RNA–Protein interactions for RNA: ENST00000542293.5

PAAF1-211, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-211ENST00000542293 SLC10A4Q96EP9 437 aa20.63■□□□□ 0.89
PAAF1-211ENST00000542293 WNK4Q96J92 1243 aa20.63■□□□□ 0.89
PAAF1-211ENST00000542293 SASH1O94885 1247 aa20.62■□□□□ 0.89
PAAF1-211ENST00000542293 SP3Q02447 781 aa20.62■□□□□ 0.89
PAAF1-211ENST00000542293 SLC4A8Q2Y0W8 1093 aa20.62■□□□□ 0.89
PAAF1-211ENST00000542293 RTL5Q5HYW3 569 aaPredicted RBP20.62■□□□□ 0.89
PAAF1-211ENST00000542293 CLMNQ96JQ2 1002 aa20.62■□□□□ 0.89
PAAF1-211ENST00000542293 ISCA1Q9BUE6 129 aa20.62■□□□□ 0.89
PAAF1-211ENST00000542293 SEC31BQ9NQW1 1179 aa20.62■□□□□ 0.89
PAAF1-211ENST00000542293 ZBTB48P10074 688 aaPredicted RBP20.61■□□□□ 0.89
PAAF1-211ENST00000542293 PODNQ7Z5L7 613 aa20.61■□□□□ 0.89
PAAF1-211ENST00000542293 TSPYL4Q9UJ04 414 aa20.61■□□□□ 0.89
PAAF1-211ENST00000542293 PTCH2Q9Y6C5 1203 aa20.61■□□□□ 0.89
PAAF1-211ENST00000542293 MYCP01106 439 aaPredicted RBP20.6■□□□□ 0.89
PAAF1-211ENST00000542293 SLC9C1Q4G0N8 1177 aa20.6■□□□□ 0.89
PAAF1-211ENST00000542293 PRO3102Q9H379 93 aa20.6■□□□□ 0.89
PAAF1-211ENST00000542293 ATP5J2-PTCD1G3V325 749 aa20.59■□□□□ 0.89
PAAF1-211ENST00000542293 IRS4O14654 1257 aaPredicted RBP20.59■□□□□ 0.89
PAAF1-211ENST00000542293 PPP2R1AP30153 589 aa20.59■□□□□ 0.89
PAAF1-211ENST00000542293 MAP3K11Q16584 847 aa20.59■□□□□ 0.89
PAAF1-211ENST00000542293 DACT2Q5SW24 774 aa20.59■□□□□ 0.89
PAAF1-211ENST00000542293 NBPF11Q86T75 865 aa20.59■□□□□ 0.89
PAAF1-211ENST00000542293 SSC5DA1L4H1 1573 aa20.59■□□□□ 0.89
PAAF1-211ENST00000542293 WTIPA6NIX2 430 aaPredicted RBP20.58■□□□□ 0.89
PAAF1-211ENST00000542293 GJA5P36382 358 aa20.58■□□□□ 0.89
PAAF1-211ENST00000542293 NFE2L2Q16236 605 aa20.58■□□□□ 0.89
PAAF1-211ENST00000542293 APOBEC3FQ8IUX4 373 aaKnown RBP20.58■□□□□ 0.89
PAAF1-211ENST00000542293 OGFOD1Q8N543 542 aa20.58■□□□□ 0.89
PAAF1-211ENST00000542293 PTPN18Q99952 460 aa20.58■□□□□ 0.89
PAAF1-211ENST00000542293 CLSPNQ9HAW4 1339 aa20.57■□□□□ 0.88
PAAF1-211ENST00000542293 MNX1P50219 401 aaPredicted RBP20.57■□□□□ 0.88
PAAF1-211ENST00000542293 PLEKHF1Q96S99 279 aa20.57■□□□□ 0.88
PAAF1-211ENST00000542293 PLBD2Q8NHP8 589 aa20.56■□□□□ 0.88
PAAF1-211ENST00000542293 XDHP47989 1333 aa20.55■□□□□ 0.88
PAAF1-211ENST00000542293 OTUD7BQ6GQQ9 843 aa20.55■□□□□ 0.88
PAAF1-211ENST00000542293 DPF3Q92784 378 aa20.55■□□□□ 0.88
PAAF1-211ENST00000542293 ZBED3Q96IU2 234 aaPredicted RBP20.55■□□□□ 0.88
PAAF1-211ENST00000542293 ZSWIM8A7E2V4 1837 aa20.55■□□□□ 0.88
PAAF1-211ENST00000542293 TESPA1A2RU30 521 aaPredicted RBP20.54■□□□□ 0.88
PAAF1-211ENST00000542293 NEFMP07197 916 aa20.54■□□□□ 0.88
PAAF1-211ENST00000542293 ATP2B4P23634 1241 aa20.54■□□□□ 0.88
PAAF1-211ENST00000542293 SHISA4Q96DD7 197 aa20.54■□□□□ 0.88
PAAF1-211ENST00000542293 COL1A1P02452 1464 aaPredicted RBP20.54■□□□□ 0.88
PAAF1-211ENST00000542293 SOX1O00570 391 aaPredicted RBP20.53■□□□□ 0.88
PAAF1-211ENST00000542293 ANKRD13DQ6ZTN6 518 aa20.53■□□□□ 0.88
PAAF1-211ENST00000542293 SH3TC2Q8TF17 1288 aa20.53■□□□□ 0.88
PAAF1-211ENST00000542293 FBXW7Q969H0 707 aa20.53■□□□□ 0.88
PAAF1-211ENST00000542293 DEFB129Q9H1M3 183 aa20.53■□□□□ 0.88
PAAF1-211ENST00000542293 MYO3BQ8WXR4 1341 aa20.53■□□□□ 0.88
PAAF1-211ENST00000542293 STRIP1Q5VSL9 837 aa20.52■□□□□ 0.88
PAAF1-211ENST00000542293 CHPF2Q9P2E5 772 aa20.52■□□□□ 0.88
PAAF1-211ENST00000542293 MED23Q9ULK4 1368 aa20.51■□□□□ 0.87
PAAF1-211ENST00000542293 KRT24Q2M2I5 525 aa20.51■□□□□ 0.87
PAAF1-211ENST00000542293 OTOFQ9HC10 1997 aa20.5■□□□□ 0.87
PAAF1-211ENST00000542293 UNCXA6NJT0 531 aa20.5■□□□□ 0.87
PAAF1-211ENST00000542293 PPP1R12BO60237 982 aaPredicted RBP20.5■□□□□ 0.87
PAAF1-211ENST00000542293 TRIM28Q13263 835 aaKnown RBP20.5■□□□□ 0.87
PAAF1-211ENST00000542293 CNKSR2Q8WXI2 1034 aa20.5■□□□□ 0.87
PAAF1-211ENST00000542293 CCDC85AQ96PX6 553 aaPredicted RBP20.5■□□□□ 0.87
PAAF1-211ENST00000542293 ECM29Q5VYK3 1845 aa20.5■□□□□ 0.87
PAAF1-211ENST00000542293 MMP14P50281 582 aa20.49■□□□□ 0.87
PAAF1-211ENST00000542293 ARHGEF6Q15052 776 aa20.49■□□□□ 0.87
PAAF1-211ENST00000542293 KIAA0825Q8IV33 1275 aa20.49■□□□□ 0.87
PAAF1-211ENST00000542293 LRCH3Q96II8 777 aa20.49■□□□□ 0.87
PAAF1-211ENST00000542293 LAMA3Q16787 3333 aa20.48■□□□□ 0.87
PAAF1-211ENST00000542293 SPEF2Q9C093 1822 aa20.48■□□□□ 0.87
PAAF1-211ENST00000542293 CCDC152Q4G0S7 254 aa20.48■□□□□ 0.87
PAAF1-211ENST00000542293 ZBTB38Q8NAP3 1195 aaPredicted RBP20.48■□□□□ 0.87
PAAF1-211ENST00000542293 MS4A4AQ96JQ5 239 aa20.48■□□□□ 0.87
PAAF1-211ENST00000542293 ARHGAP39Q9C0H5 1083 aa20.48■□□□□ 0.87
PAAF1-211ENST00000542293 BABAM1Q9NWV8 329 aa20.48■□□□□ 0.87
PAAF1-211ENST00000542293 USP2O75604 605 aaPredicted RBP20.47■□□□□ 0.87
PAAF1-211ENST00000542293 MTFR1Q15390 333 aa20.47■□□□□ 0.87
PAAF1-211ENST00000542293 UBE2Q1Q7Z7E8 422 aa20.47■□□□□ 0.87
PAAF1-211ENST00000542293 TXNRD3Q86VQ6 643 aa20.47■□□□□ 0.87
PAAF1-211ENST00000542293 ANKRD18AQ8IVF6 992 aa20.47■□□□□ 0.87
PAAF1-211ENST00000542293 TAF1CQ15572 869 aaPredicted RBP20.46■□□□□ 0.87
PAAF1-211ENST00000542293 BRI3BPQ8WY22 251 aa20.46■□□□□ 0.87
PAAF1-211ENST00000542293 PCDHAC2Q9Y5I4 1007 aa20.46■□□□□ 0.87
PAAF1-211ENST00000542293 IREB2P48200 963 aaKnown RBP20.45■□□□□ 0.86
PAAF1-211ENST00000542293 NBPF12Q5TAG4 269 aaPredicted RBP20.45■□□□□ 0.86
PAAF1-211ENST00000542293 TTLL5Q6EMB2 1281 aa20.45■□□□□ 0.86
PAAF1-211ENST00000542293 OPTNQ96CV9 577 aa20.45■□□□□ 0.86
PAAF1-211ENST00000542293 COA1Q9GZY4 146 aa20.45■□□□□ 0.86
PAAF1-211ENST00000542293 ZFYVE28Q9HCC9 887 aa20.45■□□□□ 0.86
PAAF1-211ENST00000542293 PPP2R3BQ9Y5P8 575 aa20.45■□□□□ 0.86
PAAF1-211ENST00000542293 A0A1W2PPC1 479 aa20.44■□□□□ 0.86
PAAF1-211ENST00000542293 ZBTB7BO15156 539 aaPredicted RBP20.44■□□□□ 0.86
PAAF1-211ENST00000542293 PDE8AO60658 829 aa20.44■□□□□ 0.86
PAAF1-211ENST00000542293 ANKRD13AQ8IZ07 590 aa20.44■□□□□ 0.86
PAAF1-211ENST00000542293 JARID2Q92833 1246 aaPredicted RBP20.44■□□□□ 0.86
PAAF1-211ENST00000542293 ELP3Q9H9T3 547 aa20.44■□□□□ 0.86
PAAF1-211ENST00000542293 MINPP1Q9UNW1 487 aa20.44■□□□□ 0.86
PAAF1-211ENST00000542293 ZNF804BA4D1E1 1349 aa20.44■□□□□ 0.86
PAAF1-211ENST00000542293 CCT4P50991 539 aaKnown RBP20.43■□□□□ 0.86
PAAF1-211ENST00000542293 DLGAP5Q15398 846 aa20.43■□□□□ 0.86
PAAF1-211ENST00000542293 SUPT20HL1Q3ZLR7 823 aa20.43■□□□□ 0.86
PAAF1-211ENST00000542293 PCGF6Q9BYE7 350 aa20.43■□□□□ 0.86
PAAF1-211ENST00000542293 MAPK8IP3Q9UPT6 1336 aa20.43■□□□□ 0.86
PAAF1-211ENST00000542293 UNC80Q8N2C7 3258 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms