RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 FAM117BQ6P1L5 589 aa7.87□□□□□ -1.15
MDM2-228ENST00000542502 NCAPG2Q86XI2 1143 aa7.87□□□□□ -1.15
MDM2-228ENST00000542502 ARMC10Q8N2F6 343 aa7.87□□□□□ -1.15
MDM2-228ENST00000542502 KRTAP4-12Q9BQ66 201 aa7.87□□□□□ -1.15
MDM2-228ENST00000542502 CARD10Q9BWT7 1032 aa7.87□□□□□ -1.15
MDM2-228ENST00000542502 ELP3Q9H9T3 547 aa7.87□□□□□ -1.15
MDM2-228ENST00000542502 SMARCA4P51532 1647 aa7.86□□□□□ -1.15
MDM2-228ENST00000542502 PTPRAP18433 802 aa7.86□□□□□ -1.15
MDM2-228ENST00000542502 EPHA1P21709 976 aa7.86□□□□□ -1.15
MDM2-228ENST00000542502 KIAA1211Q6ZU35 1233 aa7.86□□□□□ -1.15
MDM2-228ENST00000542502 NUDT16Q96DE0 195 aaKnown RBP7.86□□□□□ -1.15
MDM2-228ENST00000542502 CC2D2AQ9P2K1 1620 aa7.85□□□□□ -1.15
MDM2-228ENST00000542502 SMARCA2P51531 1590 aa7.85□□□□□ -1.15
MDM2-228ENST00000542502 FAM177BA6PVY3 158 aa7.85□□□□□ -1.15
MDM2-228ENST00000542502 DUOXA2Q1HG44 320 aa7.85□□□□□ -1.15
MDM2-228ENST00000542502 FAM46AQ96IP4 442 aaKnown RBP7.85□□□□□ -1.15
MDM2-228ENST00000542502 POP1Q99575 1024 aaKnown RBP7.85□□□□□ -1.15
MDM2-228ENST00000542502 ADAM19Q9H013 955 aa7.85□□□□□ -1.15
MDM2-228ENST00000542502 SH2B1Q9NRF2 756 aaPredicted RBP7.85□□□□□ -1.15
MDM2-228ENST00000542502 TMEM63CQ9P1W3 806 aa7.85□□□□□ -1.15
MDM2-228ENST00000542502 SLAIN2Q9P270 581 aa7.85□□□□□ -1.15
MDM2-228ENST00000542502 RPLP1P05386 114 aaKnown RBP7.84□□□□□ -1.15
MDM2-228ENST00000542502 ATP2B4P23634 1241 aa7.84□□□□□ -1.15
MDM2-228ENST00000542502 MCTP1Q6DN14 999 aa7.84□□□□□ -1.15
MDM2-228ENST00000542502 ZNF438Q7Z4V0 828 aa7.84□□□□□ -1.15
MDM2-228ENST00000542502 KRTAP1-3Q8IUG1 177 aa7.84□□□□□ -1.15
MDM2-228ENST00000542502 UTP4Q969X6 686 aaKnown RBP7.84□□□□□ -1.15
MDM2-228ENST00000542502 PBXIP1Q96AQ6 731 aa7.84□□□□□ -1.15
MDM2-228ENST00000542502 SEC31BQ9NQW1 1179 aa7.84□□□□□ -1.15
MDM2-228ENST00000542502 SEPT3Q9UH03 358 aa7.84□□□□□ -1.15
MDM2-228ENST00000542502 ADAM11O75078 769 aa7.83□□□□□ -1.16
MDM2-228ENST00000542502 COBLO75128 1261 aa7.83□□□□□ -1.16
MDM2-228ENST00000542502 TGFB1P01137 390 aa7.83□□□□□ -1.16
MDM2-228ENST00000542502 ATCAYQ86WG3 371 aa7.83□□□□□ -1.16
MDM2-228ENST00000542502 FOXD4L4Q8WXT5 416 aaPredicted RBP7.83□□□□□ -1.16
MDM2-228ENST00000542502 WNT8BQ93098 351 aa7.83□□□□□ -1.16
MDM2-228ENST00000542502 KLHDC7BQ96G42 594 aa7.83□□□□□ -1.16
MDM2-228ENST00000542502 MYRFLQ96LU7 910 aa7.83□□□□□ -1.16
MDM2-228ENST00000542502 CNTN3Q9P232 1028 aa7.83□□□□□ -1.16
MDM2-228ENST00000542502 CECR2Q9BXF3 1484 aa7.82□□□□□ -1.16
MDM2-228ENST00000542502 KIAA1324LA8MWY0 1029 aaPredicted RBP7.82□□□□□ -1.16
MDM2-228ENST00000542502 H3BRJ5 948 aa7.82□□□□□ -1.16
MDM2-228ENST00000542502 DDX3YO15523 660 aaKnown RBP7.82□□□□□ -1.16
MDM2-228ENST00000542502 MED26O95402 600 aa7.82□□□□□ -1.16
MDM2-228ENST00000542502 PIP4K2BP78356 416 aa7.82□□□□□ -1.16
MDM2-228ENST00000542502 NFIAQ12857 509 aa7.82□□□□□ -1.16
MDM2-228ENST00000542502 XKR5Q6UX68 686 aa7.82□□□□□ -1.16
MDM2-228ENST00000542502 ZDHHC13Q8IUH4 622 aa7.82□□□□□ -1.16
MDM2-228ENST00000542502 PEG3Q9GZU2 1588 aa7.82□□□□□ -1.16
MDM2-228ENST00000542502 C7orf69Q9H7B7 122 aa7.82□□□□□ -1.16
MDM2-228ENST00000542502 KANSL3Q9P2N6 904 aa7.82□□□□□ -1.16
MDM2-228ENST00000542502 SALL4Q9UJQ4 1053 aa7.82□□□□□ -1.16
MDM2-228ENST00000542502 GTF3C3Q9Y5Q9 886 aa7.82□□□□□ -1.16
MDM2-228ENST00000542502 CABP4P57796 275 aa7.81□□□□□ -1.16
MDM2-228ENST00000542502 LCE3BQ5TA77 95 aa7.81□□□□□ -1.16
MDM2-228ENST00000542502 TRIM42Q8IWZ5 723 aa7.81□□□□□ -1.16
MDM2-228ENST00000542502 UBASH3BQ8TF42 649 aa7.81□□□□□ -1.16
MDM2-228ENST00000542502 NCAPD3P42695 1498 aa7.81□□□□□ -1.16
MDM2-228ENST00000542502 COL17A1Q9UMD9 1497 aaPredicted RBP7.81□□□□□ -1.16
MDM2-228ENST00000542502 NFKBIEO00221 500 aa7.8□□□□□ -1.16
MDM2-228ENST00000542502 PCSK2P16519 638 aa7.8□□□□□ -1.16
MDM2-228ENST00000542502 CES1P23141 567 aa7.8□□□□□ -1.16
MDM2-228ENST00000542502 RNF43Q68DV7 783 aa7.8□□□□□ -1.16
MDM2-228ENST00000542502 C1orf127Q8N9H9 656 aa7.8□□□□□ -1.16
MDM2-228ENST00000542502 HELQQ8TDG4 1101 aa7.8□□□□□ -1.16
MDM2-228ENST00000542502 OSGEPQ9NPF4 335 aa7.8□□□□□ -1.16
MDM2-228ENST00000542502 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.8□□□□□ -1.16
MDM2-228ENST00000542502 HMX2A2RU54 273 aa7.79□□□□□ -1.16
MDM2-228ENST00000542502 DNM1Q05193 864 aaKnown RBP7.79□□□□□ -1.16
MDM2-228ENST00000542502 ANKRD34AQ69YU3 496 aa7.79□□□□□ -1.16
MDM2-228ENST00000542502 CLEC10AQ8IUN9 316 aa7.79□□□□□ -1.16
MDM2-228ENST00000542502 FAM20CQ8IXL6 584 aa7.79□□□□□ -1.16
MDM2-228ENST00000542502 EDEM1Q92611 657 aa7.79□□□□□ -1.16
MDM2-228ENST00000542502 CCDC97Q96F63 343 aaPredicted RBP7.79□□□□□ -1.16
MDM2-228ENST00000542502 DBNDD2Q9BQY9 259 aa7.79□□□□□ -1.16
MDM2-228ENST00000542502 ZMYND15Q9H091 742 aa7.79□□□□□ -1.16
MDM2-228ENST00000542502 DZANK1Q9NVP4 752 aa7.79□□□□□ -1.16
MDM2-228ENST00000542502 HMGXB3Q12766 1538 aa7.78□□□□□ -1.16
MDM2-228ENST00000542502 PDE2AO00408 941 aaPredicted RBP7.78□□□□□ -1.16
MDM2-228ENST00000542502 SART1O43290 800 aaKnown RBP7.78□□□□□ -1.16
MDM2-228ENST00000542502 ACPPP15309 386 aa7.78□□□□□ -1.16
MDM2-228ENST00000542502 GRIK1P39086 918 aa7.78□□□□□ -1.16
MDM2-228ENST00000542502 INTS5Q6P9B9 1019 aaKnown RBP7.78□□□□□ -1.16
MDM2-228ENST00000542502 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.78□□□□□ -1.16
MDM2-228ENST00000542502 PMEPA1Q969W9 287 aa7.78□□□□□ -1.16
MDM2-228ENST00000542502 FAM83CQ9BQN1 747 aa7.78□□□□□ -1.16
MDM2-228ENST00000542502 RNF208Q9H0X6 261 aa7.78□□□□□ -1.16
MDM2-228ENST00000542502 GGNBP2Q9H3C7 697 aa7.78□□□□□ -1.16
MDM2-228ENST00000542502 ATAD2BQ9ULI0 1458 aa7.78□□□□□ -1.16
MDM2-228ENST00000542502 MROH2BQ7Z745 1585 aa7.78□□□□□ -1.16
MDM2-228ENST00000542502 PDGFAP04085 211 aa7.77□□□□□ -1.17
MDM2-228ENST00000542502 BMP3P12645 472 aa7.77□□□□□ -1.17
MDM2-228ENST00000542502 NLRP12P59046 1061 aa7.77□□□□□ -1.17
MDM2-228ENST00000542502 NOM1Q5C9Z4 860 aaKnown RBP7.77□□□□□ -1.17
MDM2-228ENST00000542502 TTC16Q8NEE8 873 aa7.77□□□□□ -1.17
MDM2-228ENST00000542502 SERPINA10Q9UK55 444 aa7.77□□□□□ -1.17
MDM2-228ENST00000542502 PRR19A6NJB7 356 aa7.76□□□□□ -1.17
MDM2-228ENST00000542502 SPINK2P20155 84 aa7.76□□□□□ -1.17
MDM2-228ENST00000542502 MZF1P28698 734 aaPredicted RBP7.76□□□□□ -1.17
MDM2-228ENST00000542502 PREPP48147 710 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms