RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 SDSP20132 328 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 NFIXQ14938 502 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 TBC1D9BQ66K14 1250 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 BLOC1S2Q6QNY1 142 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 SP8Q8IXZ3 490 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 HAUS7Q99871 368 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 GREM2Q9H772 168 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 USP5P45974 858 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 GNL2Q13823 731 aaKnown RBP9.48□□□□□ -0.89
TRIM59-208ENST00000543469 OGFOD1Q8N543 542 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 VPS33BQ9H267 617 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 ZNF804BA4D1E1 1349 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 MYO3BQ8WXR4 1341 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 NUCB2P80303 420 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 FOXO4P98177 505 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 CHRNDQ07001 517 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 FAM182BQ5T319 152 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 JARID2Q92833 1246 aaPredicted RBP9.48□□□□□ -0.89
TRIM59-208ENST00000543469 ESYT1Q9BSJ8 1104 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 SH2B1Q9NRF2 756 aaPredicted RBP9.48□□□□□ -0.89
TRIM59-208ENST00000543469 SRP68Q9UHB9 627 aaKnown RBP9.48□□□□□ -0.89
TRIM59-208ENST00000543469 SUGT1Q9Y2Z0 365 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 DOT1LQ8TEK3 1739 aa9.48□□□□□ -0.89
TRIM59-208ENST00000543469 TRIM29Q14134 588 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 CWC27Q6UX04 472 aaKnown RBP9.47□□□□□ -0.89
TRIM59-208ENST00000543469 APPBP2Q92624 585 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 KRT23Q9C075 422 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 CPLX1O14810 134 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 PCP11498 1178 aaKnown RBP9.47□□□□□ -0.89
TRIM59-208ENST00000543469 EN1Q05925 392 aaPredicted RBP9.47□□□□□ -0.89
TRIM59-208ENST00000543469 PDE4BQ07343 736 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 TMTC2Q8N394 836 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 TAOK2Q9UL54 1235 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 TNNI2P48788 182 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 EIF6P56537 245 aaKnown RBP9.47□□□□□ -0.89
TRIM59-208ENST00000543469 NFXL1Q6ZNB6 911 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 TBC1D9Q6ZT07 1266 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 NIM1KQ8IY84 436 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 FAM184AQ8NB25 1140 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 TRAF1Q13077 416 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 TTLL6Q8N841 843 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 WASF1Q92558 559 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 COA1Q9GZY4 146 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 NHSQ6T4R5 1651 aa9.47□□□□□ -0.89
TRIM59-208ENST00000543469 CCDC196A0A1B0GTZ2 297 aa9.46□□□□□ -0.89
TRIM59-208ENST00000543469 SPATA5Q8NB90 893 aa9.46□□□□□ -0.89
TRIM59-208ENST00000543469 MAGEB6P1A0A0J9YX57 407 aa9.46□□□□□ -0.89
TRIM59-208ENST00000543469 ZNF213O14771 459 aa9.46□□□□□ -0.89
TRIM59-208ENST00000543469 MTFR1LQ9H019 292 aa9.46□□□□□ -0.89
TRIM59-208ENST00000543469 CCDC171Q6TFL3 1326 aa9.46□□□□□ -0.9
TRIM59-208ENST00000543469 RIC1Q4ADV7 1423 aa9.46□□□□□ -0.9
TRIM59-208ENST00000543469 CYP7A1P22680 504 aa9.46□□□□□ -0.9
TRIM59-208ENST00000543469 TNIP1Q15025 636 aa9.46□□□□□ -0.9
TRIM59-208ENST00000543469 UBE3CQ15386 1083 aa9.46□□□□□ -0.9
TRIM59-208ENST00000543469 PIM2Q9P1W9 311 aa9.46□□□□□ -0.9
TRIM59-208ENST00000543469 RBM5P52756 815 aaKnown RBP eCLIP9.46□□□□□ -0.9
TRIM59-208ENST00000543469 TGFB2P61812 414 aa9.46□□□□□ -0.9
TRIM59-208ENST00000543469 SPON1Q9HCB6 807 aa9.46□□□□□ -0.9
TRIM59-208ENST00000543469 BRMS1Q9HCU9 246 aa9.46□□□□□ -0.9
TRIM59-208ENST00000543469 THSD7AQ9UPZ6 1657 aa9.46□□□□□ -0.9
TRIM59-208ENST00000543469 DALRD3Q5D0E6 543 aaKnown RBP9.45□□□□□ -0.9
TRIM59-208ENST00000543469 ANP32BQ92688 251 aaKnown RBP9.45□□□□□ -0.9
TRIM59-208ENST00000543469 DBNDD2Q9BQY9 259 aa9.45□□□□□ -0.9
TRIM59-208ENST00000543469 UBAC1Q9BSL1 405 aa9.45□□□□□ -0.9
TRIM59-208ENST00000543469 CIZ1Q9ULV3 898 aaPredicted RBP9.45□□□□□ -0.9
TRIM59-208ENST00000543469 CHMLP26374 656 aa9.45□□□□□ -0.9
TRIM59-208ENST00000543469 TSHZ2Q9NRE2 1034 aa9.45□□□□□ -0.9
TRIM59-208ENST00000543469 CICQ96RK0 1608 aaPredicted RBP9.45□□□□□ -0.9
TRIM59-208ENST00000543469 POLR3DP05423 398 aaPredicted RBP9.45□□□□□ -0.9
TRIM59-208ENST00000543469 DSCC1Q9BVC3 393 aa9.45□□□□□ -0.9
TRIM59-208ENST00000543469 CTDP1Q9Y5B0 961 aaPredicted RBP9.45□□□□□ -0.9
TRIM59-208ENST00000543469 WNK3Q9BYP7 1800 aa9.45□□□□□ -0.9
TRIM59-208ENST00000543469 PDS5AQ29RF7 1337 aaKnown RBP9.45□□□□□ -0.9
TRIM59-208ENST00000543469 GYS1P13807 737 aa9.44□□□□□ -0.9
TRIM59-208ENST00000543469 SAFBQ15424 915 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRIM59-208ENST00000543469 SLC9C2Q5TAH2 1124 aa9.44□□□□□ -0.9
TRIM59-208ENST00000543469 PRR5LQ6MZQ0 368 aa9.44□□□□□ -0.9
TRIM59-208ENST00000543469 IQCA1Q86XH1 822 aa9.44□□□□□ -0.9
TRIM59-208ENST00000543469 TTC6Q86TZ1 520 aa9.44□□□□□ -0.9
TRIM59-208ENST00000543469 GOLGA6L4A6NEF3 574 aa9.44□□□□□ -0.9
TRIM59-208ENST00000543469 CCDC69A6NI79 296 aa9.44□□□□□ -0.9
TRIM59-208ENST00000543469 NCOA7Q8NI08 942 aa9.44□□□□□ -0.9
TRIM59-208ENST00000543469 ZNF594Q96JF6 807 aaPredicted RBP9.44□□□□□ -0.9
TRIM59-208ENST00000543469 SMC3Q9UQE7 1217 aa9.44□□□□□ -0.9
TRIM59-208ENST00000543469 GLI3P10071 1580 aa9.44□□□□□ -0.9
TRIM59-208ENST00000543469 LMOD1P29536 600 aaPredicted RBP9.44□□□□□ -0.9
TRIM59-208ENST00000543469 PDRG1Q9NUG6 133 aa9.44□□□□□ -0.9
TRIM59-208ENST00000543469 C5P01031 1676 aa9.43□□□□□ -0.9
TRIM59-208ENST00000543469 CCDC102BQ68D86 513 aa9.43□□□□□ -0.9
TRIM59-208ENST00000543469 LARGE2Q8N3Y3 721 aa9.43□□□□□ -0.9
TRIM59-208ENST00000543469 SYAP1Q96A49 352 aaPredicted RBP9.43□□□□□ -0.9
TRIM59-208ENST00000543469 EAF2Q96CJ1 260 aaPredicted RBP9.43□□□□□ -0.9
TRIM59-208ENST00000543469 CHMP5Q9NZZ3 219 aa9.43□□□□□ -0.9
TRIM59-208ENST00000543469 H3BQV1 296 aa9.43□□□□□ -0.9
TRIM59-208ENST00000543469 ZRSR1Q15695 479 aaKnown RBP9.43□□□□□ -0.9
TRIM59-208ENST00000543469 EZH2Q15910 746 aaKnown RBP9.43□□□□□ -0.9
TRIM59-208ENST00000543469 IFFO2Q5TF58 517 aa9.43□□□□□ -0.9
TRIM59-208ENST00000543469 RBM27Q9P2N5 1060 aaKnown RBP9.43□□□□□ -0.9
TRIM59-208ENST00000543469 POTEAQ6S8J7 498 aa9.43□□□□□ -0.9
TRIM59-208ENST00000543469 TRIM22Q8IYM9 498 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms