RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 SMNDC1O75940 238 aaKnown RBP eCLIP7.39□□□□□ -1.23
C2CD3-218ENST00000542484 HOXB4P17483 251 aaPredicted RBP7.39□□□□□ -1.23
C2CD3-218ENST00000542484 AMPD1P23109 780 aa7.39□□□□□ -1.23
C2CD3-218ENST00000542484 DGKGP49619 791 aa7.39□□□□□ -1.23
C2CD3-218ENST00000542484 INSM1Q01101 510 aaPredicted RBP7.39□□□□□ -1.23
C2CD3-218ENST00000542484 PRPF40BQ6NWY9 871 aaKnown RBP7.39□□□□□ -1.23
C2CD3-218ENST00000542484 CCNJLQ8IV13 435 aa7.39□□□□□ -1.23
C2CD3-218ENST00000542484 TCF12Q99081 682 aa7.39□□□□□ -1.23
C2CD3-218ENST00000542484 JPH1Q9HDC5 661 aaPredicted RBP7.39□□□□□ -1.23
C2CD3-218ENST00000542484 PARP2Q9UGN5 583 aa7.39□□□□□ -1.23
C2CD3-218ENST00000542484 SPG7Q9UQ90 795 aa7.39□□□□□ -1.23
C2CD3-218ENST00000542484 M0R082 166 aa7.38□□□□□ -1.23
C2CD3-218ENST00000542484 PDE2AO00408 941 aaPredicted RBP7.38□□□□□ -1.23
C2CD3-218ENST00000542484 LILRB5O75023 590 aa7.38□□□□□ -1.23
C2CD3-218ENST00000542484 GADD45BO75293 160 aaPredicted RBP7.38□□□□□ -1.23
C2CD3-218ENST00000542484 DAB2P98082 770 aa7.38□□□□□ -1.23
C2CD3-218ENST00000542484 GRM2Q14416 872 aa7.38□□□□□ -1.23
C2CD3-218ENST00000542484 GRIK5Q16478 980 aa7.38□□□□□ -1.23
C2CD3-218ENST00000542484 TMC4Q7Z404 712 aa7.38□□□□□ -1.23
C2CD3-218ENST00000542484 GLIS3Q8NEA6 775 aa7.38□□□□□ -1.23
C2CD3-218ENST00000542484 NEDD1Q8NHV4 660 aa7.38□□□□□ -1.23
C2CD3-218ENST00000542484 ZNF417Q8TAU3 575 aa7.38□□□□□ -1.23
C2CD3-218ENST00000542484 NUDT8Q8WV74 236 aa7.38□□□□□ -1.23
C2CD3-218ENST00000542484 NXPE3Q969Y0 559 aa7.38□□□□□ -1.23
C2CD3-218ENST00000542484 HHIPQ96QV1 700 aa7.38□□□□□ -1.23
C2CD3-218ENST00000542484 ZNF587Q96SQ5 575 aaPredicted RBP7.38□□□□□ -1.23
C2CD3-218ENST00000542484 POP1Q99575 1024 aaKnown RBP7.38□□□□□ -1.23
C2CD3-218ENST00000542484 SRCIN1Q9C0H9 1055 aa7.38□□□□□ -1.23
C2CD3-218ENST00000542484 EHD4Q9H223 541 aa7.38□□□□□ -1.23
C2CD3-218ENST00000542484 LIN7BQ9HAP6 207 aa7.38□□□□□ -1.23
C2CD3-218ENST00000542484 TRAK1Q9UPV9 953 aa7.38□□□□□ -1.23
C2CD3-218ENST00000542484 TRPA1O75762 1119 aa7.37□□□□□ -1.23
C2CD3-218ENST00000542484 AFF1P51825 1210 aaKnown RBP7.37□□□□□ -1.23
C2CD3-218ENST00000542484 CEP135Q66GS9 1140 aa7.37□□□□□ -1.23
C2CD3-218ENST00000542484 CACTIN-AS1Q8N1I8 211 aa7.37□□□□□ -1.23
C2CD3-218ENST00000542484 BCO2Q9BYV7 579 aa7.37□□□□□ -1.23
C2CD3-218ENST00000542484 ABCB6Q9NP58 842 aa7.37□□□□□ -1.23
C2CD3-218ENST00000542484 RNF19AQ9NV58 838 aa7.37□□□□□ -1.23
C2CD3-218ENST00000542484 TRIM33Q9UPN9 1127 aa7.37□□□□□ -1.23
C2CD3-218ENST00000542484 XPCQ01831 940 aaPredicted RBP7.36□□□□□ -1.23
C2CD3-218ENST00000542484 C8orf86Q6ZUL3 223 aa7.36□□□□□ -1.23
C2CD3-218ENST00000542484 OSBPL7Q9BZF2 842 aa7.36□□□□□ -1.23
C2CD3-218ENST00000542484 ADAM19Q9H013 955 aa7.36□□□□□ -1.23
C2CD3-218ENST00000542484 C12orf49Q9H741 205 aa7.36□□□□□ -1.23
C2CD3-218ENST00000542484 NID1P14543 1247 aa7.35□□□□□ -1.23
C2CD3-218ENST00000542484 PTPRAP18433 802 aa7.35□□□□□ -1.23
C2CD3-218ENST00000542484 ITGAEP38570 1179 aa7.35□□□□□ -1.23
C2CD3-218ENST00000542484 PSMD2Q13200 908 aa7.35□□□□□ -1.23
C2CD3-218ENST00000542484 COL9A3Q14050 684 aaPredicted RBP7.35□□□□□ -1.23
C2CD3-218ENST00000542484 NXPE4Q6UWF7 544 aa7.35□□□□□ -1.23
C2CD3-218ENST00000542484 ADAMTSL4Q6UY14 1074 aa7.35□□□□□ -1.23
C2CD3-218ENST00000542484 BCL11AQ9H165 835 aa7.35□□□□□ -1.23
C2CD3-218ENST00000542484 AK5Q9Y6K8 562 aa7.35□□□□□ -1.23
C2CD3-218ENST00000542484 TMEM238LA0A1B0GVL6 79 aa7.34□□□□□ -1.23
C2CD3-218ENST00000542484 EIF4BP23588 611 aaKnown RBP7.34□□□□□ -1.23
C2CD3-218ENST00000542484 ITPKAP23677 461 aa7.34□□□□□ -1.23
C2CD3-218ENST00000542484 BAG6P46379 1132 aa7.34□□□□□ -1.23
C2CD3-218ENST00000542484 GRIA4P48058 902 aa7.34□□□□□ -1.23
C2CD3-218ENST00000542484 PTPN12Q05209 780 aaKnown RBP7.34□□□□□ -1.23
C2CD3-218ENST00000542484 MRPL58Q14197 206 aaKnown RBP7.34□□□□□ -1.23
C2CD3-218ENST00000542484 ILDR2Q71H61 639 aa7.34□□□□□ -1.23
C2CD3-218ENST00000542484 BSNDQ8WZ55 320 aa7.34□□□□□ -1.23
C2CD3-218ENST00000542484 FAM161BQ96MY7 647 aa7.34□□□□□ -1.23
C2CD3-218ENST00000542484 FAM8A1Q9UBU6 413 aa7.34□□□□□ -1.23
C2CD3-218ENST00000542484 SOX13Q9UN79 622 aa7.34□□□□□ -1.23
C2CD3-218ENST00000542484 METTL12A8MUP2 240 aa7.33□□□□□ -1.24
C2CD3-218ENST00000542484 SORBS3O60504 671 aa7.33□□□□□ -1.24
C2CD3-218ENST00000542484 XRCC5P13010 732 aaKnown RBP7.33□□□□□ -1.24
C2CD3-218ENST00000542484 SNRPNP63162 240 aaKnown RBP7.33□□□□□ -1.24
C2CD3-218ENST00000542484 MSL1Q68DK7 614 aa7.33□□□□□ -1.24
C2CD3-218ENST00000542484 GDF6Q6KF10 455 aaPredicted RBP7.33□□□□□ -1.24
C2CD3-218ENST00000542484 LINC00114Q6XXX2 140 aa7.33□□□□□ -1.24
C2CD3-218ENST00000542484 LACRTQ9GZZ8 138 aa7.33□□□□□ -1.24
C2CD3-218ENST00000542484 RRAGCQ9HB90 399 aa7.33□□□□□ -1.24
C2CD3-218ENST00000542484 PPP4R2Q9NY27 417 aa7.33□□□□□ -1.24
C2CD3-218ENST00000542484 A0A096LPE4 126 aa7.32□□□□□ -1.24
C2CD3-218ENST00000542484 A0A1W2PPZ6 126 aa7.32□□□□□ -1.24
C2CD3-218ENST00000542484 UNCXA6NJT0 531 aa7.32□□□□□ -1.24
C2CD3-218ENST00000542484 VAMP1P23763 118 aa7.32□□□□□ -1.24
C2CD3-218ENST00000542484 CDC27P30260 824 aa7.32□□□□□ -1.24
C2CD3-218ENST00000542484 GSTT1P30711 240 aa7.32□□□□□ -1.24
C2CD3-218ENST00000542484 WFDC8Q8IUA0 241 aa7.32□□□□□ -1.24
C2CD3-218ENST00000542484 C3orf58Q8NDZ4 430 aa7.32□□□□□ -1.24
C2CD3-218ENST00000542484 ASAP3Q8TDY4 903 aa7.32□□□□□ -1.24
C2CD3-218ENST00000542484 MUC3BQ9H195 1237 aa7.32□□□□□ -1.24
C2CD3-218ENST00000542484 MRS2Q9HD23 443 aa7.32□□□□□ -1.24
C2CD3-218ENST00000542484 MKL2Q9ULH7 1088 aa7.32□□□□□ -1.24
C2CD3-218ENST00000542484 FAM177BA6PVY3 158 aa7.31□□□□□ -1.24
C2CD3-218ENST00000542484 PIK3R2O00459 728 aa7.31□□□□□ -1.24
C2CD3-218ENST00000542484 GNB5O14775 395 aa7.31□□□□□ -1.24
C2CD3-218ENST00000542484 EPHA1P21709 976 aa7.31□□□□□ -1.24
C2CD3-218ENST00000542484 SPRED3Q2MJR0 410 aa7.31□□□□□ -1.24
C2CD3-218ENST00000542484 VN1R5Q7Z5H4 357 aa7.31□□□□□ -1.24
C2CD3-218ENST00000542484 IL22RA1Q8N6P7 574 aa7.31□□□□□ -1.24
C2CD3-218ENST00000542484 ANKRD24Q8TF21 1146 aa7.31□□□□□ -1.24
C2CD3-218ENST00000542484 ZNF428Q96B54 188 aa7.31□□□□□ -1.24
C2CD3-218ENST00000542484 ZNF576Q9H609 170 aa7.31□□□□□ -1.24
C2CD3-218ENST00000542484 ZFYVE1Q9HBF4 777 aa7.31□□□□□ -1.24
C2CD3-218ENST00000542484 ADAMTS8Q9UP79 889 aa7.31□□□□□ -1.24
C2CD3-218ENST00000542484 USP17L7P0C7H9 530 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms