RNA–Protein interactions for RNA: ENST00000541347.5

CX3CR1-205, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-205ENST00000541347 ME3Q16798 604 aa12.84□□□□□ -0.35
CX3CR1-205ENST00000541347 CCDC102BQ68D86 513 aa12.84□□□□□ -0.35
CX3CR1-205ENST00000541347 TCEANC2Q96MN5 208 aa12.84□□□□□ -0.35
CX3CR1-205ENST00000541347 BCL2L12Q9HB09 334 aa12.84□□□□□ -0.35
CX3CR1-205ENST00000541347 RPS6KA4O75676 772 aa12.84□□□□□ -0.35
CX3CR1-205ENST00000541347 ERFEQ4G0M1 354 aa12.84□□□□□ -0.35
CX3CR1-205ENST00000541347 CCDC83Q8IWF9 413 aa12.84□□□□□ -0.35
CX3CR1-205ENST00000541347 CCNL1Q9UK58 526 aaPredicted RBP12.84□□□□□ -0.35
CX3CR1-205ENST00000541347 RGL2O15211 777 aa12.84□□□□□ -0.35
CX3CR1-205ENST00000541347 ONECUT3O60422 494 aaPredicted RBP12.84□□□□□ -0.35
CX3CR1-205ENST00000541347 PHKA1P46020 1223 aa12.84□□□□□ -0.35
CX3CR1-205ENST00000541347 ST3GAL1Q11201 340 aa12.84□□□□□ -0.35
CX3CR1-205ENST00000541347 NEK1Q96PY6 1258 aa12.84□□□□□ -0.35
CX3CR1-205ENST00000541347 ARID4AP29374 1257 aaPredicted RBP12.83□□□□□ -0.36
CX3CR1-205ENST00000541347 IGHMBP2P38935 993 aaKnown RBP12.83□□□□□ -0.36
CX3CR1-205ENST00000541347 TOB2Q14106 344 aaPredicted RBP12.83□□□□□ -0.36
CX3CR1-205ENST00000541347 ANKRD1Q15327 319 aa12.83□□□□□ -0.36
CX3CR1-205ENST00000541347 TBC1D9BQ66K14 1250 aa12.83□□□□□ -0.36
CX3CR1-205ENST00000541347 ATRNO75882 1429 aa12.83□□□□□ -0.36
CX3CR1-205ENST00000541347 WASHC4Q2M389 1173 aa12.83□□□□□ -0.36
CX3CR1-205ENST00000541347 CHAMP1Q96JM3 812 aa12.83□□□□□ -0.36
CX3CR1-205ENST00000541347 NARFQ9UHQ1 456 aa12.83□□□□□ -0.36
CX3CR1-205ENST00000541347 SCN7AQ01118 1682 aa12.83□□□□□ -0.36
CX3CR1-205ENST00000541347 GNPATO15228 680 aa12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 BICDL1Q6ZP65 573 aa12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 SMC3Q9UQE7 1217 aa12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 AKAP11Q9UKA4 1901 aa12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 SNAP23O00161 211 aa12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 UQCRFS1P1P0C7P4 283 aa12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 SLC5A1P13866 664 aa12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 STOX1Q6ZVD7 989 aa12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 C3orf67Q6ZVT6 689 aa12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 APPBP2Q92624 585 aa12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 LMBRD1Q9NUN5 540 aa12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 SRP68Q9UHB9 627 aaKnown RBP12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 TRPC5Q9UL62 973 aaPredicted RBP12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 ARAP2Q8WZ64 1704 aa12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 SEPT12Q8IYM1 358 aa12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 NECAB1Q8N987 351 aa12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 PIH1D3Q9NQM4 214 aaKnown RBP12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 WDR33Q9C0J8 1336 aaKnown RBP12.82□□□□□ -0.36
CX3CR1-205ENST00000541347 COL4A1P02462 1669 aa12.81□□□□□ -0.36
CX3CR1-205ENST00000541347 A0A0G2JLW4 131 aa12.81□□□□□ -0.36
CX3CR1-205ENST00000541347 TTF1Q15361 905 aaPredicted RBP12.81□□□□□ -0.36
CX3CR1-205ENST00000541347 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.81□□□□□ -0.36
CX3CR1-205ENST00000541347 PUS7LQ9H0K6 701 aaKnown RBP12.81□□□□□ -0.36
CX3CR1-205ENST00000541347 SF3B3Q15393 1217 aaKnown RBP12.81□□□□□ -0.36
CX3CR1-205ENST00000541347 AMIGO3Q86WK7 504 aa12.81□□□□□ -0.36
CX3CR1-205ENST00000541347 FOXP2O15409 715 aa12.8□□□□□ -0.36
CX3CR1-205ENST00000541347 GJB2P29033 226 aa12.8□□□□□ -0.36
CX3CR1-205ENST00000541347 ADD2P35612 726 aa12.8□□□□□ -0.36
CX3CR1-205ENST00000541347 CDC5LQ99459 802 aaKnown RBP12.8□□□□□ -0.36
CX3CR1-205ENST00000541347 RTCBQ9Y3I0 505 aaKnown RBP12.8□□□□□ -0.36
CX3CR1-205ENST00000541347 SYT1P21579 422 aa12.8□□□□□ -0.36
CX3CR1-205ENST00000541347 CHRNDQ07001 517 aa12.8□□□□□ -0.36
CX3CR1-205ENST00000541347 ZSCAN25Q6NSZ9 544 aa12.8□□□□□ -0.36
CX3CR1-205ENST00000541347 DTNBO60941 627 aa12.8□□□□□ -0.36
CX3CR1-205ENST00000541347 ZPR1O75312 459 aa12.8□□□□□ -0.36
CX3CR1-205ENST00000541347 PRPF40AO75400 957 aaKnown RBP12.8□□□□□ -0.36
CX3CR1-205ENST00000541347 KLHL40Q2TBA0 621 aa12.8□□□□□ -0.36
CX3CR1-205ENST00000541347 SLC10A5Q5PT55 438 aa12.8□□□□□ -0.36
CX3CR1-205ENST00000541347 DDX49Q9Y6V7 483 aaKnown RBP12.8□□□□□ -0.36
CX3CR1-205ENST00000541347 LY75O60449 1722 aa12.8□□□□□ -0.36
CX3CR1-205ENST00000541347 HMGB1P09429 215 aaKnown RBP12.79□□□□□ -0.36
CX3CR1-205ENST00000541347 SLC9C2Q5TAH2 1124 aa12.79□□□□□ -0.36
CX3CR1-205ENST00000541347 TTLL5Q6EMB2 1281 aa12.79□□□□□ -0.36
CX3CR1-205ENST00000541347 Q6ZUG5 572 aa12.79□□□□□ -0.36
CX3CR1-205ENST00000541347 SPATA5Q8NB90 893 aa12.79□□□□□ -0.36
CX3CR1-205ENST00000541347 ARHGEF1Q92888 912 aaKnown RBP12.79□□□□□ -0.36
CX3CR1-205ENST00000541347 E7EWF7 191 aa12.79□□□□□ -0.36
CX3CR1-205ENST00000541347 STX6O43752 255 aa12.79□□□□□ -0.36
CX3CR1-205ENST00000541347 GTF2E1P29083 439 aaPredicted RBP12.79□□□□□ -0.36
CX3CR1-205ENST00000541347 SETDB2Q96T68 719 aa12.79□□□□□ -0.36
CX3CR1-205ENST00000541347 SBF2Q86WG5 1849 aa12.79□□□□□ -0.36
CX3CR1-205ENST00000541347 GPAA1O43292 621 aa12.79□□□□□ -0.36
CX3CR1-205ENST00000541347 IDH1O75874 414 aaKnown RBP12.79□□□□□ -0.36
CX3CR1-205ENST00000541347 ZSCAN22P10073 491 aaPredicted RBP12.79□□□□□ -0.36
CX3CR1-205ENST00000541347 RASGRF1Q13972 1273 aa12.79□□□□□ -0.36
CX3CR1-205ENST00000541347 ANKRD18AQ8IVF6 992 aa12.79□□□□□ -0.36
CX3CR1-205ENST00000541347 FSD2A1L4K1 749 aa12.78□□□□□ -0.36
CX3CR1-205ENST00000541347 UBE3CQ15386 1083 aa12.78□□□□□ -0.36
CX3CR1-205ENST00000541347 DHX32Q7L7V1 743 aaKnown RBP12.78□□□□□ -0.36
CX3CR1-205ENST00000541347 NYXQ9GZU5 481 aa12.78□□□□□ -0.36
CX3CR1-205ENST00000541347 BCAMP50895 628 aa12.78□□□□□ -0.36
CX3CR1-205ENST00000541347 BCL11BQ9C0K0 894 aaPredicted RBP12.78□□□□□ -0.36
CX3CR1-205ENST00000541347 CTNNA3Q9UI47 895 aa12.78□□□□□ -0.36
CX3CR1-205ENST00000541347 MYH7P12883 1935 aa12.78□□□□□ -0.36
CX3CR1-205ENST00000541347 FGAP02671 866 aa12.77□□□□□ -0.36
CX3CR1-205ENST00000541347 EXOSC10Q01780 885 aaKnown RBP12.77□□□□□ -0.36
CX3CR1-205ENST00000541347 STK3Q13188 491 aa12.77□□□□□ -0.36
CX3CR1-205ENST00000541347 AEBP2Q6ZN18 517 aaPredicted RBP12.77□□□□□ -0.36
CX3CR1-205ENST00000541347 NBPF5PQ86XG9 351 aaPredicted RBP12.77□□□□□ -0.36
CX3CR1-205ENST00000541347 LRRC2Q9BYS8 371 aa12.77□□□□□ -0.36
CX3CR1-205ENST00000541347 QTRT2Q9H974 415 aaKnown RBP12.77□□□□□ -0.36
CX3CR1-205ENST00000541347 BSDC1Q9NW68 430 aaPredicted RBP12.77□□□□□ -0.36
CX3CR1-205ENST00000541347 WWC3Q9ULE0 1092 aa12.77□□□□□ -0.36
CX3CR1-205ENST00000541347 TAF1LQ8IZX4 1826 aa12.77□□□□□ -0.36
CX3CR1-205ENST00000541347 ZNF532Q9HCE3 1301 aa12.77□□□□□ -0.37
CX3CR1-205ENST00000541347 TCRBV5S4A2TA0A5A2 114 aa12.77□□□□□ -0.37
CX3CR1-205ENST00000541347 GOLGA6L3A6NEY3 463 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 271.6 ms