RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 IP6K1Q92551 441 aa27.62■■■□□ 2.01
SHD-201ENST00000543264 LRRC59Q96AG4 307 aaKnown RBP27.62■■■□□ 2.01
SHD-201ENST00000543264 CCDC9Q9Y3X0 531 aaKnown RBP27.62■■■□□ 2.01
SHD-201ENST00000543264 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.62■■■□□ 2.01
SHD-201ENST00000543264 FHOD1Q9Y613 1164 aa27.62■■■□□ 2.01
SHD-201ENST00000543264 BIN1O00499 593 aa27.61■■■□□ 2.01
SHD-201ENST00000543264 RNMTO43148 476 aaKnown RBP27.61■■■□□ 2.01
SHD-201ENST00000543264 PSDA5PKW4 1024 aaPredicted RBP27.61■■■□□ 2.01
SHD-201ENST00000543264 NDUFA8P51970 172 aa27.61■■■□□ 2.01
SHD-201ENST00000543264 DDX46Q7L014 1031 aaKnown RBP27.61■■■□□ 2.01
SHD-201ENST00000543264 UBR1Q8IWV7 1749 aa27.61■■■□□ 2.01
SHD-201ENST00000543264 TFCP2Q12800 502 aa27.6■■■□□ 2.01
SHD-201ENST00000543264 PLEKHO1Q53GL0 409 aaPredicted RBP27.6■■■□□ 2.01
SHD-201ENST00000543264 KIAA1468Q9P260 1216 aa27.6■■■□□ 2.01
SHD-201ENST00000543264 DIP2AQ14689 1571 aa27.6■■■□□ 2.01
SHD-201ENST00000543264 IRX5P78411 483 aaPredicted RBP27.59■■■□□ 2.01
SHD-201ENST00000543264 TNNI3KQ59H18 835 aa27.59■■■□□ 2.01
SHD-201ENST00000543264 FPGT-TNNI3KV9GXZ4 949 aa27.59■■■□□ 2.01
SHD-201ENST00000543264 HMGB1P09429 215 aaKnown RBP27.59■■■□□ 2.01
SHD-201ENST00000543264 SF3A1Q15459 793 aaKnown RBP27.59■■■□□ 2.01
SHD-201ENST00000543264 CALCOCO1Q9P1Z2 691 aa27.59■■■□□ 2.01
SHD-201ENST00000543264 C1orf141Q5JVX7 400 aa27.58■■■□□ 2.01
SHD-201ENST00000543264 ADALQ6DHV7 355 aa27.58■■■□□ 2.01
SHD-201ENST00000543264 CHST3Q7LGC8 479 aa27.58■■■□□ 2.01
SHD-201ENST00000543264 MYH15Q9Y2K3 1946 aa27.58■■■□□ 2.01
SHD-201ENST00000543264 NRDCO43847 1150 aa27.58■■■□□ 2.01
SHD-201ENST00000543264 PNMA6AP0CW24 399 aaPredicted RBP27.58■■■□□ 2.01
SHD-201ENST00000543264 DNAI1Q9UI46 699 aa27.57■■■□□ 2
SHD-201ENST00000543264 EID1Q9Y6B2 187 aa27.57■■■□□ 2
SHD-201ENST00000543264 DBNDD2Q9BQY9 259 aa27.57■■■□□ 2
SHD-201ENST00000543264 DDX21Q9NR30 783 aaKnown RBP eCLIP27.57■■■□□ 2
SHD-201ENST00000543264 FAM193AP78312 1265 aa27.56■■■□□ 2
SHD-201ENST00000543264 STK38Q15208 465 aa27.56■■■□□ 2
SHD-201ENST00000543264 OTUD7BQ6GQQ9 843 aa27.56■■■□□ 2
SHD-201ENST00000543264 MYL6BP14649 208 aa27.55■■■□□ 2
SHD-201ENST00000543264 PLA2G4AP47712 749 aa27.55■■■□□ 2
SHD-201ENST00000543264 NEXNQ0ZGT2 675 aa27.55■■■□□ 2
SHD-201ENST00000543264 UBXN4Q92575 508 aa27.55■■■□□ 2
SHD-201ENST00000543264 RTEL1Q9NZ71 1219 aa27.55■■■□□ 2
SHD-201ENST00000543264 KIF13AQ9H1H9 1805 aa27.55■■■□□ 2
SHD-201ENST00000543264 A0A0G2JLW4 131 aa27.55■■■□□ 2
SHD-201ENST00000543264 NEURL1BA8MQ27 555 aa27.55■■■□□ 2
SHD-201ENST00000543264 POLR3DP05423 398 aaPredicted RBP27.55■■■□□ 2
SHD-201ENST00000543264 CYP2C19P33261 490 aa27.55■■■□□ 2
SHD-201ENST00000543264 TPM4P67936 248 aa27.55■■■□□ 2
SHD-201ENST00000543264 ISM2Q6H9L7 571 aa27.55■■■□□ 2
SHD-201ENST00000543264 CLIC4Q9Y696 253 aa27.55■■■□□ 2
SHD-201ENST00000543264 MARF1Q9Y4F3 1742 aaKnown RBP27.55■■■□□ 2
SHD-201ENST00000543264 CDK11BP21127 795 aaKnown RBP27.55■■■□□ 2
SHD-201ENST00000543264 LMOD1P29536 600 aaPredicted RBP27.55■■■□□ 2
SHD-201ENST00000543264 PDIA3P30101 505 aaKnown RBP27.55■■■□□ 2
SHD-201ENST00000543264 ETF1P62495 437 aaKnown RBP27.55■■■□□ 2
SHD-201ENST00000543264 EXOSC10Q01780 885 aaKnown RBP27.55■■■□□ 2
SHD-201ENST00000543264 SLC3A2P08195 630 aaKnown RBP27.54■■■□□ 2
SHD-201ENST00000543264 GCKRQ14397 625 aa27.54■■■□□ 2
SHD-201ENST00000543264 MYD88Q99836 296 aa27.54■■■□□ 2
SHD-201ENST00000543264 LINC00301Q8NCQ3 95 aa27.54■■■□□ 2
SHD-201ENST00000543264 BPIFA3Q9BQP9 254 aa27.54■■■□□ 2
SHD-201ENST00000543264 NCAPD2Q15021 1401 aa27.53■■■□□ 2
SHD-201ENST00000543264 PDIA6Q15084 440 aa27.53■■■□□ 2
SHD-201ENST00000543264 TMCO3Q6UWJ1 677 aa27.53■■■□□ 2
SHD-201ENST00000543264 CREBRFQ8IUR6 639 aa27.53■■■□□ 2
SHD-201ENST00000543264 HAUS7Q99871 368 aa27.53■■■□□ 2
SHD-201ENST00000543264 COPRSQ9NQ92 184 aa27.53■■■□□ 2
SHD-201ENST00000543264 SALL1Q9NSC2 1324 aa27.53■■■□□ 2
SHD-201ENST00000543264 SLIT1O75093 1534 aa27.53■■■□□ 2
SHD-201ENST00000543264 A0A1W2PQ27 194 aa27.53■■■□□ 2
SHD-201ENST00000543264 A0A1W2PQ64 194 aa27.53■■■□□ 2
SHD-201ENST00000543264 A0A1W2PQD8 194 aa27.53■■■□□ 2
SHD-201ENST00000543264 CARMIL3Q8ND23 1372 aa27.52■■■□□ 2
SHD-201ENST00000543264 POLR3GO15318 223 aaPredicted RBP27.52■■■□□ 2
SHD-201ENST00000543264 KCNJ6P48051 423 aa27.52■■■□□ 2
SHD-201ENST00000543264 PTPN12Q05209 780 aaKnown RBP27.52■■■□□ 2
SHD-201ENST00000543264 ARGLU1Q9NWB6 273 aaPredicted RBP27.52■■■□□ 2
SHD-201ENST00000543264 ORC3Q9UBD5 711 aaPredicted RBP27.52■■■□□ 2
SHD-201ENST00000543264 FDPSP14324 419 aaKnown RBP27.52■■■□□ 2
SHD-201ENST00000543264 MNS1Q8NEH6 495 aa27.52■■■□□ 2
SHD-201ENST00000543264 HEG1Q9ULI3 1381 aa27.51■■□□□ 1.99
SHD-201ENST00000543264 E7EWF7 191 aa27.51■■□□□ 1.99
SHD-201ENST00000543264 URI1O94763 535 aaPredicted RBP27.51■■□□□ 1.99
SHD-201ENST00000543264 TUBB4AP04350 444 aa27.51■■□□□ 1.99
SHD-201ENST00000543264 NLRP12P59046 1061 aa27.51■■□□□ 1.99
SHD-201ENST00000543264 FANCCQ00597 558 aa27.51■■□□□ 1.99
SHD-201ENST00000543264 NCAPHQ15003 741 aa27.51■■□□□ 1.99
SHD-201ENST00000543264 TRERF1Q96PN7 1200 aa27.51■■□□□ 1.99
SHD-201ENST00000543264 HNRNPH2P55795 449 aaKnown RBP27.51■■□□□ 1.99
SHD-201ENST00000543264 AGXT2Q9BYV1 514 aa27.51■■□□□ 1.99
SHD-201ENST00000543264 ZNF202O95125 648 aa27.5■■□□□ 1.99
SHD-201ENST00000543264 ATP1A3P13637 1013 aa27.5■■□□□ 1.99
SHD-201ENST00000543264 AMOTQ4VCS5 1084 aa27.5■■□□□ 1.99
SHD-201ENST00000543264 KBTBD3Q8NAB2 608 aa27.5■■□□□ 1.99
SHD-201ENST00000543264 TBX22Q9Y458 520 aa27.5■■□□□ 1.99
SHD-201ENST00000543264 ZRANB2O95218 330 aaKnown RBP eCLIP27.5■■□□□ 1.99
SHD-201ENST00000543264 LAMA4Q16363 1823 aa27.49■■□□□ 1.99
SHD-201ENST00000543264 XAGE3Q8WTP9 111 aa27.49■■□□□ 1.99
SHD-201ENST00000543264 ZNF274Q96GC6 653 aaPredicted RBP27.49■■□□□ 1.99
SHD-201ENST00000543264 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.49■■□□□ 1.99
SHD-201ENST00000543264 NEDD4P46934 1319 aa27.49■■□□□ 1.99
SHD-201ENST00000543264 VGLL3A8MV65 326 aa27.49■■□□□ 1.99
SHD-201ENST00000543264 GOLIM4O00461 696 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms