RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 BIRC2Q13490 618 aa12.14□□□□□ -0.47
GABRB3-204ENST00000541819 NAP1L4Q99733 375 aaKnown RBP12.14□□□□□ -0.47
GABRB3-204ENST00000541819 ATP6V1AP38606 617 aa12.14□□□□□ -0.47
GABRB3-204ENST00000541819 JDP2Q8WYK2 163 aa12.14□□□□□ -0.47
GABRB3-204ENST00000541819 GOLGA1Q92805 767 aa12.14□□□□□ -0.47
GABRB3-204ENST00000541819 ZBTB21Q9ULJ3 1066 aa12.14□□□□□ -0.47
GABRB3-204ENST00000541819 KRT86O43790 486 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 PTGS1P23219 599 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 CALML3P27482 149 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 RASA3Q14644 834 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 SETDB1Q15047 1291 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 AKNAD1Q5T1N1 836 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 RNF34Q969K3 372 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 SEL1L2Q5TEA6 688 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 SEC62Q99442 399 aaKnown RBP12.13□□□□□ -0.47
GABRB3-204ENST00000541819 MTUS1Q9ULD2 1270 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 PARP3Q9Y6F1 533 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 BACH1O14867 736 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 KRT2P35908 639 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 TNNI2P48788 182 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 MRPS27Q92552 414 aaKnown RBP12.13□□□□□ -0.47
GABRB3-204ENST00000541819 AMOTL2Q9Y2J4 779 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 CIB2O75838 187 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 ATP2B3Q16720 1220 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 INF2Q27J81 1249 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 STIM2Q9P246 746 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 NOD1Q9Y239 953 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 PPFIA3O75145 1194 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 GABPB2Q8TAK5 448 aaPredicted RBP12.13□□□□□ -0.47
GABRB3-204ENST00000541819 BRF1Q92994 677 aa12.13□□□□□ -0.47
GABRB3-204ENST00000541819 DHX29Q7Z478 1369 aaKnown RBP12.12□□□□□ -0.47
GABRB3-204ENST00000541819 ARFGAP3Q9NP61 516 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 EMILIN1Q9Y6C2 1016 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 GNAT2P19087 354 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 ERCC6LQ2NKX8 1250 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 RBM26Q5T8P6 1007 aaKnown RBP12.12□□□□□ -0.47
GABRB3-204ENST00000541819 ANKRD24Q8TF21 1146 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 KIFC2Q96AC6 838 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 SIRT1Q96EB6 747 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 CACYBPQ9HB71 228 aaKnown RBP12.12□□□□□ -0.47
GABRB3-204ENST00000541819 KCNK9Q9NPC2 374 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 E7EVH7 732 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 WDR44Q5JSH3 913 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 FAM204AQ9H8W3 233 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 FAM184BQ9ULE4 1060 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 ZSCAN22P10073 491 aaPredicted RBP12.12□□□□□ -0.47
GABRB3-204ENST00000541819 SATB1Q01826 763 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 CEP128Q6ZU80 1094 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 DHX58Q96C10 678 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 PPP1R9BQ96SB3 815 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 AGTPBP1Q9UPW5 1226 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 SMIM23A6NLE4 172 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 CCDC42Q96M95 316 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 EYA3Q99504 573 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 CSRNP2Q9H175 543 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 SH2D4AQ9H788 454 aa12.12□□□□□ -0.47
GABRB3-204ENST00000541819 CALCOCO2Q13137 446 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 ANKRD13DQ6ZTN6 518 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 VPS52Q8N1B4 723 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 PROCA1Q8NCQ7 364 aaPredicted RBP12.11□□□□□ -0.47
GABRB3-204ENST00000541819 KIFAP3Q92845 792 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 ZFP91Q96JP5 570 aaPredicted RBP12.11□□□□□ -0.47
GABRB3-204ENST00000541819 WASLO00401 505 aaPredicted RBP12.11□□□□□ -0.47
GABRB3-204ENST00000541819 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
GABRB3-204ENST00000541819 CCDC65Q8IXS2 484 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 TSGA10Q9BZW7 698 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 SAMD15Q9P1V8 674 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.11□□□□□ -0.47
GABRB3-204ENST00000541819 TRIM75PA6NK02 468 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 STX10O60499 249 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 LPXNO60711 386 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 NBPF8Q3BBV2 869 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 BRDTQ58F21 947 aaPredicted RBP12.11□□□□□ -0.47
GABRB3-204ENST00000541819 AFAP1L2Q8N4X5 818 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 PRIMPOLQ96LW4 560 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 RSPH14Q9UHP6 348 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 ATP5DP30049 168 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 CUL4BQ13620 913 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 TTC22Q5TAA0 569 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 NBPF14Q5TI25 921 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 CCDC25Q86WR0 208 aa12.11□□□□□ -0.47
GABRB3-204ENST00000541819 KRT5P13647 590 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 TNNC1P63316 161 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 CLUL1Q15846 466 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 FRMD4BQ9Y2L6 1034 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 FAM135AQ9P2D6 1515 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 STK10O94804 968 aaKnown RBP12.1□□□□□ -0.47
GABRB3-204ENST00000541819 UBXN1Q04323 297 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 ANO6Q4KMQ2 910 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 PPP1R21Q6ZMI0 780 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 TBC1D9Q6ZT07 1266 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 FNBP1Q96RU3 617 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 DNAI1Q9UI46 699 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 PI4KAP2A4QPH2 592 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 TUBB4AP04350 444 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 RPL13P26373 211 aaKnown RBP12.1□□□□□ -0.47
GABRB3-204ENST00000541819 GNA11P29992 359 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 MCMDC2Q4G0Z9 681 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 KRT222Q8N1A0 295 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 PI4KAP1Q8N8J0 262 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms