RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 RRS1Q15050 365 aaKnown RBP11.09□□□□□ -0.63
CLPB-211ENST00000542555 C9orf131Q5VYM1 1079 aa11.09□□□□□ -0.63
CLPB-211ENST00000542555 JMYQ8N9B5 988 aa11.09□□□□□ -0.63
CLPB-211ENST00000542555 SMC1BQ8NDV3 1235 aa11.09□□□□□ -0.63
CLPB-211ENST00000542555 GPKOWQ92917 476 aaPredicted RBP eCLIP11.09□□□□□ -0.63
CLPB-211ENST00000542555 ITGA6P23229 1130 aa11.08□□□□□ -0.64
CLPB-211ENST00000542555 QPCTQ16769 361 aa11.08□□□□□ -0.64
CLPB-211ENST00000542555 KANK3Q6NY19 840 aa11.08□□□□□ -0.64
CLPB-211ENST00000542555 Q6ZVU0 165 aa11.08□□□□□ -0.64
CLPB-211ENST00000542555 ZC3H15Q8WU90 426 aaKnown RBP11.08□□□□□ -0.64
CLPB-211ENST00000542555 PIGBQ92521 554 aa11.08□□□□□ -0.64
CLPB-211ENST00000542555 SIN3AQ96ST3 1273 aa11.08□□□□□ -0.64
CLPB-211ENST00000542555 PIM2Q9P1W9 311 aa11.08□□□□□ -0.64
CLPB-211ENST00000542555 SLC35F4A4IF30 521 aa11.07□□□□□ -0.64
CLPB-211ENST00000542555 FBLN1P23142 703 aa11.07□□□□□ -0.64
CLPB-211ENST00000542555 RFC4P35249 363 aa11.07□□□□□ -0.64
CLPB-211ENST00000542555 SCARF2Q96GP6 870 aaPredicted RBP11.07□□□□□ -0.64
CLPB-211ENST00000542555 CEP350Q5VT06 3117 aa11.07□□□□□ -0.64
CLPB-211ENST00000542555 INSRP06213 1382 aa11.06□□□□□ -0.64
CLPB-211ENST00000542555 CYP27B1O15528 508 aa11.06□□□□□ -0.64
CLPB-211ENST00000542555 SLURP2P0DP57 97 aa11.06□□□□□ -0.64
CLPB-211ENST00000542555 DPEP1P16444 411 aa11.06□□□□□ -0.64
CLPB-211ENST00000542555 DHX9Q08211 1270 aaKnown RBP11.06□□□□□ -0.64
CLPB-211ENST00000542555 ERFEQ4G0M1 354 aa11.06□□□□□ -0.64
CLPB-211ENST00000542555 DALRD3Q5D0E6 543 aaKnown RBP11.06□□□□□ -0.64
CLPB-211ENST00000542555 SMIM5Q71RC9 77 aa11.06□□□□□ -0.64
CLPB-211ENST00000542555 LINC00116Q8NCU8 138 aa11.06□□□□□ -0.64
CLPB-211ENST00000542555 WHAMMQ8TF30 809 aa11.06□□□□□ -0.64
CLPB-211ENST00000542555 GGNBP2Q9H3C7 697 aa11.06□□□□□ -0.64
CLPB-211ENST00000542555 RRAGCQ9HB90 399 aa11.06□□□□□ -0.64
CLPB-211ENST00000542555 RNF181Q9P0P0 153 aa11.06□□□□□ -0.64
CLPB-211ENST00000542555 LIMD1Q9UGP4 676 aa11.06□□□□□ -0.64
CLPB-211ENST00000542555 WDR90Q96KV7 1748 aa11.06□□□□□ -0.64
CLPB-211ENST00000542555 PXDNLA1KZ92 1463 aa11.06□□□□□ -0.64
CLPB-211ENST00000542555 CICQ96RK0 1608 aaPredicted RBP11.06□□□□□ -0.64
CLPB-211ENST00000542555 FLT4P35916 1363 aa11.05□□□□□ -0.64
CLPB-211ENST00000542555 TAF1LQ8IZX4 1826 aa11.05□□□□□ -0.64
CLPB-211ENST00000542555 HTRA3P83110 453 aa11.05□□□□□ -0.64
CLPB-211ENST00000542555 FOXK2Q01167 660 aa11.05□□□□□ -0.64
CLPB-211ENST00000542555 HSP90AB2PQ58FF8 381 aa11.05□□□□□ -0.64
CLPB-211ENST00000542555 IFNL2Q8IZJ0 200 aa11.05□□□□□ -0.64
CLPB-211ENST00000542555 SLC10A4Q96EP9 437 aa11.05□□□□□ -0.64
CLPB-211ENST00000542555 CDV3Q9UKY7 258 aaKnown RBP11.05□□□□□ -0.64
CLPB-211ENST00000542555 KIF24Q5T7B8 1368 aa11.04□□□□□ -0.64
CLPB-211ENST00000542555 RGPD2P0DJD1 1756 aa11.04□□□□□ -0.64
CLPB-211ENST00000542555 TRIM66O15016 1216 aa11.04□□□□□ -0.64
CLPB-211ENST00000542555 PPM1GO15355 546 aaPredicted RBP11.04□□□□□ -0.64
CLPB-211ENST00000542555 LILRB3O75022 631 aa11.04□□□□□ -0.64
CLPB-211ENST00000542555 MAP3K10Q02779 954 aa11.04□□□□□ -0.64
CLPB-211ENST00000542555 TUSC1Q2TAM9 212 aa11.04□□□□□ -0.64
CLPB-211ENST00000542555 MYSM1Q5VVJ2 828 aa11.04□□□□□ -0.64
CLPB-211ENST00000542555 ARHGAP9Q9BRR9 750 aa11.04□□□□□ -0.64
CLPB-211ENST00000542555 POLMQ9NP87 494 aaPredicted RBP11.04□□□□□ -0.64
CLPB-211ENST00000542555 FYB1O15117 783 aa11.03□□□□□ -0.64
CLPB-211ENST00000542555 ARHGEF15O94989 841 aa11.03□□□□□ -0.64
CLPB-211ENST00000542555 RELBQ01201 579 aa11.03□□□□□ -0.64
CLPB-211ENST00000542555 AMIGO3Q86WK7 504 aa11.03□□□□□ -0.64
CLPB-211ENST00000542555 KCTD15Q96SI1 283 aaPredicted RBP11.03□□□□□ -0.64
CLPB-211ENST00000542555 ASAP1Q9ULH1 1129 aa11.03□□□□□ -0.64
CLPB-211ENST00000542555 UBR3Q6ZT12 1888 aa11.03□□□□□ -0.64
CLPB-211ENST00000542555 HSPA1AP0DMV8 641 aaKnown RBP11.02□□□□□ -0.65
CLPB-211ENST00000542555 HSPA1BP0DMV9 641 aaKnown RBP11.02□□□□□ -0.65
CLPB-211ENST00000542555 ITPK1Q13572 414 aa11.02□□□□□ -0.65
CLPB-211ENST00000542555 CDCA8Q53HL2 280 aa11.02□□□□□ -0.65
CLPB-211ENST00000542555 INSM2Q96T92 566 aaPredicted RBP11.02□□□□□ -0.65
CLPB-211ENST00000542555 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
CLPB-211ENST00000542555 RPS6KA4O75676 772 aa11.01□□□□□ -0.65
CLPB-211ENST00000542555 HSP90AB1P08238 724 aaKnown RBP11.01□□□□□ -0.65
CLPB-211ENST00000542555 VEGFAP15692 232 aaPredicted RBP11.01□□□□□ -0.65
CLPB-211ENST00000542555 CTSOP43234 321 aaPredicted RBP11.01□□□□□ -0.65
CLPB-211ENST00000542555 ZBTB33Q86T24 672 aa11.01□□□□□ -0.65
CLPB-211ENST00000542555 AGBL1Q96MI9 1066 aa11.01□□□□□ -0.65
CLPB-211ENST00000542555 ZC3H4Q9UPT8 1303 aaKnown RBP11.01□□□□□ -0.65
CLPB-211ENST00000542555 TONSLQ96HA7 1378 aa11.01□□□□□ -0.65
CLPB-211ENST00000542555 KCPQ6ZWJ8 1503 aa11□□□□□ -0.65
CLPB-211ENST00000542555 GYS1P13807 737 aa11□□□□□ -0.65
CLPB-211ENST00000542555 RTL5Q5HYW3 569 aaPredicted RBP11□□□□□ -0.65
CLPB-211ENST00000542555 PDXDC2PQ6P474 469 aa11□□□□□ -0.65
CLPB-211ENST00000542555 DCAF5Q96JK2 942 aa11□□□□□ -0.65
CLPB-211ENST00000542555 ATG3Q9NT62 314 aa11□□□□□ -0.65
CLPB-211ENST00000542555 N4BP2Q86UW6 1770 aaPredicted RBP11□□□□□ -0.65
CLPB-211ENST00000542555 ITGB4P16144 1822 aa11□□□□□ -0.65
CLPB-211ENST00000542555 ST20-MTHFSA0A0A6YYL1 179 aa10.99□□□□□ -0.65
CLPB-211ENST00000542555 PHKG2P15735 406 aa10.99□□□□□ -0.65
CLPB-211ENST00000542555 ENAMQ9NRM1 1142 aa10.99□□□□□ -0.65
CLPB-211ENST00000542555 TOGARAM1Q9Y4F4 1720 aa10.98□□□□□ -0.65
CLPB-211ENST00000542555 GOLGB1Q14789 3259 aaKnown RBP10.98□□□□□ -0.65
CLPB-211ENST00000542555 ERVV-2B6SEH9 535 aa10.98□□□□□ -0.65
CLPB-211ENST00000542555 CABP4P57796 275 aa10.98□□□□□ -0.65
CLPB-211ENST00000542555 CNTNAP4Q9C0A0 1308 aa10.98□□□□□ -0.65
CLPB-211ENST00000542555 KIF13BQ9NQT8 1826 aa10.98□□□□□ -0.65
CLPB-211ENST00000542555 LMNB1P20700 586 aa10.97□□□□□ -0.65
CLPB-211ENST00000542555 AIDAQ96BJ3 306 aa10.97□□□□□ -0.65
CLPB-211ENST00000542555 ZNF395Q9H8N7 513 aaPredicted RBP10.97□□□□□ -0.65
CLPB-211ENST00000542555 TNRC6CQ9HCJ0 1690 aaKnown RBP10.97□□□□□ -0.65
CLPB-211ENST00000542555 C4AP0C0L4 1744 aa10.97□□□□□ -0.65
CLPB-211ENST00000542555 GLTPD2A6NH11 291 aa10.96□□□□□ -0.65
CLPB-211ENST00000542555 KCNA3P22001 575 aa10.96□□□□□ -0.65
CLPB-211ENST00000542555 CLK2P49760 499 aaKnown RBP10.96□□□□□ -0.65
CLPB-211ENST00000542555 SRSF11Q05519 484 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms