RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 ZNF646O15015 1829 aaPredicted RBP23.98■■□□□ 1.43
SPPL3-208ENST00000543854 UBTFL1P0CB47 393 aaPredicted RBP23.98■■□□□ 1.43
SPPL3-208ENST00000543854 AGBL3Q8NEM8 1001 aa23.98■■□□□ 1.43
SPPL3-208ENST00000543854 ZC3H15Q8WU90 426 aaKnown RBP23.98■■□□□ 1.43
SPPL3-208ENST00000543854 TMEM88BA6NKF7 163 aa23.97■■□□□ 1.43
SPPL3-208ENST00000543854 IPO8O15397 1037 aaKnown RBP23.97■■□□□ 1.43
SPPL3-208ENST00000543854 TBC1D10BQ4KMP7 808 aaPredicted RBP23.97■■□□□ 1.43
SPPL3-208ENST00000543854 SAMD7Q7Z3H4 446 aa23.97■■□□□ 1.43
SPPL3-208ENST00000543854 FBXW7Q969H0 707 aa23.97■■□□□ 1.43
SPPL3-208ENST00000543854 PLIN1O60240 522 aa23.96■■□□□ 1.43
SPPL3-208ENST00000543854 HIRAP54198 1017 aaPredicted RBP23.96■■□□□ 1.43
SPPL3-208ENST00000543854 MROH5Q6ZUA9 1318 aa23.95■■□□□ 1.42
SPPL3-208ENST00000543854 MYO3BQ8WXR4 1341 aa23.95■■□□□ 1.42
SPPL3-208ENST00000543854 SNAP23O00161 211 aa23.95■■□□□ 1.42
SPPL3-208ENST00000543854 KIF4BQ2VIQ3 1234 aa23.95■■□□□ 1.42
SPPL3-208ENST00000543854 STRIP1Q5VSL9 837 aa23.95■■□□□ 1.42
SPPL3-208ENST00000543854 C15orf52Q6ZUT6 534 aaKnown RBP23.95■■□□□ 1.42
SPPL3-208ENST00000543854 FRAT1Q92837 279 aaPredicted RBP23.95■■□□□ 1.42
SPPL3-208ENST00000543854 PGAP2Q9UHJ9 254 aa23.95■■□□□ 1.42
SPPL3-208ENST00000543854 TRPM7Q96QT4 1865 aa23.95■■□□□ 1.42
SPPL3-208ENST00000543854 IRS2Q9Y4H2 1338 aa23.94■■□□□ 1.42
SPPL3-208ENST00000543854 BCAR3O75815 825 aa23.94■■□□□ 1.42
SPPL3-208ENST00000543854 ZNF804AQ7Z570 1209 aa23.94■■□□□ 1.42
SPPL3-208ENST00000543854 HDAC5Q9UQL6 1122 aa23.94■■□□□ 1.42
SPPL3-208ENST00000543854 TRAF5O00463 557 aa23.93■■□□□ 1.42
SPPL3-208ENST00000543854 EGFRP00533 1210 aa23.93■■□□□ 1.42
SPPL3-208ENST00000543854 USP17L8P0C7I0 530 aa23.93■■□□□ 1.42
SPPL3-208ENST00000543854 TRIM27P14373 513 aa23.93■■□□□ 1.42
SPPL3-208ENST00000543854 ZNF280AP59817 542 aaPredicted RBP23.93■■□□□ 1.42
SPPL3-208ENST00000543854 DACT2Q5SW24 774 aa23.93■■□□□ 1.42
SPPL3-208ENST00000543854 RBM26Q5T8P6 1007 aaKnown RBP23.93■■□□□ 1.42
SPPL3-208ENST00000543854 INTS3Q68E01 1043 aaKnown RBP23.93■■□□□ 1.42
SPPL3-208ENST00000543854 ATF7IPQ6VMQ6 1270 aa23.93■■□□□ 1.42
SPPL3-208ENST00000543854 PUS3Q9BZE2 481 aaKnown RBP23.93■■□□□ 1.42
SPPL3-208ENST00000543854 GMLQ99445 158 aa23.92■■□□□ 1.42
SPPL3-208ENST00000543854 GLIS2Q9BZE0 524 aaPredicted RBP23.92■■□□□ 1.42
SPPL3-208ENST00000543854 CD209Q9NNX6 404 aa23.92■■□□□ 1.42
SPPL3-208ENST00000543854 RIPOR2Q9Y4F9 1068 aa23.92■■□□□ 1.42
SPPL3-208ENST00000543854 PCNTO95613 3336 aa23.91■■□□□ 1.42
SPPL3-208ENST00000543854 METTL24Q5JXM2 366 aa23.91■■□□□ 1.42
SPPL3-208ENST00000543854 JMYQ8N9B5 988 aa23.91■■□□□ 1.42
SPPL3-208ENST00000543854 MEIS3Q99687 375 aa23.91■■□□□ 1.42
SPPL3-208ENST00000543854 MKRN1Q9UHC7 482 aaKnown RBP23.91■■□□□ 1.42
SPPL3-208ENST00000543854 CNTNAP1P78357 1384 aa23.91■■□□□ 1.42
SPPL3-208ENST00000543854 UBE4AQ14139 1066 aa23.9■■□□□ 1.42
SPPL3-208ENST00000543854 LRRC24Q50LG9 513 aa23.9■■□□□ 1.42
SPPL3-208ENST00000543854 TTLL5Q6EMB2 1281 aa23.9■■□□□ 1.42
SPPL3-208ENST00000543854 CDC37L1Q7L3B6 337 aa23.9■■□□□ 1.42
SPPL3-208ENST00000543854 KLHDC4Q8TBB5 520 aa23.9■■□□□ 1.42
SPPL3-208ENST00000543854 LRRFIP2Q9Y608 721 aaKnown RBP23.9■■□□□ 1.42
SPPL3-208ENST00000543854 GTF2IP78347 998 aa23.89■■□□□ 1.41
SPPL3-208ENST00000543854 FMR1Q06787 632 aaKnown RBP eCLIP23.89■■□□□ 1.41
SPPL3-208ENST00000543854 OGFOD1Q8N543 542 aa23.89■■□□□ 1.41
SPPL3-208ENST00000543854 MXD3Q9BW11 206 aa23.89■■□□□ 1.41
SPPL3-208ENST00000543854 MYOZ2Q9NPC6 264 aa23.89■■□□□ 1.41
SPPL3-208ENST00000543854 ABT1Q9ULW3 272 aaKnown RBP23.89■■□□□ 1.41
SPPL3-208ENST00000543854 GNAI3P08754 354 aa23.88■■□□□ 1.41
SPPL3-208ENST00000543854 ZKSCAN2Q63HK3 967 aa23.88■■□□□ 1.41
SPPL3-208ENST00000543854 DCPSQ96C86 337 aaKnown RBP23.88■■□□□ 1.41
SPPL3-208ENST00000543854 GGA3Q9NZ52 723 aa23.88■■□□□ 1.41
SPPL3-208ENST00000543854 IL1R1P14778 569 aa23.87■■□□□ 1.41
SPPL3-208ENST00000543854 RFX5P48382 616 aaPredicted RBP23.87■■□□□ 1.41
SPPL3-208ENST00000543854 KRT26Q7Z3Y9 468 aa23.87■■□□□ 1.41
SPPL3-208ENST00000543854 CLUAP1Q96AJ1 413 aa23.87■■□□□ 1.41
SPPL3-208ENST00000543854 TNNQ9UQP3 1299 aa23.86■■□□□ 1.41
SPPL3-208ENST00000543854 RASSF10A6NK89 507 aa23.85■■□□□ 1.41
SPPL3-208ENST00000543854 EYA2O00167 538 aa23.85■■□□□ 1.41
SPPL3-208ENST00000543854 PDE8BO95263 885 aa23.85■■□□□ 1.41
SPPL3-208ENST00000543854 CELF2O95319 508 aaKnown RBP23.85■■□□□ 1.41
SPPL3-208ENST00000543854 MMP14P50281 582 aa23.85■■□□□ 1.41
SPPL3-208ENST00000543854 PTPN12Q05209 780 aaKnown RBP23.85■■□□□ 1.41
SPPL3-208ENST00000543854 USP48Q86UV5 1035 aa23.85■■□□□ 1.41
SPPL3-208ENST00000543854 KIAA0825Q8IV33 1275 aa23.85■■□□□ 1.41
SPPL3-208ENST00000543854 SULF1Q8IWU6 871 aa23.85■■□□□ 1.41
SPPL3-208ENST00000543854 VGLL2Q8N8G2 317 aa23.85■■□□□ 1.41
SPPL3-208ENST00000543854 ZNF408Q9H9D4 720 aa23.85■■□□□ 1.41
SPPL3-208ENST00000543854 GYG1P46976 350 aa23.84■■□□□ 1.41
SPPL3-208ENST00000543854 SCARF1Q14162 830 aa23.84■■□□□ 1.41
SPPL3-208ENST00000543854 CST9Q5W186 159 aa23.84■■□□□ 1.41
SPPL3-208ENST00000543854 FTSJ3Q8IY81 847 aaKnown RBP23.84■■□□□ 1.41
SPPL3-208ENST00000543854 HDAC9Q9UKV0 1011 aa23.84■■□□□ 1.41
SPPL3-208ENST00000543854 ARAP2Q8WZ64 1704 aa23.84■■□□□ 1.41
SPPL3-208ENST00000543854 ASTN2O75129 1339 aaPredicted RBP23.84■■□□□ 1.41
SPPL3-208ENST00000543854 ADM5C9JUS6 153 aa23.83■■□□□ 1.41
SPPL3-208ENST00000543854 HIBADHP31937 336 aaKnown RBP23.83■■□□□ 1.41
SPPL3-208ENST00000543854 PUM3Q15397 648 aaKnown RBP23.83■■□□□ 1.41
SPPL3-208ENST00000543854 ANGEL2Q5VTE6 544 aaKnown RBP23.83■■□□□ 1.41
SPPL3-208ENST00000543854 VPS37DQ86XT2 251 aa23.83■■□□□ 1.41
SPPL3-208ENST00000543854 FBXO3Q9UK99 471 aa23.83■■□□□ 1.41
SPPL3-208ENST00000543854 POLR2AP24928 1970 aaKnown RBP23.83■■□□□ 1.41
SPPL3-208ENST00000543854 CAVIN4Q5BKX8 364 aa23.82■■□□□ 1.4
SPPL3-208ENST00000543854 FAM84BQ96KN1 310 aaPredicted RBP23.82■■□□□ 1.4
SPPL3-208ENST00000543854 SIL1Q9H173 461 aa23.82■■□□□ 1.4
SPPL3-208ENST00000543854 PITPNM2Q9BZ72 1349 aa23.82■■□□□ 1.4
SPPL3-208ENST00000543854 CIAO1O76071 339 aa23.81■■□□□ 1.4
SPPL3-208ENST00000543854 FKBP1AP62942 108 aaKnown RBP23.81■■□□□ 1.4
SPPL3-208ENST00000543854 DEFB115Q30KQ5 88 aa23.81■■□□□ 1.4
SPPL3-208ENST00000543854 CERS5Q8N5B7 392 aa23.81■■□□□ 1.4
SPPL3-208ENST00000543854 TMEM57Q8N5G2 664 aa23.81■■□□□ 1.4
SPPL3-208ENST00000543854 JAG2Q9Y219 1238 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms