RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 CWC25Q9NXE8 425 aaPredicted RBP12.41□□□□□ -0.42
MDH1-216ENST00000544381 MAP3K15Q6ZN16 1313 aa12.41□□□□□ -0.42
MDH1-216ENST00000544381 A0A087WZG4 1122 aa12.4□□□□□ -0.42
MDH1-216ENST00000544381 TCIRG1Q13488 830 aa12.4□□□□□ -0.42
MDH1-216ENST00000544381 PROX2Q3B8N5 592 aa12.4□□□□□ -0.42
MDH1-216ENST00000544381 RC3H1Q5TC82 1133 aaKnown RBP12.4□□□□□ -0.42
MDH1-216ENST00000544381 C9orf131Q5VYM1 1079 aa12.4□□□□□ -0.42
MDH1-216ENST00000544381 ARHGAP27Q6ZUM4 889 aa12.4□□□□□ -0.42
MDH1-216ENST00000544381 CCDC191Q8NCU4 936 aa12.4□□□□□ -0.42
MDH1-216ENST00000544381 KCTD12Q96CX2 325 aaKnown RBP12.4□□□□□ -0.42
MDH1-216ENST00000544381 SUCLG2Q96I99 432 aa12.4□□□□□ -0.42
MDH1-216ENST00000544381 BACH2Q9BYV9 841 aa12.4□□□□□ -0.42
MDH1-216ENST00000544381 RTCBQ9Y3I0 505 aaKnown RBP12.4□□□□□ -0.42
MDH1-216ENST00000544381 RBM19Q9Y4C8 960 aaKnown RBP12.4□□□□□ -0.42
MDH1-216ENST00000544381 CCDC88AQ3V6T2 1871 aa12.4□□□□□ -0.42
MDH1-216ENST00000544381 TIAM2Q8IVF5 1701 aa12.4□□□□□ -0.42
MDH1-216ENST00000544381 RPS6KA4O75676 772 aa12.39□□□□□ -0.43
MDH1-216ENST00000544381 PRELPP51888 382 aa12.39□□□□□ -0.43
MDH1-216ENST00000544381 MTX1Q13505 466 aa12.39□□□□□ -0.43
MDH1-216ENST00000544381 HSP90AB4PQ58FF6 505 aa12.39□□□□□ -0.43
MDH1-216ENST00000544381 HSP90AB3PQ58FF7 597 aa12.39□□□□□ -0.43
MDH1-216ENST00000544381 TRAPPC3LQ5T215 181 aa12.39□□□□□ -0.43
MDH1-216ENST00000544381 INTS5Q6P9B9 1019 aaKnown RBP12.39□□□□□ -0.43
MDH1-216ENST00000544381 UBE3BQ7Z3V4 1068 aa12.39□□□□□ -0.43
MDH1-216ENST00000544381 DZIP3Q86Y13 1208 aaKnown RBP12.39□□□□□ -0.43
MDH1-216ENST00000544381 NLGN1Q8N2Q7 840 aa12.39□□□□□ -0.43
MDH1-216ENST00000544381 KCNV2Q8TDN2 545 aa12.39□□□□□ -0.43
MDH1-216ENST00000544381 KLRG1Q96E93 195 aa12.39□□□□□ -0.43
MDH1-216ENST00000544381 NBPF3Q9H094 633 aa12.39□□□□□ -0.43
MDH1-216ENST00000544381 BCL11AQ9H165 835 aa12.39□□□□□ -0.43
MDH1-216ENST00000544381 HCSTQ9UBK5 93 aa12.39□□□□□ -0.43
MDH1-216ENST00000544381 SRP68Q9UHB9 627 aaKnown RBP12.39□□□□□ -0.43
MDH1-216ENST00000544381 EXOC6BQ9Y2D4 811 aa12.39□□□□□ -0.43
MDH1-216ENST00000544381 ERVV-1B6SEH8 477 aa12.38□□□□□ -0.43
MDH1-216ENST00000544381 RAB11FIP3O75154 756 aa12.38□□□□□ -0.43
MDH1-216ENST00000544381 SURF6O75683 361 aaKnown RBP12.38□□□□□ -0.43
MDH1-216ENST00000544381 EIF5P55010 431 aaKnown RBP12.38□□□□□ -0.43
MDH1-216ENST00000544381 GIGYF2Q6Y7W6 1299 aaKnown RBP12.38□□□□□ -0.43
MDH1-216ENST00000544381 ISCA1Q9BUE6 129 aa12.38□□□□□ -0.43
MDH1-216ENST00000544381 LRRCC1Q9C099 1032 aa12.38□□□□□ -0.43
MDH1-216ENST00000544381 BICC1Q9H694 974 aaKnown RBP12.38□□□□□ -0.43
MDH1-216ENST00000544381 GOLGA8CPA6NN73 597 aa12.37□□□□□ -0.43
MDH1-216ENST00000544381 H7C1W4 665 aa12.37□□□□□ -0.43
MDH1-216ENST00000544381 SMARCA5O60264 1052 aaPredicted RBP12.37□□□□□ -0.43
MDH1-216ENST00000544381 TRIM28Q13263 835 aaKnown RBP12.37□□□□□ -0.43
MDH1-216ENST00000544381 JARID2Q92833 1246 aaPredicted RBP12.37□□□□□ -0.43
MDH1-216ENST00000544381 RABGEF1Q9UJ41 708 aa12.37□□□□□ -0.43
MDH1-216ENST00000544381 TBC1D2BQ9UPU7 963 aa12.37□□□□□ -0.43
MDH1-216ENST00000544381 USP42Q9H9J4 1324 aaKnown RBP12.37□□□□□ -0.43
MDH1-216ENST00000544381 COL15A1P39059 1388 aa12.37□□□□□ -0.43
MDH1-216ENST00000544381 CHRNA5P30532 468 aa12.37□□□□□ -0.43
MDH1-216ENST00000544381 OS9Q13438 667 aaPredicted RBP12.37□□□□□ -0.43
MDH1-216ENST00000544381 TSR1Q2NL82 804 aaKnown RBP12.37□□□□□ -0.43
MDH1-216ENST00000544381 KAZALD1Q96I82 304 aa12.37□□□□□ -0.43
MDH1-216ENST00000544381 ANKRD31Q8N7Z5 1873 aa12.36□□□□□ -0.43
MDH1-216ENST00000544381 CASP7P55210 303 aa12.36□□□□□ -0.43
MDH1-216ENST00000544381 FSTL1Q12841 308 aa12.36□□□□□ -0.43
MDH1-216ENST00000544381 HLFQ16534 295 aa12.36□□□□□ -0.43
MDH1-216ENST00000544381 C8orf34Q49A92 452 aa12.36□□□□□ -0.43
MDH1-216ENST00000544381 KIF1BPQ96EK5 621 aa12.36□□□□□ -0.43
MDH1-216ENST00000544381 NOP58Q9Y2X3 529 aaKnown RBP12.36□□□□□ -0.43
MDH1-216ENST00000544381 NUP98P52948 1817 aa12.35□□□□□ -0.43
MDH1-216ENST00000544381 COL11A2P13942 1736 aaPredicted RBP12.35□□□□□ -0.43
MDH1-216ENST00000544381 POLRMTO00411 1230 aaKnown RBP12.35□□□□□ -0.43
MDH1-216ENST00000544381 GPTP24298 496 aa12.35□□□□□ -0.43
MDH1-216ENST00000544381 RFC4P35249 363 aa12.35□□□□□ -0.43
MDH1-216ENST00000544381 G3BP1Q13283 466 aaKnown RBP eCLIP12.35□□□□□ -0.437e-7■■□□□ 13
MDH1-216ENST00000544381 RTL5Q5HYW3 569 aaPredicted RBP12.35□□□□□ -0.43
MDH1-216ENST00000544381 EPHA10Q5JZY3 1008 aa12.35□□□□□ -0.43
MDH1-216ENST00000544381 ERC1Q8IUD2 1116 aa12.35□□□□□ -0.43
MDH1-216ENST00000544381 PLEKHM2Q8IWE5 1019 aa12.35□□□□□ -0.43
MDH1-216ENST00000544381 C16orf71Q8IYS4 520 aaPredicted RBP12.35□□□□□ -0.43
MDH1-216ENST00000544381 RNF181Q9P0P0 153 aa12.35□□□□□ -0.43
MDH1-216ENST00000544381 PARP3Q9Y6F1 533 aa12.35□□□□□ -0.43
MDH1-216ENST00000544381 ANKRD36CQ5JPF3 1778 aa12.34□□□□□ -0.43
MDH1-216ENST00000544381 PCCAP05165 728 aaPredicted RBP12.34□□□□□ -0.43
MDH1-216ENST00000544381 OSBPP22059 807 aa12.34□□□□□ -0.43
MDH1-216ENST00000544381 TM4SF1P30408 202 aa12.34□□□□□ -0.43
MDH1-216ENST00000544381 RASSF7Q02833 373 aa12.34□□□□□ -0.43
MDH1-216ENST00000544381 RABL6Q3YEC7 729 aaPredicted RBP12.34□□□□□ -0.43
MDH1-216ENST00000544381 ZBTB38Q8NAP3 1195 aaPredicted RBP12.34□□□□□ -0.43
MDH1-216ENST00000544381 RHPN1Q8TCX5 695 aa12.34□□□□□ -0.43
MDH1-216ENST00000544381 RRAGCQ9HB90 399 aa12.34□□□□□ -0.43
MDH1-216ENST00000544381 PIM2Q9P1W9 311 aa12.34□□□□□ -0.43
MDH1-216ENST00000544381 KIAA1468Q9P260 1216 aa12.34□□□□□ -0.43
MDH1-216ENST00000544381 ZNF652Q9Y2D9 606 aa12.34□□□□□ -0.43
MDH1-216ENST00000544381 CHMP3Q9Y3E7 222 aa12.34□□□□□ -0.43
MDH1-216ENST00000544381 DICER1Q9UPY3 1922 aaKnown RBP12.33□□□□□ -0.44
MDH1-216ENST00000544381 CAMTA2O94983 1202 aa12.33□□□□□ -0.44
MDH1-216ENST00000544381 DALRD3Q5D0E6 543 aaKnown RBP12.33□□□□□ -0.44
MDH1-216ENST00000544381 BMP2KLQ5H9B9 411 aa12.33□□□□□ -0.44
MDH1-216ENST00000544381 LMBR1LQ6UX01 489 aa12.33□□□□□ -0.44
MDH1-216ENST00000544381 NLRP10Q86W26 655 aa12.33□□□□□ -0.44
MDH1-216ENST00000544381 ZNF34Q8IZ26 560 aa12.33□□□□□ -0.44
MDH1-216ENST00000544381 PA2G4Q9UQ80 394 aaKnown RBP12.33□□□□□ -0.44
MDH1-216ENST00000544381 CARMIL3Q8ND23 1372 aa12.32□□□□□ -0.44
MDH1-216ENST00000544381 FER1L6Q2WGJ9 1857 aa12.32□□□□□ -0.44
MDH1-216ENST00000544381 TRIM6-TRIM34B2RNG4 842 aa12.32□□□□□ -0.44
MDH1-216ENST00000544381 FOXO4P98177 505 aa12.32□□□□□ -0.44
MDH1-216ENST00000544381 OTUD7AQ8TE49 926 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms