RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 SNX21Q969T3 373 aa13.29□□□□□ -0.28
SCG3-202ENST00000542355 RAD50Q92878 1312 aa13.28□□□□□ -0.28
SCG3-202ENST00000542355 HSPA4P34932 840 aa13.28□□□□□ -0.28
SCG3-202ENST00000542355 PHKA1P46020 1223 aa13.28□□□□□ -0.28
SCG3-202ENST00000542355 PTH1RQ03431 593 aa13.28□□□□□ -0.28
SCG3-202ENST00000542355 MINPP1Q9UNW1 487 aa13.28□□□□□ -0.28
SCG3-202ENST00000542355 C4AP0C0L4 1744 aa13.28□□□□□ -0.28
SCG3-202ENST00000542355 CD2BP2O95400 341 aaKnown RBP13.28□□□□□ -0.28
SCG3-202ENST00000542355 MCAMP43121 646 aa13.28□□□□□ -0.28
SCG3-202ENST00000542355 SLFNL1Q499Z3 407 aa13.28□□□□□ -0.28
SCG3-202ENST00000542355 SEC62Q99442 399 aaKnown RBP13.28□□□□□ -0.28
SCG3-202ENST00000542355 SLC24A3Q9HC58 644 aa13.28□□□□□ -0.28
SCG3-202ENST00000542355 EN1Q05925 392 aaPredicted RBP13.27□□□□□ -0.28
SCG3-202ENST00000542355 DDR1Q08345 913 aa13.27□□□□□ -0.28
SCG3-202ENST00000542355 EZH2Q15910 746 aaKnown RBP13.27□□□□□ -0.28
SCG3-202ENST00000542355 ZNF589Q86UQ0 364 aaPredicted RBP13.27□□□□□ -0.28
SCG3-202ENST00000542355 ZNF512BQ96KM6 892 aaPredicted RBP13.27□□□□□ -0.28
SCG3-202ENST00000542355 UBR3Q6ZT12 1888 aa13.27□□□□□ -0.29
SCG3-202ENST00000542355 LRP5O75197 1615 aa13.27□□□□□ -0.29
SCG3-202ENST00000542355 WTIPA6NIX2 430 aaPredicted RBP13.27□□□□□ -0.29
SCG3-202ENST00000542355 ANAPC15P60006 121 aa13.27□□□□□ -0.29
SCG3-202ENST00000542355 ST5P78524 1137 aa13.27□□□□□ -0.29
SCG3-202ENST00000542355 CCDC171Q6TFL3 1326 aa13.26□□□□□ -0.29
SCG3-202ENST00000542355 COL4A1P02462 1669 aa13.26□□□□□ -0.29
SCG3-202ENST00000542355 POLRMTO00411 1230 aaKnown RBP13.26□□□□□ -0.29
SCG3-202ENST00000542355 UQCRFS1P1P0C7P4 283 aa13.26□□□□□ -0.29
SCG3-202ENST00000542355 BCAMP50895 628 aa13.26□□□□□ -0.29
SCG3-202ENST00000542355 MCMDC2Q4G0Z9 681 aa13.26□□□□□ -0.29
SCG3-202ENST00000542355 NLGN1Q8N2Q7 840 aa13.26□□□□□ -0.29
SCG3-202ENST00000542355 FLAD1Q8NFF5 587 aa13.26□□□□□ -0.29
SCG3-202ENST00000542355 RFX7Q2KHR2 1363 aa13.26□□□□□ -0.29
SCG3-202ENST00000542355 GTPBP6O43824 516 aaPredicted RBP13.25□□□□□ -0.29
SCG3-202ENST00000542355 KCNJ4P48050 445 aa13.25□□□□□ -0.29
SCG3-202ENST00000542355 COL24A1Q17RW2 1714 aa13.25□□□□□ -0.29
SCG3-202ENST00000542355 MAP4K1Q92918 833 aa13.25□□□□□ -0.29
SCG3-202ENST00000542355 AK9Q5TCS8 1911 aa13.25□□□□□ -0.29
SCG3-202ENST00000542355 LAMB2P55268 1798 aa13.25□□□□□ -0.29
SCG3-202ENST00000542355 RNF113AO15541 343 aaKnown RBP13.25□□□□□ -0.29
SCG3-202ENST00000542355 CYP2E1P05181 493 aaPredicted RBP13.25□□□□□ -0.29
SCG3-202ENST00000542355 ARID4AP29374 1257 aaPredicted RBP13.25□□□□□ -0.29
SCG3-202ENST00000542355 NEK4P51957 841 aa13.25□□□□□ -0.29
SCG3-202ENST00000542355 PRPF40BQ6NWY9 871 aaKnown RBP13.25□□□□□ -0.29
SCG3-202ENST00000542355 CCDC129Q6ZRS4 1044 aa13.25□□□□□ -0.29
SCG3-202ENST00000542355 RASEFQ8IZ41 740 aa13.25□□□□□ -0.29
SCG3-202ENST00000542355 CAMKK2Q96RR4 588 aa13.25□□□□□ -0.29
SCG3-202ENST00000542355 SLKQ9H2G2 1235 aaPredicted RBP13.25□□□□□ -0.29
SCG3-202ENST00000542355 MED23Q9ULK4 1368 aa13.25□□□□□ -0.29
SCG3-202ENST00000542355 ST18O60284 1047 aa13.24□□□□□ -0.29
SCG3-202ENST00000542355 UBE4AQ14139 1066 aa13.24□□□□□ -0.29
SCG3-202ENST00000542355 TICAM2Q86XR7 235 aa13.24□□□□□ -0.29
SCG3-202ENST00000542355 RPGRQ92834 1020 aaKnown RBP13.24□□□□□ -0.29
SCG3-202ENST00000542355 HMG20BQ9P0W2 317 aa13.24□□□□□ -0.29
SCG3-202ENST00000542355 RBM8AQ9Y5S9 174 aaKnown RBP13.24□□□□□ -0.29
SCG3-202ENST00000542355 SNX14Q9Y5W7 946 aa13.24□□□□□ -0.29
SCG3-202ENST00000542355 PNPLA7Q6ZV29 1317 aa13.24□□□□□ -0.29
SCG3-202ENST00000542355 K7ELQ4 463 aaPredicted RBP13.24□□□□□ -0.29
SCG3-202ENST00000542355 GRAPQ13588 217 aa13.24□□□□□ -0.29
SCG3-202ENST00000542355 NECTIN1Q15223 517 aa13.24□□□□□ -0.29
SCG3-202ENST00000542355 LRRFIP1Q32MZ4 808 aaKnown RBP13.24□□□□□ -0.29
SCG3-202ENST00000542355 SPATA5Q8NB90 893 aa13.24□□□□□ -0.29
SCG3-202ENST00000542355 GRAPLQ8TC17 118 aaPredicted RBP13.24□□□□□ -0.29
SCG3-202ENST00000542355 HELLSQ9NRZ9 838 aa13.24□□□□□ -0.29
SCG3-202ENST00000542355 RASGRF1Q13972 1273 aa13.23□□□□□ -0.29
SCG3-202ENST00000542355 TTF1Q15361 905 aaPredicted RBP13.23□□□□□ -0.29
SCG3-202ENST00000542355 ZMYM1Q5SVZ6 1142 aa13.23□□□□□ -0.29
SCG3-202ENST00000542355 ZC3H15Q8WU90 426 aaKnown RBP13.23□□□□□ -0.29
SCG3-202ENST00000542355 UPF3BQ9BZI7 483 aaKnown RBP13.23□□□□□ -0.29
SCG3-202ENST00000542355 GYG1P46976 350 aa13.22□□□□□ -0.29
SCG3-202ENST00000542355 SF3B2Q13435 895 aaKnown RBP13.22□□□□□ -0.29
SCG3-202ENST00000542355 CRY2Q49AN0 593 aa13.22□□□□□ -0.29
SCG3-202ENST00000542355 IL17RAQ96F46 866 aa13.22□□□□□ -0.29
SCG3-202ENST00000542355 ANKRD2Q9GZV1 360 aa13.22□□□□□ -0.29
SCG3-202ENST00000542355 ANO8Q9HCE9 1232 aaPredicted RBP13.22□□□□□ -0.29
SCG3-202ENST00000542355 IDH1O75874 414 aaKnown RBP13.22□□□□□ -0.29
SCG3-202ENST00000542355 ZFYP08048 801 aaPredicted RBP13.22□□□□□ -0.29
SCG3-202ENST00000542355 SLC15A2Q16348 729 aa13.22□□□□□ -0.29
SCG3-202ENST00000542355 WASHC4Q2M389 1173 aa13.22□□□□□ -0.29
SCG3-202ENST00000542355 CAVIN4Q5BKX8 364 aa13.22□□□□□ -0.29
SCG3-202ENST00000542355 MSL1Q68DK7 614 aa13.22□□□□□ -0.29
SCG3-202ENST00000542355 OSBP2Q969R2 916 aa13.22□□□□□ -0.29
SCG3-202ENST00000542355 PIH1D3Q9NQM4 214 aaKnown RBP13.22□□□□□ -0.29
SCG3-202ENST00000542355 ZNF219Q9P2Y4 722 aaPredicted RBP13.22□□□□□ -0.29
SCG3-202ENST00000542355 IQSEC3Q9UPP2 1182 aaPredicted RBP13.22□□□□□ -0.29
SCG3-202ENST00000542355 MMP10P09238 476 aa13.21□□□□□ -0.29
SCG3-202ENST00000542355 SLC9C2Q5TAH2 1124 aa13.21□□□□□ -0.29
SCG3-202ENST00000542355 CREB3L3Q68CJ9 461 aa13.21□□□□□ -0.29
SCG3-202ENST00000542355 VPS37DQ86XT2 251 aa13.21□□□□□ -0.29
SCG3-202ENST00000542355 RBM17Q96I25 401 aaKnown RBP13.21□□□□□ -0.29
SCG3-202ENST00000542355 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.21□□□□□ -0.29
SCG3-202ENST00000542355 ZKSCAN1P17029 563 aaPredicted RBP13.21□□□□□ -0.3
SCG3-202ENST00000542355 DEFB132Q7Z7B7 95 aa13.21□□□□□ -0.3
SCG3-202ENST00000542355 SLC51AQ86UW1 340 aa13.21□□□□□ -0.3
SCG3-202ENST00000542355 FAM84BQ96KN1 310 aaPredicted RBP13.21□□□□□ -0.3
SCG3-202ENST00000542355 STK32BQ9NY57 414 aa13.21□□□□□ -0.3
SCG3-202ENST00000542355 ANKIB1Q9P2G1 1089 aa13.21□□□□□ -0.3
SCG3-202ENST00000542355 PARP3Q9Y6F1 533 aa13.21□□□□□ -0.3
SCG3-202ENST00000542355 MAST3O60307 1309 aa13.21□□□□□ -0.3
SCG3-202ENST00000542355 TAF1P21675 1872 aa13.2□□□□□ -0.3
SCG3-202ENST00000542355 M0R2C6 588 aa13.2□□□□□ -0.3
SCG3-202ENST00000542355 SLC27A2O14975 620 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms