RNA–Protein interactions for RNA: ENST00000541960.5

GABARAPL1-210, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 3,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-210ENST00000541960 LRRC4BQ9NT99 713 aa21.13■□□□□ 0.97
GABARAPL1-210ENST00000541960 HMG20BQ9P0W2 317 aa21.13■□□□□ 0.97
GABARAPL1-210ENST00000541960 ARAP2Q8WZ64 1704 aa21.12■□□□□ 0.97
GABARAPL1-210ENST00000541960 RTCBQ9Y3I0 505 aaKnown RBP21.12■□□□□ 0.97
GABARAPL1-210ENST00000541960 CYP21A2P08686 494 aa21.12■□□□□ 0.97
GABARAPL1-210ENST00000541960 GBP4Q96PP9 640 aa21.12■□□□□ 0.97
GABARAPL1-210ENST00000541960 HSP90B1P14625 803 aaKnown RBP21.12■□□□□ 0.97
GABARAPL1-210ENST00000541960 TCEANC2Q96MN5 208 aa21.12■□□□□ 0.97
GABARAPL1-210ENST00000541960 U3KPZ7 1027 aaPredicted RBP21.12■□□□□ 0.97
GABARAPL1-210ENST00000541960 C4BP0C0L5 1744 aa21.12■□□□□ 0.97
GABARAPL1-210ENST00000541960 BCL11BQ9C0K0 894 aaPredicted RBP21.11■□□□□ 0.97
GABARAPL1-210ENST00000541960 CASZ1Q86V15 1759 aa21.11■□□□□ 0.97
GABARAPL1-210ENST00000541960 DDX11L8A8MPP1 907 aa21.11■□□□□ 0.97
GABARAPL1-210ENST00000541960 ARID4AP29374 1257 aaPredicted RBP21.11■□□□□ 0.97
GABARAPL1-210ENST00000541960 A0A0G2JLW4 131 aa21.1■□□□□ 0.97
GABARAPL1-210ENST00000541960 BAG4O95429 457 aaKnown RBP21.1■□□□□ 0.97
GABARAPL1-210ENST00000541960 IGHMBP2P38935 993 aaKnown RBP21.1■□□□□ 0.97
GABARAPL1-210ENST00000541960 HSPD1P10809 573 aaKnown RBP21.1■□□□□ 0.97
GABARAPL1-210ENST00000541960 PSMA5P28066 241 aa21.1■□□□□ 0.97
GABARAPL1-210ENST00000541960 SF3B3Q15393 1217 aaKnown RBP21.1■□□□□ 0.97
GABARAPL1-210ENST00000541960 TAF1P21675 1872 aa21.1■□□□□ 0.97
GABARAPL1-210ENST00000541960 COL24A1Q17RW2 1714 aa21.1■□□□□ 0.97
GABARAPL1-210ENST00000541960 ZPR1O75312 459 aa21.1■□□□□ 0.97
GABARAPL1-210ENST00000541960 DSCC1Q9BVC3 393 aa21.1■□□□□ 0.97
GABARAPL1-210ENST00000541960 PIH1D3Q9NQM4 214 aaKnown RBP21.1■□□□□ 0.97
GABARAPL1-210ENST00000541960 FOXP2O15409 715 aa21.09■□□□□ 0.97
GABARAPL1-210ENST00000541960 RPS6KB1P23443 525 aa21.09■□□□□ 0.97
GABARAPL1-210ENST00000541960 ST3GAL1Q11201 340 aa21.09■□□□□ 0.97
GABARAPL1-210ENST00000541960 CHRNDQ07001 517 aa21.09■□□□□ 0.97
GABARAPL1-210ENST00000541960 SLC10A5Q5PT55 438 aa21.09■□□□□ 0.97
GABARAPL1-210ENST00000541960 BLOC1S2Q6QNY1 142 aa21.09■□□□□ 0.97
GABARAPL1-210ENST00000541960 C4AP0C0L4 1744 aa21.09■□□□□ 0.97
GABARAPL1-210ENST00000541960 TRAK2O60296 914 aa21.08■□□□□ 0.97
GABARAPL1-210ENST00000541960 PHF14O94880 888 aa21.08■□□□□ 0.97
GABARAPL1-210ENST00000541960 STOX1Q6ZVD7 989 aa21.08■□□□□ 0.97
GABARAPL1-210ENST00000541960 SETDB2Q96T68 719 aa21.08■□□□□ 0.97
GABARAPL1-210ENST00000541960 PUS7LQ9H0K6 701 aaKnown RBP21.08■□□□□ 0.97
GABARAPL1-210ENST00000541960 SLC5A1P13866 664 aa21.08■□□□□ 0.97
GABARAPL1-210ENST00000541960 FAM196AQ6ZSG2 479 aa21.08■□□□□ 0.97
GABARAPL1-210ENST00000541960 CCDC24Q8N4L8 307 aa21.08■□□□□ 0.97
GABARAPL1-210ENST00000541960 TPCN1Q9ULQ1 816 aa21.08■□□□□ 0.97
GABARAPL1-210ENST00000541960 ME3Q16798 604 aa21.08■□□□□ 0.96
GABARAPL1-210ENST00000541960 CHAMP1Q96JM3 812 aa21.08■□□□□ 0.96
GABARAPL1-210ENST00000541960 MYO5AQ9Y4I1 1855 aaKnown RBP21.07■□□□□ 0.96
GABARAPL1-210ENST00000541960 DTNBO60941 627 aa21.07■□□□□ 0.96
GABARAPL1-210ENST00000541960 ZFYP08048 801 aaPredicted RBP21.07■□□□□ 0.96
GABARAPL1-210ENST00000541960 WASHC4Q2M389 1173 aa21.07■□□□□ 0.96
GABARAPL1-210ENST00000541960 BRWD3Q6RI45 1802 aa21.07■□□□□ 0.96
GABARAPL1-210ENST00000541960 WTIPA6NIX2 430 aaPredicted RBP21.07■□□□□ 0.96
GABARAPL1-210ENST00000541960 TOB2Q14106 344 aaPredicted RBP21.07■□□□□ 0.96
GABARAPL1-210ENST00000541960 FOXD4L5Q5VV16 416 aaPredicted RBP21.06■□□□□ 0.96
GABARAPL1-210ENST00000541960 FOXD4L4Q8WXT5 416 aaPredicted RBP21.06■□□□□ 0.96
GABARAPL1-210ENST00000541960 CDC5LQ99459 802 aaKnown RBP21.06■□□□□ 0.96
GABARAPL1-210ENST00000541960 MYH7P12883 1935 aa21.06■□□□□ 0.96
GABARAPL1-210ENST00000541960 BRD1O95696 1058 aa21.06■□□□□ 0.96
GABARAPL1-210ENST00000541960 GTF2E1P29083 439 aaPredicted RBP21.06■□□□□ 0.96
GABARAPL1-210ENST00000541960 RASGRF1Q13972 1273 aa21.06■□□□□ 0.96
GABARAPL1-210ENST00000541960 NBPF5PQ86XG9 351 aaPredicted RBP21.06■□□□□ 0.96
GABARAPL1-210ENST00000541960 APPBP2Q92624 585 aa21.06■□□□□ 0.96
GABARAPL1-210ENST00000541960 UQCRFS1P1P0C7P4 283 aa21.06■□□□□ 0.96
GABARAPL1-210ENST00000541960 KRT32Q14532 448 aa21.05■□□□□ 0.96
GABARAPL1-210ENST00000541960 CCDC83Q8IWF9 413 aa21.05■□□□□ 0.96
GABARAPL1-210ENST00000541960 CELF1Q92879 486 aaKnown RBP21.05■□□□□ 0.96
GABARAPL1-210ENST00000541960 ADD2P35612 726 aa21.05■□□□□ 0.96
GABARAPL1-210ENST00000541960 BCAMP50895 628 aa21.05■□□□□ 0.96
GABARAPL1-210ENST00000541960 LRRFIP1Q32MZ4 808 aaKnown RBP21.05■□□□□ 0.96
GABARAPL1-210ENST00000541960 TTLL5Q6EMB2 1281 aa21.05■□□□□ 0.96
GABARAPL1-210ENST00000541960 NEK1Q96PY6 1258 aa21.05■□□□□ 0.96
GABARAPL1-210ENST00000541960 ALDH8A1Q9H2A2 487 aaPredicted RBP21.05■□□□□ 0.96
GABARAPL1-210ENST00000541960 ANKRD18AQ8IVF6 992 aa21.04■□□□□ 0.96
GABARAPL1-210ENST00000541960 NYXQ9GZU5 481 aa21.04■□□□□ 0.96
GABARAPL1-210ENST00000541960 TRAPPC3LQ5T215 181 aa21.04■□□□□ 0.96
GABARAPL1-210ENST00000541960 NECAB1Q8N987 351 aa21.04■□□□□ 0.96
GABARAPL1-210ENST00000541960 SPATA5Q8NB90 893 aa21.04■□□□□ 0.96
GABARAPL1-210ENST00000541960 KRT27Q7Z3Y8 459 aa21.04■□□□□ 0.96
GABARAPL1-210ENST00000541960 A0A1B0GUL6 1792 aa21.03■□□□□ 0.96
GABARAPL1-210ENST00000541960 RFC4P35249 363 aa21.03■□□□□ 0.96
GABARAPL1-210ENST00000541960 SLC9C2Q5TAH2 1124 aa21.03■□□□□ 0.96
GABARAPL1-210ENST00000541960 ZSCAN31Q96LW9 406 aaPredicted RBP21.03■□□□□ 0.96
GABARAPL1-210ENST00000541960 SH2B1Q9NRF2 756 aaPredicted RBP21.03■□□□□ 0.96
GABARAPL1-210ENST00000541960 WWC3Q9ULE0 1092 aa21.03■□□□□ 0.96
GABARAPL1-210ENST00000541960 IDH1O75874 414 aaKnown RBP21.03■□□□□ 0.96
GABARAPL1-210ENST00000541960 TTF1Q15361 905 aaPredicted RBP21.03■□□□□ 0.96
GABARAPL1-210ENST00000541960 BSDC1Q9NW68 430 aaPredicted RBP21.03■□□□□ 0.96
GABARAPL1-210ENST00000541960 TRIM37O94972 964 aa21.02■□□□□ 0.96
GABARAPL1-210ENST00000541960 MCTP1Q6DN14 999 aa21.02■□□□□ 0.96
GABARAPL1-210ENST00000541960 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.02■□□□□ 0.96
GABARAPL1-210ENST00000541960 GPAA1O43292 621 aa21.02■□□□□ 0.95
GABARAPL1-210ENST00000541960 MINPP1Q9UNW1 487 aa21.02■□□□□ 0.95
GABARAPL1-210ENST00000541960 TCRBV5S4A2TA0A5A2 114 aa21.01■□□□□ 0.95
GABARAPL1-210ENST00000541960 GZF1Q9H116 711 aaPredicted RBP21.01■□□□□ 0.95
GABARAPL1-210ENST00000541960 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.01■□□□□ 0.95
GABARAPL1-210ENST00000541960 LAMA4Q16363 1823 aa21.01■□□□□ 0.95
GABARAPL1-210ENST00000541960 PDE6AP16499 860 aa21.01■□□□□ 0.95
GABARAPL1-210ENST00000541960 TPTE2Q6XPS3 522 aa21.01■□□□□ 0.95
GABARAPL1-210ENST00000541960 NLRP3Q96P20 1036 aa21■□□□□ 0.95
GABARAPL1-210ENST00000541960 ZNF532Q9HCE3 1301 aa21■□□□□ 0.95
GABARAPL1-210ENST00000541960 TNRC6CQ9HCJ0 1690 aaKnown RBP21■□□□□ 0.95
GABARAPL1-210ENST00000541960 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21■□□□□ 0.95
GABARAPL1-210ENST00000541960 NFIXQ14938 502 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms