RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 GRM8O00222 908 aa19.84■□□□□ 0.77
VPS33A-206ENST00000542310 ALDH1L1O75891 902 aa19.84■□□□□ 0.77
VPS33A-206ENST00000542310 MAP2K2P36507 400 aa19.84■□□□□ 0.77
VPS33A-206ENST00000542310 MMP14P50281 582 aa19.84■□□□□ 0.77
VPS33A-206ENST00000542310 USP48Q86UV5 1035 aa19.84■□□□□ 0.77
VPS33A-206ENST00000542310 ZNF408Q9H9D4 720 aa19.84■□□□□ 0.77
VPS33A-206ENST00000542310 GGA3Q9NZ52 723 aa19.84■□□□□ 0.77
VPS33A-206ENST00000542310 PITPNM2Q9BZ72 1349 aa19.83■□□□□ 0.77
VPS33A-206ENST00000542310 USP17L8P0C7I0 530 aa19.83■□□□□ 0.77
VPS33A-206ENST00000542310 FOXO4P98177 505 aa19.83■□□□□ 0.77
VPS33A-206ENST00000542310 IFIT5Q13325 482 aaKnown RBP19.83■□□□□ 0.77
VPS33A-206ENST00000542310 PAPPA2Q9BXP8 1791 aa19.83■□□□□ 0.76
VPS33A-206ENST00000542310 E9PSI1 815 aa19.82■□□□□ 0.76
VPS33A-206ENST00000542310 CHRNDQ07001 517 aa19.82■□□□□ 0.76
VPS33A-206ENST00000542310 DACT2Q5SW24 774 aa19.82■□□□□ 0.76
VPS33A-206ENST00000542310 RBM26Q5T8P6 1007 aaKnown RBP19.82■□□□□ 0.76
VPS33A-206ENST00000542310 STRIP1Q5VSL9 837 aa19.82■□□□□ 0.76
VPS33A-206ENST00000542310 SULF1Q8IWU6 871 aa19.82■□□□□ 0.76
VPS33A-206ENST00000542310 MYOZ2Q9NPC6 264 aa19.82■□□□□ 0.76
VPS33A-206ENST00000542310 ECM29Q5VYK3 1845 aa19.81■□□□□ 0.76
VPS33A-206ENST00000542310 ADM5C9JUS6 153 aa19.81■□□□□ 0.76
VPS33A-206ENST00000542310 HSPA8P11142 646 aaKnown RBP19.81■□□□□ 0.76
VPS33A-206ENST00000542310 C15orf52Q6ZUT6 534 aaKnown RBP19.81■□□□□ 0.76
VPS33A-206ENST00000542310 SRCIN1Q9C0H9 1055 aa19.81■□□□□ 0.76
VPS33A-206ENST00000542310 WTIPA6NIX2 430 aaPredicted RBP19.8■□□□□ 0.76
VPS33A-206ENST00000542310 KCNJ4P48050 445 aa19.8■□□□□ 0.76
VPS33A-206ENST00000542310 BEGAINQ9BUH8 593 aa19.8■□□□□ 0.76
VPS33A-206ENST00000542310 GBA2Q9HCG7 927 aaPredicted RBP19.8■□□□□ 0.76
VPS33A-206ENST00000542310 ARAP2Q8WZ64 1704 aa19.79■□□□□ 0.76
VPS33A-206ENST00000542310 PTPRCP08575 1304 aa19.79■□□□□ 0.76
VPS33A-206ENST00000542310 IRS2Q9Y4H2 1338 aa19.79■□□□□ 0.76
VPS33A-206ENST00000542310 CA12O43570 354 aa19.79■□□□□ 0.76
VPS33A-206ENST00000542310 BRPF1P55201 1214 aaPredicted RBP19.79■□□□□ 0.76
VPS33A-206ENST00000542310 HUNKP57058 714 aa19.79■□□□□ 0.76
VPS33A-206ENST00000542310 GRM1Q13255 1194 aa19.79■□□□□ 0.76
VPS33A-206ENST00000542310 TXNRD3Q86VQ6 643 aa19.79■□□□□ 0.76
VPS33A-206ENST00000542310 C9orf78Q9NZ63 289 aaPredicted RBP19.79■□□□□ 0.76
VPS33A-206ENST00000542310 CHMP3Q9Y3E7 222 aa19.79■□□□□ 0.76
VPS33A-206ENST00000542310 UTYO14607 1347 aa19.78■□□□□ 0.76
VPS33A-206ENST00000542310 LBX1P52954 281 aa19.78■□□□□ 0.76
VPS33A-206ENST00000542310 NOGQ13253 232 aa19.78■□□□□ 0.76
VPS33A-206ENST00000542310 SCARF1Q14162 830 aa19.78■□□□□ 0.76
VPS33A-206ENST00000542310 CCDC57Q2TAC2 916 aa19.78■□□□□ 0.76
VPS33A-206ENST00000542310 ANGEL2Q5VTE6 544 aaKnown RBP19.78■□□□□ 0.76
VPS33A-206ENST00000542310 LMBR1LQ6UX01 489 aa19.78■□□□□ 0.76
VPS33A-206ENST00000542310 OGFOD1Q8N543 542 aa19.78■□□□□ 0.76
VPS33A-206ENST00000542310 C2orf69Q8N8R5 385 aa19.78■□□□□ 0.76
VPS33A-206ENST00000542310 ASTN2O75129 1339 aaPredicted RBP19.77■□□□□ 0.76
VPS33A-206ENST00000542310 AOC2O75106 756 aa19.77■□□□□ 0.76
VPS33A-206ENST00000542310 KLRK1P26718 216 aa19.77■□□□□ 0.76
VPS33A-206ENST00000542310 EPHA10Q5JZY3 1008 aa19.77■□□□□ 0.76
VPS33A-206ENST00000542310 SLC4A10Q6U841 1118 aa19.77■□□□□ 0.76
VPS33A-206ENST00000542310 MRPL50Q8N5N7 158 aaKnown RBP19.76■□□□□ 0.75
VPS33A-206ENST00000542310 FBXW7Q969H0 707 aa19.76■□□□□ 0.75
VPS33A-206ENST00000542310 CDCA5Q96FF9 252 aa19.76■□□□□ 0.75
VPS33A-206ENST00000542310 COL1A1P02452 1464 aaPredicted RBP19.75■□□□□ 0.75
VPS33A-206ENST00000542310 FKBP1BP68106 108 aa19.75■□□□□ 0.75
VPS33A-206ENST00000542310 SLFN5Q08AF3 891 aa19.75■□□□□ 0.75
VPS33A-206ENST00000542310 TAF7LQ5H9L4 462 aa19.75■□□□□ 0.75
VPS33A-206ENST00000542310 TTLL5Q6EMB2 1281 aa19.75■□□□□ 0.75
VPS33A-206ENST00000542310 RGMBQ6NW40 437 aa19.75■□□□□ 0.75
VPS33A-206ENST00000542310 DLK2Q6UY11 383 aa19.75■□□□□ 0.75
VPS33A-206ENST00000542310 CD209Q9NNX6 404 aa19.75■□□□□ 0.75
VPS33A-206ENST00000542310 AKAP11Q9UKA4 1901 aa19.74■□□□□ 0.75
VPS33A-206ENST00000542310 LDHAL6AQ6ZMR3 332 aa19.74■□□□□ 0.75
VPS33A-206ENST00000542310 ZNF804AQ7Z570 1209 aa19.74■□□□□ 0.75
VPS33A-206ENST00000542310 CCDC102AQ96A19 550 aa19.74■□□□□ 0.75
VPS33A-206ENST00000542310 HDAC9Q9UKV0 1011 aa19.74■□□□□ 0.75
VPS33A-206ENST00000542310 CCER2I3L3R5 266 aa19.73■□□□□ 0.75
VPS33A-206ENST00000542310 WNT10BO00744 389 aa19.73■□□□□ 0.75
VPS33A-206ENST00000542310 FKBP1AP62942 108 aaKnown RBP19.73■□□□□ 0.75
VPS33A-206ENST00000542310 ALDH1L2Q3SY69 923 aa19.73■□□□□ 0.75
VPS33A-206ENST00000542310 SUCLG2Q96I99 432 aa19.73■□□□□ 0.75
VPS33A-206ENST00000542310 MXD3Q9BW11 206 aa19.73■□□□□ 0.75
VPS33A-206ENST00000542310 CNNM1Q9NRU3 951 aa19.73■□□□□ 0.75
VPS33A-206ENST00000542310 FAM155AB1AL88 458 aaPredicted RBP19.72■□□□□ 0.75
VPS33A-206ENST00000542310 TAF5LO75529 589 aa19.72■□□□□ 0.75
VPS33A-206ENST00000542310 IL1R1P14778 569 aa19.72■□□□□ 0.75
VPS33A-206ENST00000542310 GTF2IP78347 998 aa19.72■□□□□ 0.75
VPS33A-206ENST00000542310 RABL6Q3YEC7 729 aaPredicted RBP19.72■□□□□ 0.75
VPS33A-206ENST00000542310 SSH1Q8WYL5 1049 aa19.72■□□□□ 0.75
VPS33A-206ENST00000542310 KAZALD1Q96I82 304 aa19.72■□□□□ 0.75
VPS33A-206ENST00000542310 SLC10A3P09131 477 aa19.71■□□□□ 0.75
VPS33A-206ENST00000542310 CT47B1P0C2W7 299 aaPredicted RBP19.71■□□□□ 0.75
VPS33A-206ENST00000542310 NBPF7P0C2Y1 421 aaPredicted RBP19.71■□□□□ 0.75
VPS33A-206ENST00000542310 NBPF9Q3BBW0 867 aa19.71■□□□□ 0.75
VPS33A-206ENST00000542310 HELBQ8NG08 1087 aaPredicted RBP19.71■□□□□ 0.75
VPS33A-206ENST00000542310 ZNF594Q96JF6 807 aaPredicted RBP19.71■□□□□ 0.75
VPS33A-206ENST00000542310 UBE4AQ14139 1066 aa19.7■□□□□ 0.74
VPS33A-206ENST00000542310 APOBEC3FQ8IUX4 373 aaKnown RBP19.7■□□□□ 0.74
VPS33A-206ENST00000542310 KIAA0825Q8IV33 1275 aa19.7■□□□□ 0.74
VPS33A-206ENST00000542310 ZBED3Q96IU2 234 aaPredicted RBP19.7■□□□□ 0.74
VPS33A-206ENST00000542310 SNAP23O00161 211 aa19.69■□□□□ 0.74
VPS33A-206ENST00000542310 ZNF157P51786 506 aaPredicted RBP19.69■□□□□ 0.74
VPS33A-206ENST00000542310 TRMT2AQ8IZ69 625 aaKnown RBP19.69■□□□□ 0.74
VPS33A-206ENST00000542310 MTMR14Q8NCE2 650 aa19.69■□□□□ 0.74
VPS33A-206ENST00000542310 BICC1Q9H694 974 aaKnown RBP19.69■□□□□ 0.74
VPS33A-206ENST00000542310 MROH5Q6ZUA9 1318 aa19.69■□□□□ 0.74
VPS33A-206ENST00000542310 CAPN15O75808 1086 aa19.68■□□□□ 0.74
VPS33A-206ENST00000542310 SASH1O94885 1247 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms