RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 ZNF853P0CG23 659 aa11.52□□□□□ -0.57
UBC-211ENST00000542416 CTSWP56202 376 aa11.52□□□□□ -0.57
UBC-211ENST00000542416 NEXNQ0ZGT2 675 aa11.52□□□□□ -0.57
UBC-211ENST00000542416 NBPF9Q3BBW0 867 aa11.52□□□□□ -0.57
UBC-211ENST00000542416 DACT2Q5SW24 774 aa11.52□□□□□ -0.57
UBC-211ENST00000542416 APOBEC3FQ8IUX4 373 aaKnown RBP11.52□□□□□ -0.57
UBC-211ENST00000542416 PHAXQ9H814 394 aaKnown RBP11.52□□□□□ -0.57
UBC-211ENST00000542416 MINPP1Q9UNW1 487 aa11.52□□□□□ -0.57
UBC-211ENST00000542416 LEMD3Q9Y2U8 911 aa11.52□□□□□ -0.57
UBC-211ENST00000542416 LAMB2P55268 1798 aa11.51□□□□□ -0.57
UBC-211ENST00000542416 UNCXA6NJT0 531 aa11.51□□□□□ -0.57
UBC-211ENST00000542416 IGHMBP2P38935 993 aaKnown RBP11.51□□□□□ -0.57
UBC-211ENST00000542416 CCT4P50991 539 aaKnown RBP11.51□□□□□ -0.57
UBC-211ENST00000542416 INTS3Q68E01 1043 aaKnown RBP11.51□□□□□ -0.57
UBC-211ENST00000542416 MOB2Q70IA6 237 aa11.51□□□□□ -0.57
UBC-211ENST00000542416 CCDC85AQ96PX6 553 aaPredicted RBP11.51□□□□□ -0.57
UBC-211ENST00000542416 ADAMTS8Q9UP79 889 aa11.51□□□□□ -0.57
UBC-211ENST00000542416 PAPPA2Q9BXP8 1791 aa11.51□□□□□ -0.57
UBC-211ENST00000542416 MANSC4A6NHS7 340 aaPredicted RBP11.5□□□□□ -0.57
UBC-211ENST00000542416 PRAMEF18Q5VWM3 479 aa11.5□□□□□ -0.57
UBC-211ENST00000542416 TTLL5Q6EMB2 1281 aa11.5□□□□□ -0.57
UBC-211ENST00000542416 KSR2Q6VAB6 950 aa11.5□□□□□ -0.57
UBC-211ENST00000542416 TTLL11Q8NHH1 800 aa11.5□□□□□ -0.57
UBC-211ENST00000542416 FBXW7Q969H0 707 aa11.5□□□□□ -0.57
UBC-211ENST00000542416 ANKRD2Q9GZV1 360 aa11.5□□□□□ -0.57
UBC-211ENST00000542416 MAP3K2Q9Y2U5 619 aa11.5□□□□□ -0.57
UBC-211ENST00000542416 DDX60Q8IY21 1712 aaKnown RBP11.49□□□□□ -0.57
UBC-211ENST00000542416 ELL2O00472 640 aaPredicted RBP11.49□□□□□ -0.57
UBC-211ENST00000542416 PTPN12Q05209 780 aaKnown RBP11.49□□□□□ -0.57
UBC-211ENST00000542416 LDLRAD1Q5T700 205 aa11.49□□□□□ -0.57
UBC-211ENST00000542416 SPRYD7Q5W111 196 aa11.49□□□□□ -0.57
UBC-211ENST00000542416 SLC10A4Q96EP9 437 aa11.49□□□□□ -0.57
UBC-211ENST00000542416 PPP2R3BQ9Y5P8 575 aa11.49□□□□□ -0.57
UBC-211ENST00000542416 TNRC18O15417 2968 aaPredicted RBP11.48□□□□□ -0.57
UBC-211ENST00000542416 PPP1R12BO60237 982 aaPredicted RBP11.48□□□□□ -0.57
UBC-211ENST00000542416 ZBTB48P10074 688 aaPredicted RBP11.48□□□□□ -0.57
UBC-211ENST00000542416 SUPT20HL1Q3ZLR7 823 aa11.48□□□□□ -0.57
UBC-211ENST00000542416 OTUD7BQ6GQQ9 843 aa11.48□□□□□ -0.57
UBC-211ENST00000542416 JARID2Q92833 1246 aaPredicted RBP11.48□□□□□ -0.57
UBC-211ENST00000542416 MPHOSPH8Q99549 860 aa11.48□□□□□ -0.57
UBC-211ENST00000542416 STK31Q9BXU1 1019 aa11.48□□□□□ -0.57
UBC-211ENST00000542416 GREM2Q9H772 168 aa11.48□□□□□ -0.57
UBC-211ENST00000542416 ZNF804BA4D1E1 1349 aa11.47□□□□□ -0.57
UBC-211ENST00000542416 PI4KAP2A4QPH2 592 aa11.47□□□□□ -0.57
UBC-211ENST00000542416 MYO1BO43795 1136 aa11.47□□□□□ -0.57
UBC-211ENST00000542416 KCNJ4P48050 445 aa11.47□□□□□ -0.57
UBC-211ENST00000542416 MKRN3Q13064 507 aaKnown RBP11.47□□□□□ -0.57
UBC-211ENST00000542416 DLGAP5Q15398 846 aa11.47□□□□□ -0.57
UBC-211ENST00000542416 MAP3K11Q16584 847 aa11.47□□□□□ -0.57
UBC-211ENST00000542416 PI4KAP1Q8N8J0 262 aa11.47□□□□□ -0.57
UBC-211ENST00000542416 DEFB129Q9H1M3 183 aa11.47□□□□□ -0.57
UBC-211ENST00000542416 ANGEL1Q9UNK9 670 aaKnown RBP11.47□□□□□ -0.57
UBC-211ENST00000542416 SCAF8Q9UPN6 1271 aaKnown RBP11.47□□□□□ -0.57
UBC-211ENST00000542416 AKAP11Q9UKA4 1901 aa11.47□□□□□ -0.57
UBC-211ENST00000542416 COL1A1P02452 1464 aaPredicted RBP11.46□□□□□ -0.57
UBC-211ENST00000542416 APAF1O14727 1248 aa11.46□□□□□ -0.57
UBC-211ENST00000542416 SASH1O94885 1247 aa11.46□□□□□ -0.57
UBC-211ENST00000542416 IGKV5-2P06315 115 aa11.46□□□□□ -0.57
UBC-211ENST00000542416 PRKG1Q13976 671 aa11.46□□□□□ -0.57
UBC-211ENST00000542416 IFNL1Q8IU54 200 aa11.46□□□□□ -0.57
UBC-211ENST00000542416 KIAA0825Q8IV33 1275 aa11.46□□□□□ -0.57
UBC-211ENST00000542416 C8orf58Q8NAV2 365 aa11.46□□□□□ -0.57
UBC-211ENST00000542416 MTMR14Q8NCE2 650 aa11.46□□□□□ -0.57
UBC-211ENST00000542416 ERO1AQ96HE7 468 aa11.46□□□□□ -0.57
UBC-211ENST00000542416 ZBED3Q96IU2 234 aaPredicted RBP11.46□□□□□ -0.57
UBC-211ENST00000542416 MXD3Q9BW11 206 aa11.46□□□□□ -0.57
UBC-211ENST00000542416 PLA2G12BQ9BX93 195 aa11.46□□□□□ -0.57
UBC-211ENST00000542416 TAF1P21675 1872 aa11.46□□□□□ -0.58
UBC-211ENST00000542416 POLR2AP24928 1970 aaKnown RBP11.45□□□□□ -0.58
UBC-211ENST00000542416 NEURL1BA8MQ27 555 aa11.45□□□□□ -0.58
UBC-211ENST00000542416 H7C1W4 665 aa11.45□□□□□ -0.58
UBC-211ENST00000542416 ITGA6P23229 1130 aa11.45□□□□□ -0.58
UBC-211ENST00000542416 GTF2IP78347 998 aa11.45□□□□□ -0.58
UBC-211ENST00000542416 ARHGEF6Q15052 776 aa11.45□□□□□ -0.58
UBC-211ENST00000542416 MYH16Q9H6N6 1097 aa11.45□□□□□ -0.58
UBC-211ENST00000542416 TRIM17Q9Y577 477 aa11.45□□□□□ -0.58
UBC-211ENST00000542416 COL4A1P02462 1669 aa11.45□□□□□ -0.58
UBC-211ENST00000542416 SCN9AQ15858 1988 aa11.45□□□□□ -0.58
UBC-211ENST00000542416 WTIPA6NIX2 430 aaPredicted RBP11.44□□□□□ -0.58
UBC-211ENST00000542416 IREB2P48200 963 aaKnown RBP11.44□□□□□ -0.58
UBC-211ENST00000542416 DDX10Q13206 875 aaKnown RBP11.44□□□□□ -0.58
UBC-211ENST00000542416 C15orf52Q6ZUT6 534 aaKnown RBP11.44□□□□□ -0.58
UBC-211ENST00000542416 OTOP1Q7RTM1 612 aa11.44□□□□□ -0.58
UBC-211ENST00000542416 UBE3BQ7Z3V4 1068 aa11.44□□□□□ -0.58
UBC-211ENST00000542416 TXNRD3Q86VQ6 643 aa11.44□□□□□ -0.58
UBC-211ENST00000542416 CD209Q9NNX6 404 aa11.44□□□□□ -0.58
UBC-211ENST00000542416 CSF1RP07333 972 aa11.43□□□□□ -0.58
UBC-211ENST00000542416 FKBP1AP62942 108 aaKnown RBP11.43□□□□□ -0.58
UBC-211ENST00000542416 TNFAIP1Q13829 316 aa11.43□□□□□ -0.58
UBC-211ENST00000542416 CWF19L2Q2TBE0 894 aaKnown RBP11.43□□□□□ -0.58
UBC-211ENST00000542416 ZNF804AQ7Z570 1209 aa11.43□□□□□ -0.58
UBC-211ENST00000542416 WNK4Q96J92 1243 aa11.43□□□□□ -0.58
UBC-211ENST00000542416 R3HDMLQ9H3Y0 253 aa11.43□□□□□ -0.58
UBC-211ENST00000542416 ANKRD18BA2A2Z9 1011 aa11.42□□□□□ -0.58
UBC-211ENST00000542416 CHRNDQ07001 517 aa11.42□□□□□ -0.58
UBC-211ENST00000542416 GCKRQ14397 625 aa11.42□□□□□ -0.58
UBC-211ENST00000542416 HABP4Q5JVS0 413 aaKnown RBP11.42□□□□□ -0.58
UBC-211ENST00000542416 ANKRD13AQ8IZ07 590 aa11.42□□□□□ -0.58
UBC-211ENST00000542416 EFCC1Q9HA90 598 aa11.42□□□□□ -0.58
UBC-211ENST00000542416 PTPN22Q9Y2R2 807 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms