RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 SLC16A10Q8TF71 515 aa10.07□□□□□ -0.8
FNDC3A-206ENST00000541916 UBA5Q9GZZ9 404 aa10.07□□□□□ -0.8
FNDC3A-206ENST00000541916 SPATA31A1Q5TZJ5 1347 aa10.07□□□□□ -0.8
FNDC3A-206ENST00000541916 CCNA1P78396 465 aa10.07□□□□□ -0.8
FNDC3A-206ENST00000541916 SLC15A2Q16348 729 aa10.07□□□□□ -0.8
FNDC3A-206ENST00000541916 TAF12Q16514 161 aa10.07□□□□□ -0.8
FNDC3A-206ENST00000541916 CCDC150Q8NCX0 1101 aa10.07□□□□□ -0.8
FNDC3A-206ENST00000541916 C22orf23Q9BZE7 217 aa10.07□□□□□ -0.8
FNDC3A-206ENST00000541916 GCC2Q8IWJ2 1684 aa10.07□□□□□ -0.8
FNDC3A-206ENST00000541916 SPDYE3A6NKU9 549 aa10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 HMGB1P09429 215 aaKnown RBP10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 GRIPAP1Q4V328 841 aa10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 CEP131Q9UPN4 1083 aa10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 GLI2P10070 1586 aa10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 A0A0G2JLW4 131 aa10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 CCDC144CPQ8IYA2 1237 aa10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 TNPO1Q92973 898 aaKnown RBP10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 ZNF594Q96JF6 807 aaPredicted RBP10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 DDX49Q9Y6V7 483 aaKnown RBP10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 BLMP54132 1417 aaPredicted RBP10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 EYA2O00167 538 aa10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 WTAPQ15007 396 aa10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 CCDC184Q52MB2 194 aa10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 PLXNC1O60486 1568 aa10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 CDC42BPGQ6DT37 1551 aa10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 PTPDC1A2A3K4 754 aa10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 NOP56O00567 594 aaKnown RBP10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 NCOA7Q8NI08 942 aa10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 PAG1Q9NWQ8 432 aa10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 USP16Q9Y5T5 823 aa10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 PRDM15P57071 1507 aaPredicted RBP10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 PRR36Q9H6K5 1346 aa10.06□□□□□ -0.8
FNDC3A-206ENST00000541916 GCKRQ14397 625 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 DHX8Q14562 1220 aaKnown RBP10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 RHPN1Q8TCX5 695 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 LPIN2Q92539 896 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 BICD1Q96G01 975 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 CNNM2Q9H8M5 875 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 M0QZ92 97 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 BACH1O14867 736 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 GNAQP50148 359 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 TTLL7Q6ZT98 887 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 DPP9Q86TI2 863 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 CPXCR1Q8N123 301 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 SYNE4Q8N205 404 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 MCM2P49736 904 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 SASS6Q6UVJ0 657 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 TESK2Q96S53 571 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 AATFQ9NY61 560 aaKnown RBP eCLIP10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 CASTP20810 708 aaKnown RBP10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 HACL1Q9UJ83 578 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 HOXD10P28358 340 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 HEATR3Q7Z4Q2 680 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 MTFR1LQ9H019 292 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 ADGRB3O60242 1522 aa10.05□□□□□ -0.8
FNDC3A-206ENST00000541916 ZNF277Q9NRM2 450 aaPredicted RBP10.04□□□□□ -0.8
FNDC3A-206ENST00000541916 CCDC39Q9UFE4 941 aa10.04□□□□□ -0.8
FNDC3A-206ENST00000541916 SPATA31A5Q5VU36 1347 aa10.04□□□□□ -0.8
FNDC3A-206ENST00000541916 SPATA31A7Q8IWB4 1347 aa10.04□□□□□ -0.8
FNDC3A-206ENST00000541916 SHROOM2Q13796 1616 aa10.04□□□□□ -0.8
FNDC3A-206ENST00000541916 EIF4A1P60842 406 aaKnown RBP10.04□□□□□ -0.8
FNDC3A-206ENST00000541916 TBC1D10BQ4KMP7 808 aaPredicted RBP10.04□□□□□ -0.8
FNDC3A-206ENST00000541916 NCAPG2Q86XI2 1143 aa10.04□□□□□ -0.8
FNDC3A-206ENST00000541916 BARGINQ6ZT62 677 aa10.04□□□□□ -0.8
FNDC3A-206ENST00000541916 ARHGEF1Q92888 912 aaKnown RBP10.04□□□□□ -0.8
FNDC3A-206ENST00000541916 RRP36Q96EU6 259 aaKnown RBP10.04□□□□□ -0.8
FNDC3A-206ENST00000541916 MAPKAPK5Q8IW41 473 aa10.04□□□□□ -0.8
FNDC3A-206ENST00000541916 MEIS3Q99687 375 aa10.04□□□□□ -0.8
FNDC3A-206ENST00000541916 HOMER2Q9NSB8 354 aa10.04□□□□□ -0.8
FNDC3A-206ENST00000541916 ANGEL1Q9UNK9 670 aaKnown RBP10.04□□□□□ -0.8
FNDC3A-206ENST00000541916 ZBTB38Q8NAP3 1195 aaPredicted RBP10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 LEMD3Q9Y2U8 911 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 ZNF804BA4D1E1 1349 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 TRIM27P14373 513 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 BMS1Q14692 1282 aaKnown RBP10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 DHX37Q8IY37 1157 aaKnown RBP10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 ARID3AQ99856 593 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 CEP170BQ9Y4F5 1589 aaPredicted RBP10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 USP17L3A6NCW0 530 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 USP17L4A6NCW7 530 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 CALM1P0DP23 149 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 CALM2P0DP24 149 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 CALM3P0DP25 149 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 USP17L1Q7RTZ2 530 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 NARFQ9UHQ1 456 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 AATKQ6ZMQ8 1374 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 KRT26Q7Z3Y9 468 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 CEP57L1Q8IYX8 460 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 TGFBRAP1Q8WUH2 860 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 ZSCAN31Q96LW9 406 aaPredicted RBP10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 ERBB4Q15303 1308 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 NSMFQ6X4W1 530 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 MICU3Q86XE3 530 aa10.03□□□□□ -0.8
FNDC3A-206ENST00000541916 KCNQ3O43525 872 aa10.02□□□□□ -0.8
FNDC3A-206ENST00000541916 NAPAP54920 295 aa10.02□□□□□ -0.8
FNDC3A-206ENST00000541916 GPCPD1Q9NPB8 672 aa10.02□□□□□ -0.8
FNDC3A-206ENST00000541916 A0A1B0GUL7 405 aa10.02□□□□□ -0.8
FNDC3A-206ENST00000541916 ERMNQ8TAM6 284 aa10.02□□□□□ -0.8
FNDC3A-206ENST00000541916 C6orf50Q9HD87 102 aa10.02□□□□□ -0.8
FNDC3A-206ENST00000541916 FBXO3Q9UK99 471 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms