RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 USP37Q86T82 979 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 LINS1Q8NG48 757 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 CEP63Q96MT8 703 aa14.91□□□□□ -0.02
TNC-212ENST00000542877 GPATCH11Q8N954 259 aa14.9□□□□□ -0.02
TNC-212ENST00000542877 C6orf229H3BNL8 230 aa14.9□□□□□ -0.02
TNC-212ENST00000542877 TSPY3P0CV98 308 aa14.9□□□□□ -0.02
TNC-212ENST00000542877 TSPY8P0CW00 308 aa14.9□□□□□ -0.02
TNC-212ENST00000542877 ASIC1P78348 528 aa14.9□□□□□ -0.02
TNC-212ENST00000542877 DHX58Q96C10 678 aa14.9□□□□□ -0.02
TNC-212ENST00000542877 FERMT1Q9BQL6 677 aa14.9□□□□□ -0.02
TNC-212ENST00000542877 CAPN2P17655 700 aa14.9□□□□□ -0.02
TNC-212ENST00000542877 AKAP4Q5JQC9 854 aa14.9□□□□□ -0.02
TNC-212ENST00000542877 CCDC77Q9BR77 488 aa14.9□□□□□ -0.02
TNC-212ENST00000542877 GPATCH8Q9UKJ3 1502 aaKnown RBP14.9□□□□□ -0.02
TNC-212ENST00000542877 SLC9C2Q5TAH2 1124 aa14.9□□□□□ -0.02
TNC-212ENST00000542877 DHX32Q7L7V1 743 aaKnown RBP14.9□□□□□ -0.02
TNC-212ENST00000542877 BICDL2A1A5D9 508 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 RNF113AO15541 343 aaKnown RBP14.89□□□□□ -0.03
TNC-212ENST00000542877 CALML3P27482 149 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 CCDC42Q96M95 316 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 IFNKQ9P0W0 207 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 A0A1W2PRG0 241 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 ATRIPQ8WXE1 791 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 PPM1EQ8WY54 764 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 DRC1Q96MC2 740 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 OGFRQ9NZT2 677 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.89□□□□□ -0.03
TNC-212ENST00000542877 TNNQ9UQP3 1299 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 V9GYY5 206 aaPredicted RBP14.89□□□□□ -0.03
TNC-212ENST00000542877 RTL9Q8NET4 1388 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 PTPDC1A2A3K4 754 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 GNAT2P19087 354 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.89□□□□□ -0.03
TNC-212ENST00000542877 KDM5BQ9UGL1 1544 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 THOC2Q8NI27 1593 aaKnown RBP14.89□□□□□ -0.03
TNC-212ENST00000542877 FBLN1P23142 703 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 FBF1Q8TES7 1133 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 FANCAO15360 1455 aa14.89□□□□□ -0.03
TNC-212ENST00000542877 SOS1Q07889 1333 aaPredicted RBP14.88□□□□□ -0.03
TNC-212ENST00000542877 SAMM50Q9Y512 469 aa14.88□□□□□ -0.03
TNC-212ENST00000542877 KRT13P13646 458 aa14.88□□□□□ -0.03
TNC-212ENST00000542877 SYT10Q6XYQ8 523 aa14.88□□□□□ -0.03
TNC-212ENST00000542877 MMRN2Q9H8L6 949 aa14.88□□□□□ -0.03
TNC-212ENST00000542877 LAMC3Q9Y6N6 1575 aa14.88□□□□□ -0.03
TNC-212ENST00000542877 EIF4A2Q14240 407 aaKnown RBP14.88□□□□□ -0.03
TNC-212ENST00000542877 SEC24BO95487 1268 aa14.88□□□□□ -0.03
TNC-212ENST00000542877 DENND4BO75064 1496 aaPredicted RBP14.88□□□□□ -0.03
TNC-212ENST00000542877 EIF2AK4Q9P2K8 1649 aaKnown RBP14.87□□□□□ -0.03
TNC-212ENST00000542877 EBAG9O00559 213 aa14.87□□□□□ -0.03
TNC-212ENST00000542877 KIF4AO95239 1232 aa14.87□□□□□ -0.03
TNC-212ENST00000542877 CCDC129Q6ZRS4 1044 aa14.87□□□□□ -0.03
TNC-212ENST00000542877 HEATR3Q7Z4Q2 680 aa14.87□□□□□ -0.03
TNC-212ENST00000542877 NBPF11Q86T75 865 aa14.87□□□□□ -0.03
TNC-212ENST00000542877 ANKS4BQ8N8V4 417 aa14.87□□□□□ -0.03
TNC-212ENST00000542877 POLKQ9UBT6 870 aa14.87□□□□□ -0.03
TNC-212ENST00000542877 ATP2C2O75185 946 aa14.87□□□□□ -0.03
TNC-212ENST00000542877 APOBRQ0VD83 1088 aa14.87□□□□□ -0.03
TNC-212ENST00000542877 ARFGAP2Q8N6H7 521 aa14.87□□□□□ -0.03
TNC-212ENST00000542877 PUF60Q9UHX1 559 aaKnown RBP14.87□□□□□ -0.03
TNC-212ENST00000542877 PA2G4Q9UQ80 394 aaKnown RBP14.87□□□□□ -0.03
TNC-212ENST00000542877 PPIP5K1Q6PFW1 1433 aa14.87□□□□□ -0.03
TNC-212ENST00000542877 ZFP91Q96JP5 570 aaPredicted RBP14.87□□□□□ -0.03
TNC-212ENST00000542877 KRT2P35908 639 aa14.87□□□□□ -0.03
TNC-212ENST00000542877 CNGA4Q8IV77 575 aa14.87□□□□□ -0.03
TNC-212ENST00000542877 PPP1R14CQ8TAE6 165 aa14.87□□□□□ -0.03
TNC-212ENST00000542877 ZNF569Q5MCW4 686 aa14.86□□□□□ -0.03
TNC-212ENST00000542877 TTC14Q96N46 770 aa14.86□□□□□ -0.03
TNC-212ENST00000542877 TSNARE1Q96NA8 513 aa14.86□□□□□ -0.03
TNC-212ENST00000542877 C6orf50Q9HD87 102 aa14.86□□□□□ -0.03
TNC-212ENST00000542877 UBXN1Q04323 297 aa14.86□□□□□ -0.03
TNC-212ENST00000542877 GTF2A1P52655 376 aaPredicted RBP14.86□□□□□ -0.03
TNC-212ENST00000542877 NAPAP54920 295 aa14.86□□□□□ -0.03
TNC-212ENST00000542877 MYL5Q02045 173 aa14.86□□□□□ -0.03
TNC-212ENST00000542877 NAA16Q6N069 864 aaPredicted RBP14.86□□□□□ -0.03
TNC-212ENST00000542877 TSPYL6Q8N831 410 aa14.86□□□□□ -0.03
TNC-212ENST00000542877 GUCA1BQ9UMX6 200 aa14.86□□□□□ -0.03
TNC-212ENST00000542877 ERO1AQ96HE7 468 aa14.86□□□□□ -0.03
TNC-212ENST00000542877 DUOX2Q9NRD8 1548 aa14.86□□□□□ -0.03
TNC-212ENST00000542877 UGGT2Q9NYU1 1516 aa14.86□□□□□ -0.03
TNC-212ENST00000542877 ZFYVE9O95405 1425 aa14.86□□□□□ -0.03
TNC-212ENST00000542877 PTPRKQ15262 1439 aa14.86□□□□□ -0.03
TNC-212ENST00000542877 FAM160A1Q05DH4 1040 aa14.85□□□□□ -0.03
TNC-212ENST00000542877 LZTFL1Q9NQ48 299 aa14.85□□□□□ -0.03
TNC-212ENST00000542877 VPS18Q9P253 973 aa14.85□□□□□ -0.03
TNC-212ENST00000542877 KARSQ15046 597 aaKnown RBP14.85□□□□□ -0.03
TNC-212ENST00000542877 MSL1Q68DK7 614 aa14.85□□□□□ -0.03
TNC-212ENST00000542877 LUC7L2Q9Y383 392 aaKnown RBP14.85□□□□□ -0.03
TNC-212ENST00000542877 ELP1O95163 1332 aa14.85□□□□□ -0.03
TNC-212ENST00000542877 VAV2P52735 878 aa14.85□□□□□ -0.03
TNC-212ENST00000542877 MTHFSDQ2M296 383 aaKnown RBP14.85□□□□□ -0.03
TNC-212ENST00000542877 CCDC121Q6ZUS5 278 aa14.85□□□□□ -0.03
TNC-212ENST00000542877 NEK11Q8NG66 645 aa14.85□□□□□ -0.03
TNC-212ENST00000542877 CCDC97Q96F63 343 aaPredicted RBP14.85□□□□□ -0.03
TNC-212ENST00000542877 BICD1Q96G01 975 aa14.85□□□□□ -0.03
TNC-212ENST00000542877 IQCGQ9H095 443 aaKnown RBP14.85□□□□□ -0.03
TNC-212ENST00000542877 KRT79Q5XKE5 535 aa14.85□□□□□ -0.03
TNC-212ENST00000542877 HDXQ7Z353 690 aa14.85□□□□□ -0.03
TNC-212ENST00000542877 IQUBQ8NA54 791 aa14.85□□□□□ -0.03
TNC-212ENST00000542877 SREK1Q8WXA9 508 aaKnown RBP14.85□□□□□ -0.03
TNC-212ENST00000542877 FERP16591 822 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms