RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 PAG1Q9NWQ8 432 aa16.11■□□□□ 0.17
CHFR-221ENST00000542714 GOLIM4O00461 696 aa16.1■□□□□ 0.17
CHFR-221ENST00000542714 NPR1P16066 1061 aa16.1■□□□□ 0.17
CHFR-221ENST00000542714 KBTBD3Q8NAB2 608 aa16.1■□□□□ 0.17
CHFR-221ENST00000542714 ANTXR1Q9H6X2 564 aa16.1■□□□□ 0.17
CHFR-221ENST00000542714 SNRKQ9NRH2 765 aa16.1■□□□□ 0.17
CHFR-221ENST00000542714 ZNF804BA4D1E1 1349 aa16.1■□□□□ 0.17
CHFR-221ENST00000542714 COL1A1P02452 1464 aaPredicted RBP16.1■□□□□ 0.17
CHFR-221ENST00000542714 DUOX1Q9NRD9 1551 aa16.09■□□□□ 0.17
CHFR-221ENST00000542714 BBOX1O75936 387 aa16.09■□□□□ 0.17
CHFR-221ENST00000542714 UQCRFS1P1P0C7P4 283 aa16.09■□□□□ 0.17
CHFR-221ENST00000542714 ZAP70P43403 619 aa16.09■□□□□ 0.17
CHFR-221ENST00000542714 BCAMP50895 628 aa16.09■□□□□ 0.17
CHFR-221ENST00000542714 GPSM2P81274 684 aa16.09■□□□□ 0.17
CHFR-221ENST00000542714 NMIQ13287 307 aaPredicted RBP16.09■□□□□ 0.17
CHFR-221ENST00000542714 C22orf23Q9BZE7 217 aa16.09■□□□□ 0.17
CHFR-221ENST00000542714 UPF2Q9HAU5 1272 aaKnown RBP16.09■□□□□ 0.17
CHFR-221ENST00000542714 PPEF1O14829 653 aaPredicted RBP16.08■□□□□ 0.16
CHFR-221ENST00000542714 SGSM2O43147 1006 aa16.08■□□□□ 0.16
CHFR-221ENST00000542714 CHGBP05060 677 aa16.08■□□□□ 0.16
CHFR-221ENST00000542714 GYG1P46976 350 aa16.08■□□□□ 0.16
CHFR-221ENST00000542714 C2CD5Q86YS7 1000 aa16.08■□□□□ 0.16
CHFR-221ENST00000542714 MASTLQ96GX5 879 aa16.08■□□□□ 0.16
CHFR-221ENST00000542714 FAM227BQ96M60 508 aa16.08■□□□□ 0.16
CHFR-221ENST00000542714 USP26Q9BXU7 913 aa16.08■□□□□ 0.16
CHFR-221ENST00000542714 DIAPH3Q9NSV4 1193 aa16.08■□□□□ 0.16
CHFR-221ENST00000542714 HMG20BQ9P0W2 317 aa16.08■□□□□ 0.16
CHFR-221ENST00000542714 XDHP47989 1333 aa16.08■□□□□ 0.16
CHFR-221ENST00000542714 A0A0D9SFI3 127 aa16.07■□□□□ 0.16
CHFR-221ENST00000542714 HIP1O00291 1037 aa16.07■□□□□ 0.16
CHFR-221ENST00000542714 RBM25P49756 843 aaKnown RBP16.07■□□□□ 0.16
CHFR-221ENST00000542714 RASGRF1Q13972 1273 aa16.07■□□□□ 0.16
CHFR-221ENST00000542714 R3HDM1Q15032 1099 aaKnown RBP16.07■□□□□ 0.16
CHFR-221ENST00000542714 CWC27Q6UX04 472 aaKnown RBP16.07■□□□□ 0.16
CHFR-221ENST00000542714 TMC4Q7Z404 712 aa16.07■□□□□ 0.16
CHFR-221ENST00000542714 FBXO33Q7Z6M2 555 aa16.07■□□□□ 0.16
CHFR-221ENST00000542714 FAM84BQ96KN1 310 aaPredicted RBP16.07■□□□□ 0.16
CHFR-221ENST00000542714 MED23Q9ULK4 1368 aa16.07■□□□□ 0.16
CHFR-221ENST00000542714 EIF5BO60841 1220 aaKnown RBP16.06■□□□□ 0.16
CHFR-221ENST00000542714 REC8O95072 547 aa16.06■□□□□ 0.16
CHFR-221ENST00000542714 ZBTB7AO95365 584 aa16.06■□□□□ 0.16
CHFR-221ENST00000542714 CYP2E1P05181 493 aaPredicted RBP16.06■□□□□ 0.16
CHFR-221ENST00000542714 CHRNA5P30532 468 aa16.06■□□□□ 0.16
CHFR-221ENST00000542714 KCNJ4P48050 445 aa16.06■□□□□ 0.16
CHFR-221ENST00000542714 FKBP4Q02790 459 aaKnown RBP eCLIP16.06■□□□□ 0.16
CHFR-221ENST00000542714 STYK1Q6J9G0 422 aa16.06■□□□□ 0.16
CHFR-221ENST00000542714 TXNRD3Q86VQ6 643 aa16.06■□□□□ 0.16
CHFR-221ENST00000542714 SP8Q8IXZ3 490 aa16.06■□□□□ 0.16
CHFR-221ENST00000542714 PIH1D3Q9NQM4 214 aaKnown RBP16.06■□□□□ 0.16
CHFR-221ENST00000542714 PODXL2Q9NZ53 605 aa16.06■□□□□ 0.16
CHFR-221ENST00000542714 LEMD3Q9Y2U8 911 aa16.06■□□□□ 0.16
CHFR-221ENST00000542714 RAD50Q92878 1312 aa16.05■□□□□ 0.16
CHFR-221ENST00000542714 ALDH1B1P30837 517 aa16.05■□□□□ 0.16
CHFR-221ENST00000542714 SLFNL1Q499Z3 407 aa16.05■□□□□ 0.16
CHFR-221ENST00000542714 C15orf52Q6ZUT6 534 aaKnown RBP16.05■□□□□ 0.16
CHFR-221ENST00000542714 TICAM2Q86XR7 235 aa16.05■□□□□ 0.16
CHFR-221ENST00000542714 SPATA5Q8NB90 893 aa16.05■□□□□ 0.16
CHFR-221ENST00000542714 GPR101Q96P66 508 aaPredicted RBP16.05■□□□□ 0.16
CHFR-221ENST00000542714 LSG1Q9H089 658 aaKnown RBP16.05■□□□□ 0.16
CHFR-221ENST00000542714 ANKIB1Q9P2G1 1089 aa16.05■□□□□ 0.16
CHFR-221ENST00000542714 ATP6V0A2Q9Y487 856 aa16.05■□□□□ 0.16
CHFR-221ENST00000542714 BRCA1P38398 1863 aaKnown RBP16.05■□□□□ 0.16
CHFR-221ENST00000542714 H0YIN7 160 aa16.04■□□□□ 0.16
CHFR-221ENST00000542714 OLFM4Q6UX06 510 aa16.04■□□□□ 0.16
CHFR-221ENST00000542714 RUFY2Q8WXA3 655 aa16.04■□□□□ 0.16
CHFR-221ENST00000542714 MTFR1LQ9H019 292 aa16.04■□□□□ 0.16
CHFR-221ENST00000542714 ATF5Q9Y2D1 282 aaPredicted RBP16.04■□□□□ 0.16
CHFR-221ENST00000542714 MAST2Q6P0Q8 1798 aa16.04■□□□□ 0.16
CHFR-221ENST00000542714 ZBTB22O15209 634 aa16.03■□□□□ 0.16
CHFR-221ENST00000542714 UFL1O94874 794 aa16.03■□□□□ 0.16
CHFR-221ENST00000542714 ATP2B4P23634 1241 aa16.03■□□□□ 0.16
CHFR-221ENST00000542714 ANP32AP39687 249 aaKnown RBP16.03■□□□□ 0.16
CHFR-221ENST00000542714 CAVIN4Q5BKX8 364 aa16.03■□□□□ 0.16
CHFR-221ENST00000542714 ZMYM1Q5SVZ6 1142 aa16.03■□□□□ 0.16
CHFR-221ENST00000542714 ZNF622Q969S3 477 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHFR-221ENST00000542714 KIF2CQ99661 725 aa16.03■□□□□ 0.16
CHFR-221ENST00000542714 ANO2Q9NQ90 1003 aa16.03■□□□□ 0.16
CHFR-221ENST00000542714 IQSEC3Q9UPP2 1182 aaPredicted RBP16.03■□□□□ 0.16
CHFR-221ENST00000542714 CHD4Q14839 1912 aa16.03■□□□□ 0.16
CHFR-221ENST00000542714 SNED1Q8TER0 1413 aa16.02■□□□□ 0.16
CHFR-221ENST00000542714 RNF113AO15541 343 aaKnown RBP16.02■□□□□ 0.16
CHFR-221ENST00000542714 HIBADHP31937 336 aaKnown RBP16.02■□□□□ 0.16
CHFR-221ENST00000542714 PRPF40BQ6NWY9 871 aaKnown RBP16.02■□□□□ 0.16
CHFR-221ENST00000542714 ZNF589Q86UQ0 364 aaPredicted RBP16.02■□□□□ 0.16
CHFR-221ENST00000542714 TBC1D16Q8TBP0 767 aa16.02■□□□□ 0.16
CHFR-221ENST00000542714 SEC62Q99442 399 aaKnown RBP16.02■□□□□ 0.16
CHFR-221ENST00000542714 SGIP1Q9BQI5 828 aa16.02■□□□□ 0.16
CHFR-221ENST00000542714 GNL3LQ9NVN8 582 aaKnown RBP16.02■□□□□ 0.16
CHFR-221ENST00000542714 POLLQ9UGP5 575 aa16.02■□□□□ 0.16
CHFR-221ENST00000542714 GGA1Q9UJY5 639 aa16.02■□□□□ 0.16
CHFR-221ENST00000542714 NSFL1CQ9UNZ2 370 aaKnown RBP16.02■□□□□ 0.16
CHFR-221ENST00000542714 CCDC88AQ3V6T2 1871 aa16.01■□□□□ 0.15
CHFR-221ENST00000542714 PSDA5PKW4 1024 aaPredicted RBP16.01■□□□□ 0.15
CHFR-221ENST00000542714 EPB41L2O43491 1005 aaKnown RBP16.01■□□□□ 0.15
CHFR-221ENST00000542714 PTH1RQ03431 593 aa16.01■□□□□ 0.15
CHFR-221ENST00000542714 TTF1Q15361 905 aaPredicted RBP16.01■□□□□ 0.15
CHFR-221ENST00000542714 ZNF646O15015 1829 aaPredicted RBP16.01■□□□□ 0.15
CHFR-221ENST00000542714 PDS5AQ29RF7 1337 aaKnown RBP16■□□□□ 0.15
CHFR-221ENST00000542714 CCDC171Q6TFL3 1326 aa16■□□□□ 0.15
CHFR-221ENST00000542714 SEMA3EO15041 775 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms