RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 METTL14Q9HCE5 456 aaKnown RBP5.97□□□□□ -1.45
SNHG1-218ENST00000541615 QPCTLQ9NXS2 382 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 ADAM21Q9UKJ8 722 aa5.97□□□□□ -1.45
SNHG1-218ENST00000541615 TPX2Q9ULW0 747 aaKnown RBP5.97□□□□□ -1.45
SNHG1-218ENST00000541615 TMEM232C9JQI7 657 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 SH3BP5O60239 455 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 STK10O94804 968 aaKnown RBP5.96□□□□□ -1.46
SNHG1-218ENST00000541615 ITGBL1O95965 494 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-218ENST00000541615 COL9A1P20849 921 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 ARHGAP25P42331 645 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 CCNHP51946 323 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-218ENST00000541615 CLNS1AP54105 237 aaKnown RBP5.96□□□□□ -1.46
SNHG1-218ENST00000541615 IFFO1Q0D2I5 559 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 DCTN1Q14203 1278 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 TPD52L1Q16890 204 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-218ENST00000541615 PROX2Q3B8N5 592 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 CCDC158Q5M9N0 1113 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 NUGGCQ68CJ6 796 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 SLC30A9Q6PML9 568 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 LRRC31Q6UY01 552 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 NYAP1Q6ZVC0 841 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 B4GALNT4Q76KP1 1039 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 ARHGAP22Q7Z5H3 698 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 CEP57Q86XR8 500 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 AFAP1Q8N556 730 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 MIGA1Q8NAN2 632 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 ZNF280CQ8ND82 737 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 DDX12PQ92771 950 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 HOOK2Q96ED9 719 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 CDK5RAP3Q96JB5 506 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 CCDC114Q96M63 670 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 SCLT1Q96NL6 688 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 EPAS1Q99814 870 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 JPH2Q9BR39 696 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-218ENST00000541615 ATP6V0A4Q9HBG4 840 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 SLC24A3Q9HC58 644 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 GMEB1Q9Y692 573 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 COMMD10Q9Y6G5 202 aa5.96□□□□□ -1.46
SNHG1-218ENST00000541615 MYBBP1AQ9BQG0 1328 aaKnown RBP5.96□□□□□ -1.46
SNHG1-218ENST00000541615 ERICH2A1L162 156 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 FAM177BA6PVY3 158 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 EBAG9O00559 213 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 PPFIA3O75145 1194 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 AP1G2O75843 785 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 KIF4AO95239 1232 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 CAVIN2O95810 425 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 MYL1P05976 194 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 VIL1P09327 827 aaKnown RBP5.95□□□□□ -1.46
SNHG1-218ENST00000541615 IDO1P14902 403 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 XBP1P17861 261 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 TRIM21P19474 475 aaKnown RBP5.95□□□□□ -1.46
SNHG1-218ENST00000541615 OAS2P29728 719 aaKnown RBP5.95□□□□□ -1.46
SNHG1-218ENST00000541615 LMNB2Q03252 620 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 PTPN14Q15678 1187 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 C20orf194Q5TEA3 1177 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 MCTP1Q6DN14 999 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 ISM2Q6H9L7 571 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 RSPH3Q86UC2 560 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 LUZP1Q86V48 1076 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 STAG2Q8N3U4 1231 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 C3orf20Q8ND61 904 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 B4GALNT2Q8NHY0 566 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 NUP133Q8WUM0 1156 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 UBXN4Q92575 508 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 GTF3C6Q969F1 213 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 ANKRD27Q96NW4 1050 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 TTC12Q9H892 705 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-218ENST00000541615 ARFGAP3Q9NP61 516 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 IFT57Q9NWB7 429 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 LMCD1Q9NZU5 365 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 TMEM98Q9Y2Y6 226 aa5.95□□□□□ -1.46
SNHG1-218ENST00000541615 GPRASP1Q5JY77 1395 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 KIF15Q9NS87 1388 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 SYCE3A1L190 88 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 SOWAHBA6NEL2 793 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 ENO4A6NNW6 628 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 SRGAP3O43295 1099 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 FOSL1P15407 271 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 DESP17661 470 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 MCM3P25205 808 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 INPP5BP32019 993 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 NEK2P51955 445 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 POU5F1Q01860 360 aaKnown RBP5.94□□□□□ -1.46
SNHG1-218ENST00000541615 PABPC4Q13310 644 aaKnown RBP eCLIP5.94□□□□□ -1.46
SNHG1-218ENST00000541615 DRP2Q13474 957 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 CLPPQ16740 277 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-218ENST00000541615 CCDC152Q4G0S7 254 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 ZNF394Q53GI3 561 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 SH2D4BQ5SQS7 431 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 SFMBT2Q5VUG0 894 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 CDCA2Q69YH5 1023 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-218ENST00000541615 CWF19L1Q69YN2 538 aaKnown RBP5.94□□□□□ -1.46
SNHG1-218ENST00000541615 CLEC4GQ6UXB4 293 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 ELOA2Q8IYF1 753 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-218ENST00000541615 ATP11CQ8NB49 1132 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 SPRYD3Q8NCJ5 442 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 PHC3Q8NDX5 983 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 USP33Q8TEY7 942 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 ARHGAP45Q92619 1136 aa5.94□□□□□ -1.46
SNHG1-218ENST00000541615 JARID2Q92833 1246 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms