RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 PDE4AP27815 886 aa10.23□□□□□ -0.77
LMO3-226ENST00000541589 LMOD1P29536 600 aaPredicted RBP10.23□□□□□ -0.77
LMO3-226ENST00000541589 EIF6P56537 245 aaKnown RBP10.23□□□□□ -0.77
LMO3-226ENST00000541589 CCDC30Q5VVM6 783 aa10.23□□□□□ -0.77
LMO3-226ENST00000541589 ZNF790Q6PG37 636 aa10.23□□□□□ -0.77
LMO3-226ENST00000541589 NBPF5PQ86XG9 351 aaPredicted RBP10.23□□□□□ -0.77
LMO3-226ENST00000541589 TTC5Q8N0Z6 440 aa10.23□□□□□ -0.77
LMO3-226ENST00000541589 JDP2Q8WYK2 163 aa10.23□□□□□ -0.77
LMO3-226ENST00000541589 CHMP4AQ9BY43 222 aa10.23□□□□□ -0.77
LMO3-226ENST00000541589 ZNF330Q9Y3S2 320 aaPredicted RBP10.23□□□□□ -0.77
LMO3-226ENST00000541589 GJA3Q9Y6H8 435 aa10.23□□□□□ -0.77
LMO3-226ENST00000541589 BCORQ6W2J9 1755 aa10.23□□□□□ -0.77
LMO3-226ENST00000541589 ZBTB7BO15156 539 aaPredicted RBP10.23□□□□□ -0.77
LMO3-226ENST00000541589 HOXB7P09629 217 aa10.23□□□□□ -0.77
LMO3-226ENST00000541589 NUDT7P0C024 238 aa10.23□□□□□ -0.77
LMO3-226ENST00000541589 SOX10P56693 466 aa10.23□□□□□ -0.77
LMO3-226ENST00000541589 HDAC1Q13547 482 aaPredicted RBP10.23□□□□□ -0.77
LMO3-226ENST00000541589 CIAPIN1Q6FI81 312 aa10.23□□□□□ -0.77
LMO3-226ENST00000541589 DZIP3Q86Y13 1208 aaKnown RBP10.23□□□□□ -0.77
LMO3-226ENST00000541589 STK31Q9BXU1 1019 aa10.23□□□□□ -0.77
LMO3-226ENST00000541589 BTBD11A6QL63 1104 aa10.22□□□□□ -0.77
LMO3-226ENST00000541589 CELF2O95319 508 aaKnown RBP10.22□□□□□ -0.77
LMO3-226ENST00000541589 ALDH1B1P30837 517 aa10.22□□□□□ -0.77
LMO3-226ENST00000541589 EIF4A1P60842 406 aaKnown RBP10.22□□□□□ -0.77
LMO3-226ENST00000541589 INTS3Q68E01 1043 aaKnown RBP10.22□□□□□ -0.77
LMO3-226ENST00000541589 ZIC5Q96T25 663 aa10.22□□□□□ -0.77
LMO3-226ENST00000541589 PGAP2Q9UHJ9 254 aa10.22□□□□□ -0.77
LMO3-226ENST00000541589 CRY2Q49AN0 593 aa10.21□□□□□ -0.78
LMO3-226ENST00000541589 PPP1R15BQ5SWA1 713 aa10.21□□□□□ -0.78
LMO3-226ENST00000541589 CC2D2BQ6DHV5 1058 aa10.21□□□□□ -0.78
LMO3-226ENST00000541589 TPTE2Q6XPS3 522 aa10.21□□□□□ -0.78
LMO3-226ENST00000541589 RNF166Q96A37 237 aaPredicted RBP10.21□□□□□ -0.78
LMO3-226ENST00000541589 SIPA1L3O60292 1781 aaPredicted RBP10.21□□□□□ -0.78
LMO3-226ENST00000541589 NOGQ13253 232 aa10.2□□□□□ -0.78
LMO3-226ENST00000541589 FMNL2Q96PY5 1086 aa10.2□□□□□ -0.78
LMO3-226ENST00000541589 LARP6Q9BRS8 491 aaKnown RBP10.2□□□□□ -0.78
LMO3-226ENST00000541589 ADARB2Q9NS39 739 aaKnown RBP10.2□□□□□ -0.78
LMO3-226ENST00000541589 GPRC5DQ9NZD1 345 aa10.2□□□□□ -0.78
LMO3-226ENST00000541589 MFSD10Q14728 455 aa10.19□□□□□ -0.78
LMO3-226ENST00000541589 HDGFL1Q5TGJ6 251 aa10.19□□□□□ -0.78
LMO3-226ENST00000541589 NPM2Q86SE8 214 aaKnown RBP10.19□□□□□ -0.78
LMO3-226ENST00000541589 SKAP1Q86WV1 359 aa10.19□□□□□ -0.78
LMO3-226ENST00000541589 SPRYD3Q8NCJ5 442 aa10.19□□□□□ -0.78
LMO3-226ENST00000541589 GLIS2Q9BZE0 524 aaPredicted RBP10.19□□□□□ -0.78
LMO3-226ENST00000541589 SAGE1Q9NXZ1 904 aa10.19□□□□□ -0.78
LMO3-226ENST00000541589 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.19□□□□□ -0.78
LMO3-226ENST00000541589 ZNF652Q9Y2D9 606 aa10.19□□□□□ -0.78
LMO3-226ENST00000541589 CCT4P50991 539 aaKnown RBP10.18□□□□□ -0.78
LMO3-226ENST00000541589 FLIIQ13045 1269 aa10.18□□□□□ -0.78
LMO3-226ENST00000541589 GRIPAP1Q4V328 841 aa10.18□□□□□ -0.78
LMO3-226ENST00000541589 G2E3Q7L622 706 aa10.18□□□□□ -0.78
LMO3-226ENST00000541589 LARGE2Q8N3Y3 721 aa10.18□□□□□ -0.78
LMO3-226ENST00000541589 NIP7Q9Y221 180 aaKnown RBP eCLIP10.18□□□□□ -0.78
LMO3-226ENST00000541589 USP16Q9Y5T5 823 aa10.18□□□□□ -0.78
LMO3-226ENST00000541589 FAM155AB1AL88 458 aaPredicted RBP10.17□□□□□ -0.78
LMO3-226ENST00000541589 KCNQ3O43525 872 aa10.17□□□□□ -0.78
LMO3-226ENST00000541589 HOXA10P31260 410 aaPredicted RBP10.17□□□□□ -0.78
LMO3-226ENST00000541589 PIP4K2AP48426 406 aaPredicted RBP10.17□□□□□ -0.78
LMO3-226ENST00000541589 RGS3P49796 1198 aa10.17□□□□□ -0.78
LMO3-226ENST00000541589 SMC5Q8IY18 1101 aa10.17□□□□□ -0.78
LMO3-226ENST00000541589 ZNF687Q8N1G0 1237 aa10.17□□□□□ -0.78
LMO3-226ENST00000541589 OXER1Q8TDS5 423 aa10.17□□□□□ -0.78
LMO3-226ENST00000541589 ZC3H15Q8WU90 426 aaKnown RBP10.17□□□□□ -0.78
LMO3-226ENST00000541589 LHX6Q9UPM6 363 aa10.17□□□□□ -0.78
LMO3-226ENST00000541589 CACNA1FO60840 1977 aa10.17□□□□□ -0.78
LMO3-226ENST00000541589 HIRAP54198 1017 aaPredicted RBP10.17□□□□□ -0.78
LMO3-226ENST00000541589 SLC51AQ86UW1 340 aa10.17□□□□□ -0.78
LMO3-226ENST00000541589 DDX27Q96GQ7 796 aaKnown RBP10.17□□□□□ -0.78
LMO3-226ENST00000541589 BACH2Q9BYV9 841 aa10.17□□□□□ -0.78
LMO3-226ENST00000541589 ABCC12Q96J65 1359 aa10.16□□□□□ -0.78
LMO3-226ENST00000541589 PRAMEF22A3QJZ6 481 aa10.16□□□□□ -0.78
LMO3-226ENST00000541589 CXCL9Q07325 125 aa10.16□□□□□ -0.78
LMO3-226ENST00000541589 FKBP5Q13451 457 aaPredicted RBP10.16□□□□□ -0.78
LMO3-226ENST00000541589 CDC37L1Q7L3B6 337 aa10.16□□□□□ -0.78
LMO3-226ENST00000541589 NIM1KQ8IY84 436 aa10.16□□□□□ -0.78
LMO3-226ENST00000541589 NECTIN2Q92692 538 aa10.16□□□□□ -0.78
LMO3-226ENST00000541589 VPS33BQ9H267 617 aa10.16□□□□□ -0.78
LMO3-226ENST00000541589 RIC1Q4ADV7 1423 aa10.16□□□□□ -0.78
LMO3-226ENST00000541589 FAM177BA6PVY3 158 aa10.15□□□□□ -0.78
LMO3-226ENST00000541589 NBPF26B4DH59 902 aa10.15□□□□□ -0.78
LMO3-226ENST00000541589 EIF2S2P20042 333 aaKnown RBP10.15□□□□□ -0.78
LMO3-226ENST00000541589 GMPSP49915 693 aaPredicted RBP10.15□□□□□ -0.78
LMO3-226ENST00000541589 HUNKP57058 714 aa10.15□□□□□ -0.78
LMO3-226ENST00000541589 HLFQ16534 295 aa10.15□□□□□ -0.78
LMO3-226ENST00000541589 NBPF10Q6P3W6 841 aaKnown RBP10.15□□□□□ -0.78
LMO3-226ENST00000541589 CTU1Q7Z7A3 348 aaKnown RBP10.15□□□□□ -0.78
LMO3-226ENST00000541589 NBPF15Q8N660 670 aa10.15□□□□□ -0.78
LMO3-226ENST00000541589 GCC1Q96CN9 775 aa10.15□□□□□ -0.78
LMO3-226ENST00000541589 C1orf115Q9H7X2 142 aa10.15□□□□□ -0.78
LMO3-226ENST00000541589 ZNF408Q9H9D4 720 aa10.15□□□□□ -0.78
LMO3-226ENST00000541589 RNF186Q9NXI6 227 aa10.15□□□□□ -0.78
LMO3-226ENST00000541589 CDHR2Q9BYE9 1310 aa10.15□□□□□ -0.78
LMO3-226ENST00000541589 F6X3S4 739 aa10.14□□□□□ -0.79
LMO3-226ENST00000541589 PPIP5K2O43314 1243 aa10.14□□□□□ -0.79
LMO3-226ENST00000541589 AOC3Q16853 763 aa10.14□□□□□ -0.79
LMO3-226ENST00000541589 RGMBQ6NW40 437 aa10.14□□□□□ -0.79
LMO3-226ENST00000541589 SLC4A10Q6U841 1118 aa10.14□□□□□ -0.79
LMO3-226ENST00000541589 RPAP2Q8IXW5 612 aaPredicted RBP10.14□□□□□ -0.79
LMO3-226ENST00000541589 TRPM4Q8TD43 1214 aa10.14□□□□□ -0.79
LMO3-226ENST00000541589 CRAMP1Q96RY5 1269 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms