□□□ 0.65
SPDEF-202ENST00000544425 ZNF804BA4D1E1 1349 aa19.09■□□□□ 0.65
SPDEF-202ENST00000544425 TCRBV5S4A2TA0A5A2 114 aa19.09■□□□□ 0.65
SPDEF-202ENST00000544425 FOXP2O15409 715 aa19.09■□□□□ 0.65
SPDEF-202ENST00000544425 GPAA1O43292 621 aa19.09■□□□□ 0.65
SPDEF-202ENST00000544425 IDH1O75874 414 aaKnown RBP19.09■□□□□ 0.65
SPDEF-202ENST00000544425 MAP3K12Q12852 859 aa19.09■□□□□ 0.65
SPDEF-202ENST00000544425 COL9A3Q14050 684 aaPredicted RBP19.09■□□□□ 0.65
SPDEF-202ENST00000544425 TOB2Q14106 344 aaPredicted RBP19.09■□□□□ 0.65
SPDEF-202ENST00000544425 LARP6Q9BRS8 491 aaKnown RBP19.09■□□□□ 0.65
SPDEF-202ENST00000544425 AKAP11Q9UKA4 1901 aa19.08■□□□□ 0.65
SPDEF-202ENST00000544425 LARGE1O95461 756 aa19.08■□□□□ 0.65
SPDEF-202ENST00000544425 PDE6AP16499 860 aa19.08■□□□□ 0.65
SPDEF-202ENST00000544425 SKOR2Q2VWA4 1001 aaPredicted RBP19.08■□□□□ 0.65
SPDEF-202ENST00000544425 DHX32Q7L7V1 743 aaKnown RBP19.08■□□□□ 0.65
SPDEF-202ENST00000544425 ANKRD2Q9GZV1 360 aa19.08■□□□□ 0.65
SPDEF-202ENST00000544425 GNL3LQ9NVN8 582 aaKnown RBP19.08■□□□□ 0.65
SPDEF-202ENST00000544425 FGAP02671 866 aa19.07■□□□□ 0.64
SPDEF-202ENST00000544425 GYS1P13807 737 aa19.07■□□□□ 0.64
SPDEF-202ENST00000544425 STOX1Q6ZVD7 989 aa19.07■□□□□ 0.64
SPDEF-202ENST00000544425 ZNF532Q9HCE3 1301 aa19.07■□□□□ 0.64
SPDEF-202ENST00000544425 SMC3Q9UQE7 1217 aa19.07■□□□□ 0.64
SPDEF-202ENST00000544425 E7EWF7 191 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms