RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 SETD1AO15047 1707 aaKnown RBP11.95□□□□□ -0.5
TCF4-209ENST00000544241 CCDC196A0A1B0GTZ2 297 aa11.94□□□□□ -0.5
TCF4-209ENST00000544241 USP5P45974 858 aa11.94□□□□□ -0.5
TCF4-209ENST00000544241 ME1P48163 572 aa11.94□□□□□ -0.5
TCF4-209ENST00000544241 GNG11P61952 73 aa11.94□□□□□ -0.5
TCF4-209ENST00000544241 FSIP1Q8NA03 581 aa11.94□□□□□ -0.5
TCF4-209ENST00000544241 USP44Q9H0E7 712 aa11.94□□□□□ -0.5
TCF4-209ENST00000544241 SNRKQ9NRH2 765 aa11.94□□□□□ -0.5
TCF4-209ENST00000544241 TOMM22Q9NS69 142 aa11.94□□□□□ -0.5
TCF4-209ENST00000544241 DLC1Q96QB1 1528 aa11.94□□□□□ -0.5
TCF4-209ENST00000544241 A0A1W2PQ27 194 aa11.94□□□□□ -0.5
TCF4-209ENST00000544241 A0A1W2PQ64 194 aa11.94□□□□□ -0.5
TCF4-209ENST00000544241 A0A1W2PQD8 194 aa11.94□□□□□ -0.5
TCF4-209ENST00000544241 GSCP56915 257 aaPredicted RBP11.94□□□□□ -0.5
TCF4-209ENST00000544241 OS9Q13438 667 aaPredicted RBP11.94□□□□□ -0.5
TCF4-209ENST00000544241 DNAAF4Q8WXU2 420 aa11.94□□□□□ -0.5
TCF4-209ENST00000544241 SLC52A1Q9NWF4 448 aa11.94□□□□□ -0.5
TCF4-209ENST00000544241 PPFIA4O75335 1185 aa11.93□□□□□ -0.5
TCF4-209ENST00000544241 ATP6V1AP38606 617 aa11.93□□□□□ -0.5
TCF4-209ENST00000544241 NUTM2DQ5VT03 806 aaPredicted RBP11.93□□□□□ -0.5
TCF4-209ENST00000544241 TADA2BQ86TJ2 420 aa11.93□□□□□ -0.5
TCF4-209ENST00000544241 ANKRD20A12PQ8NF67 263 aa11.93□□□□□ -0.5
TCF4-209ENST00000544241 SYTL4Q96C24 671 aaPredicted RBP11.93□□□□□ -0.5
TCF4-209ENST00000544241 PDE11AQ9HCR9 933 aa11.93□□□□□ -0.5
TCF4-209ENST00000544241 PPP2R2CQ9Y2T4 447 aa11.93□□□□□ -0.5
TCF4-209ENST00000544241 RICTORQ6R327 1708 aa11.93□□□□□ -0.5
TCF4-209ENST00000544241 H3BQF6 201 aa11.93□□□□□ -0.5
TCF4-209ENST00000544241 TOP1P11387 765 aaKnown RBP11.93□□□□□ -0.5
TCF4-209ENST00000544241 FANCCQ00597 558 aa11.93□□□□□ -0.5
TCF4-209ENST00000544241 SETQ01105 290 aaPredicted RBP11.93□□□□□ -0.5
TCF4-209ENST00000544241 MCM6Q14566 821 aa11.93□□□□□ -0.5
TCF4-209ENST00000544241 ADALQ6DHV7 355 aa11.93□□□□□ -0.5
TCF4-209ENST00000544241 DONSONQ9NYP3 566 aa11.93□□□□□ -0.5
TCF4-209ENST00000544241 KIDINS220Q9ULH0 1771 aa11.92□□□□□ -0.5
TCF4-209ENST00000544241 STX10O60499 249 aa11.92□□□□□ -0.5
TCF4-209ENST00000544241 SERPINC1P01008 464 aa11.92□□□□□ -0.5
TCF4-209ENST00000544241 IFIT2P09913 472 aaKnown RBP11.92□□□□□ -0.5
TCF4-209ENST00000544241 MAP2K2P36507 400 aa11.92□□□□□ -0.5
TCF4-209ENST00000544241 UBASH3AP57075 661 aa11.92□□□□□ -0.5
TCF4-209ENST00000544241 NLRP12P59046 1061 aa11.92□□□□□ -0.5
TCF4-209ENST00000544241 CHMP4BP1P59074 171 aa11.92□□□□□ -0.5
TCF4-209ENST00000544241 TOB2Q14106 344 aaPredicted RBP11.92□□□□□ -0.5
TCF4-209ENST00000544241 GOLPH3LQ9H4A5 285 aa11.92□□□□□ -0.5
TCF4-209ENST00000544241 CXorf56Q9H5V9 222 aa11.92□□□□□ -0.5
TCF4-209ENST00000544241 RAB21Q9UL25 225 aa11.92□□□□□ -0.5
TCF4-209ENST00000544241 N4BP2Q86UW6 1770 aaPredicted RBP11.92□□□□□ -0.5
TCF4-209ENST00000544241 NRKQ7Z2Y5 1582 aa11.92□□□□□ -0.5
TCF4-209ENST00000544241 VWA3AA6NCI4 1184 aa11.91□□□□□ -0.5
TCF4-209ENST00000544241 SLC3A2P08195 630 aaKnown RBP11.91□□□□□ -0.5
TCF4-209ENST00000544241 CEBPZQ03701 1054 aaKnown RBP11.91□□□□□ -0.5
TCF4-209ENST00000544241 STK3Q13188 491 aa11.91□□□□□ -0.5
TCF4-209ENST00000544241 BEND6Q5SZJ8 279 aaPredicted RBP11.91□□□□□ -0.5
TCF4-209ENST00000544241 SRGAP1Q7Z6B7 1085 aa11.91□□□□□ -0.5
TCF4-209ENST00000544241 FMR1NBQ8N0W7 255 aaPredicted RBP11.91□□□□□ -0.5
TCF4-209ENST00000544241 BANK1Q8NDB2 785 aa11.91□□□□□ -0.5
TCF4-209ENST00000544241 XRN1Q8IZH2 1706 aaKnown RBP11.91□□□□□ -0.5
TCF4-209ENST00000544241 MLH3Q9UHC1 1453 aa11.91□□□□□ -0.5
TCF4-209ENST00000544241 HSP90B1P14625 803 aaKnown RBP11.91□□□□□ -0.5
TCF4-209ENST00000544241 ADD1P35611 737 aaKnown RBP11.91□□□□□ -0.5
TCF4-209ENST00000544241 TRDNQ13061 729 aa11.91□□□□□ -0.5
TCF4-209ENST00000544241 GGT6Q6P531 493 aa11.91□□□□□ -0.5
TCF4-209ENST00000544241 CTCFLQ8NI51 663 aaPredicted RBP11.91□□□□□ -0.5
TCF4-209ENST00000544241 KCNG4Q8TDN1 519 aa11.91□□□□□ -0.5
TCF4-209ENST00000544241 CACNA1FO60840 1977 aa11.91□□□□□ -0.5
TCF4-209ENST00000544241 RRS1Q15050 365 aaKnown RBP11.9□□□□□ -0.5
TCF4-209ENST00000544241 DPCR1Q3MIW9 517 aa11.9□□□□□ -0.5
TCF4-209ENST00000544241 CFAP100Q494V2 611 aa11.9□□□□□ -0.5
TCF4-209ENST00000544241 NME9Q86XW9 330 aa11.9□□□□□ -0.5
TCF4-209ENST00000544241 BAG1Q99933 345 aaPredicted RBP11.9□□□□□ -0.5
TCF4-209ENST00000544241 HMGB1P09429 215 aaKnown RBP11.9□□□□□ -0.5
TCF4-209ENST00000544241 MCM3P25205 808 aa11.9□□□□□ -0.5
TCF4-209ENST00000544241 EIF4A2Q14240 407 aaKnown RBP11.9□□□□□ -0.5
TCF4-209ENST00000544241 SF3A1Q15459 793 aaKnown RBP11.9□□□□□ -0.5
TCF4-209ENST00000544241 MSANTD4Q8NCY6 345 aa11.9□□□□□ -0.5
TCF4-209ENST00000544241 SMARCC2Q8TAQ2 1214 aa11.9□□□□□ -0.5
TCF4-209ENST00000544241 CCDC102AQ96A19 550 aa11.9□□□□□ -0.5
TCF4-209ENST00000544241 BABAM1Q9NWV8 329 aa11.9□□□□□ -0.5
TCF4-209ENST00000544241 L1RE1Q9UN81 338 aa11.9□□□□□ -0.5
TCF4-209ENST00000544241 NUTM2FA1L443 756 aa11.89□□□□□ -0.51
TCF4-209ENST00000544241 ERLIN2O94905 339 aa11.89□□□□□ -0.51
TCF4-209ENST00000544241 NUTM2GQ5VZR2 741 aa11.89□□□□□ -0.51
TCF4-209ENST00000544241 VSTM4Q8IW00 320 aa11.89□□□□□ -0.51
TCF4-209ENST00000544241 FAM177A1Q8N128 213 aaPredicted RBP11.89□□□□□ -0.51
TCF4-209ENST00000544241 CCDC12Q8WUD4 166 aaPredicted RBP11.89□□□□□ -0.51
TCF4-209ENST00000544241 VIPAS39Q9H9C1 493 aa11.89□□□□□ -0.51
TCF4-209ENST00000544241 FAN1Q9Y2M0 1017 aa11.89□□□□□ -0.51
TCF4-209ENST00000544241 JAK2O60674 1132 aa11.89□□□□□ -0.51
TCF4-209ENST00000544241 DTNBO60941 627 aa11.89□□□□□ -0.51
TCF4-209ENST00000544241 MYL5Q02045 173 aa11.89□□□□□ -0.51
TCF4-209ENST00000544241 LRRC31Q6UY01 552 aa11.89□□□□□ -0.51
TCF4-209ENST00000544241 POTEDQ86YR6 584 aa11.89□□□□□ -0.51
TCF4-209ENST00000544241 CNNM3Q8NE01 707 aa11.89□□□□□ -0.51
TCF4-209ENST00000544241 FMNL2Q96PY5 1086 aa11.89□□□□□ -0.51
TCF4-209ENST00000544241 NEK1Q96PY6 1258 aa11.89□□□□□ -0.51
TCF4-209ENST00000544241 USP28Q96RU2 1077 aa11.89□□□□□ -0.51
TCF4-209ENST00000544241 EPC1Q9H2F5 836 aa11.89□□□□□ -0.51
TCF4-209ENST00000544241 LMOD1P29536 600 aaPredicted RBP11.88□□□□□ -0.51
TCF4-209ENST00000544241 PIP4K2BP78356 416 aa11.88□□□□□ -0.51
TCF4-209ENST00000544241 NCAPHQ15003 741 aa11.88□□□□□ -0.51
TCF4-209ENST00000544241 MICALL1Q8N3F8 863 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms