RNA–Protein interactions for RNA: ENST00000542371.1

USP5-207, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 2

Gene USP5, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-207ENST00000542371 FKBP4Q02790 459 aaKnown RBP eCLIP19.18■□□□□ 0.66
USP5-207ENST00000542371 EZH2Q15910 746 aaKnown RBP19.18■□□□□ 0.66
USP5-207ENST00000542371 SLC15A2Q16348 729 aa19.18■□□□□ 0.66
USP5-207ENST00000542371 MCMDC2Q4G0Z9 681 aa19.18■□□□□ 0.66
USP5-207ENST00000542371 ZSCAN25Q6NSZ9 544 aa19.18■□□□□ 0.66
USP5-207ENST00000542371 ERICH6Q7L0X2 663 aa19.18■□□□□ 0.66
USP5-207ENST00000542371 CCDC24Q8N4L8 307 aa19.18■□□□□ 0.66
USP5-207ENST00000542371 RPGRQ92834 1020 aaKnown RBP19.18■□□□□ 0.66
USP5-207ENST00000542371 NDUFB9Q9Y6M9 179 aa19.18■□□□□ 0.66
USP5-207ENST00000542371 CCDC171Q6TFL3 1326 aa19.18■□□□□ 0.66
USP5-207ENST00000542371 HOXA10P31260 410 aaPredicted RBP19.17■□□□□ 0.66
USP5-207ENST00000542371 MCAMP43121 646 aa19.17■□□□□ 0.66
USP5-207ENST00000542371 ZAP70P43403 619 aa19.17■□□□□ 0.66
USP5-207ENST00000542371 PHKA1P46020 1223 aa19.17■□□□□ 0.66
USP5-207ENST00000542371 EN1Q05925 392 aaPredicted RBP19.17■□□□□ 0.66
USP5-207ENST00000542371 SCARF1Q14162 830 aa19.17■□□□□ 0.66
USP5-207ENST00000542371 ZMYM1Q5SVZ6 1142 aa19.17■□□□□ 0.66
USP5-207ENST00000542371 MAP4K1Q92918 833 aa19.17■□□□□ 0.66
USP5-207ENST00000542371 RBM17Q96I25 401 aaKnown RBP19.17■□□□□ 0.66
USP5-207ENST00000542371 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.17■□□□□ 0.66
USP5-207ENST00000542371 TAF1P21675 1872 aa19.17■□□□□ 0.66
USP5-207ENST00000542371 KCNB2Q92953 911 aa19.16■□□□□ 0.66
USP5-207ENST00000542371 CRAMP1Q96RY5 1269 aa19.16■□□□□ 0.66
USP5-207ENST00000542371 BRIP1Q9BX63 1249 aa19.16■□□□□ 0.66
USP5-207ENST00000542371 GNL3LQ9NVN8 582 aaKnown RBP19.16■□□□□ 0.66
USP5-207ENST00000542371 ST18O60284 1047 aa19.15■□□□□ 0.66
USP5-207ENST00000542371 TMC4Q7Z404 712 aa19.15■□□□□ 0.66
USP5-207ENST00000542371 ANTXR1Q9H6X2 564 aa19.15■□□□□ 0.66
USP5-207ENST00000542371 PARP3Q9Y6F1 533 aa19.15■□□□□ 0.66
USP5-207ENST00000542371 ZNF804BA4D1E1 1349 aa19.15■□□□□ 0.66
USP5-207ENST00000542371 BBOX1O75936 387 aa19.14■□□□□ 0.65
USP5-207ENST00000542371 SLC4A3P48751 1232 aa19.14■□□□□ 0.65
USP5-207ENST00000542371 PTH1RQ03431 593 aa19.14■□□□□ 0.65
USP5-207ENST00000542371 CAVIN4Q5BKX8 364 aa19.14■□□□□ 0.65
USP5-207ENST00000542371 CCDC125Q86Z20 511 aa19.14■□□□□ 0.65
USP5-207ENST00000542371 SPATA5Q8NB90 893 aa19.14■□□□□ 0.65
USP5-207ENST00000542371 HMG20BQ9P0W2 317 aa19.14■□□□□ 0.65
USP5-207ENST00000542371 LEMD3Q9Y2U8 911 aa19.14■□□□□ 0.65
USP5-207ENST00000542371 EP400Q96L91 3159 aa19.13■□□□□ 0.65
USP5-207ENST00000542371 SEMA3EO15041 775 aa19.13■□□□□ 0.65
USP5-207ENST00000542371 CYP2E1P05181 493 aaPredicted RBP19.13■□□□□ 0.65
USP5-207ENST00000542371 KCNJ4P48050 445 aa19.13■□□□□ 0.65
USP5-207ENST00000542371 MCM2P49736 904 aa19.13■□□□□ 0.65
USP5-207ENST00000542371 NECTIN1Q15223 517 aa19.13■□□□□ 0.65
USP5-207ENST00000542371 PALD1Q9ULE6 856 aa19.13■□□□□ 0.65
USP5-207ENST00000542371 MYH7P12883 1935 aa19.13■□□□□ 0.65
USP5-207ENST00000542371 SNAP23O00161 211 aa19.12■□□□□ 0.65
USP5-207ENST00000542371 BCAMP50895 628 aa19.12■□□□□ 0.65
USP5-207ENST00000542371 RNF20Q5VTR2 975 aa19.12■□□□□ 0.65
USP5-207ENST00000542371 APPBP2Q92624 585 aa19.12■□□□□ 0.65
USP5-207ENST00000542371 RBM8AQ9Y5S9 174 aaKnown RBP19.12■□□□□ 0.65
USP5-207ENST00000542371 SNX14Q9Y5W7 946 aa19.12■□□□□ 0.65
USP5-207ENST00000542371 U3KPZ7 1027 aaPredicted RBP19.12■□□□□ 0.65
USP5-207ENST00000542371 PDS5AQ29RF7 1337 aaKnown RBP19.11■□□□□ 0.65
USP5-207ENST00000542371 K7ELQ4 463 aaPredicted RBP19.11■□□□□ 0.65
USP5-207ENST00000542371 MMP10P09238 476 aa19.11■□□□□ 0.65
USP5-207ENST00000542371 ZKSCAN1P17029 563 aaPredicted RBP19.11■□□□□ 0.65
USP5-207ENST00000542371 PDE6BP35913 854 aa19.11■□□□□ 0.65
USP5-207ENST00000542371 RASGRF1Q13972 1273 aa19.11■□□□□ 0.65
USP5-207ENST00000542371 UBE3CQ15386 1083 aa19.11■□□□□ 0.65
USP5-207ENST00000542371 FBXO33Q7Z6M2 555 aa19.11■□□□□ 0.65
USP5-207ENST00000542371 ZNF589Q86UQ0 364 aaPredicted RBP19.11■□□□□ 0.65
USP5-207ENST00000542371 DSCC1Q9BVC3 393 aa19.11■□□□□ 0.65
USP5-207ENST00000542371 TM6SF1Q9BZW5 370 aa19.11■□□□□ 0.65
USP5-207ENST00000542371 ANO8Q9HCE9 1232 aaPredicted RBP19.11■□□□□ 0.65
USP5-207ENST00000542371 ANKRD31Q8N7Z5 1873 aa19.1■□□□□ 0.65
USP5-207ENST00000542371 XDHP47989 1333 aa19.1■□□□□ 0.65
USP5-207ENST00000542371 DOCK2Q92608 1830 aa19.1■□□□□ 0.65
USP5-207ENST00000542371 IGSF3O75054 1194 aa19.1■□□□□ 0.65
USP5-207ENST00000542371 ADD2P35612 726 aa19.1■□□□□ 0.65
USP5-207ENST00000542371 PI16Q6UXB8 463 aa19.1■□□□□ 0.65
USP5-207ENST00000542371 C15orf52Q6ZUT6 534 aaKnown RBP19.1■□□□□ 0.65
USP5-207ENST00000542371 DENND2AQ9ULE3 1009 aa19.1■□□□□ 0.65
USP5-207ENST00000542371 MAST3O60307 1309 aa19.09■□□□□ 0.65
USP5-207ENST00000542371 NPR1P16066 1061 aa19.09■□□□□ 0.65
USP5-207ENST00000542371 MAP3K12Q12852 859 aa19.09■□□□□ 0.65
USP5-207ENST00000542371 TSGA10IPQ3SY00 556 aa19.09■□□□□ 0.65
USP5-207ENST00000542371 CREB3L3Q68CJ9 461 aa19.09■□□□□ 0.65
USP5-207ENST00000542371 FAM84BQ96KN1 310 aaPredicted RBP19.09■□□□□ 0.65
USP5-207ENST00000542371 SEC62Q99442 399 aaKnown RBP19.09■□□□□ 0.65
USP5-207ENST00000542371 PIH1D3Q9NQM4 214 aaKnown RBP19.09■□□□□ 0.65
USP5-207ENST00000542371 ATP2B4P23634 1241 aa19.08■□□□□ 0.64
USP5-207ENST00000542371 NEK4P51957 841 aa19.08■□□□□ 0.64
USP5-207ENST00000542371 PRPF40BQ6NWY9 871 aaKnown RBP19.08■□□□□ 0.64
USP5-207ENST00000542371 VPS37DQ86XT2 251 aa19.08■□□□□ 0.64
USP5-207ENST00000542371 IRS2Q9Y4H2 1338 aa19.07■□□□□ 0.64
USP5-207ENST00000542371 SLC27A2O14975 620 aa19.07■□□□□ 0.64
USP5-207ENST00000542371 ALDH1B1P30837 517 aa19.07■□□□□ 0.64
USP5-207ENST00000542371 HIBADHP31937 336 aaKnown RBP19.07■□□□□ 0.64
USP5-207ENST00000542371 GYG1P46976 350 aa19.07■□□□□ 0.64
USP5-207ENST00000542371 WASHC4Q2M389 1173 aa19.07■□□□□ 0.64
USP5-207ENST00000542371 SLC9C2Q5TAH2 1124 aa19.07■□□□□ 0.64
USP5-207ENST00000542371 TMED8Q6PL24 325 aaPredicted RBP19.07■□□□□ 0.64
USP5-207ENST00000542371 RASEFQ8IZ41 740 aa19.07■□□□□ 0.64
USP5-207ENST00000542371 OSBP2Q969R2 916 aa19.07■□□□□ 0.64
USP5-207ENST00000542371 PODXL2Q9NZ53 605 aa19.07■□□□□ 0.64
USP5-207ENST00000542371 LRRC37AA6NMS7 1700 aa19.07■□□□□ 0.64
USP5-207ENST00000542371 IDH1O75874 414 aaKnown RBP19.06■□□□□ 0.64
USP5-207ENST00000542371 CD2BP2O95400 341 aaKnown RBP19.06■□□□□ 0.64
USP5-207ENST00000542371 SRGNP10124 158 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms