RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 FKBP5Q13451 457 aaPredicted RBP30.69■■■□□ 2.5
LEMD3-203ENST00000541171 GCKRQ14397 625 aa30.69■■■□□ 2.5
LEMD3-203ENST00000541171 MRS2Q9HD23 443 aa30.69■■■□□ 2.5
LEMD3-203ENST00000541171 SCAF8Q9UPN6 1271 aaKnown RBP30.69■■■□□ 2.5
LEMD3-203ENST00000541171 ZNF609O15014 1411 aa30.68■■■□□ 2.5
LEMD3-203ENST00000541171 CASP8AP2Q9UKL3 1982 aa30.68■■■□□ 2.5
LEMD3-203ENST00000541171 MCOLN1Q9GZU1 580 aa30.67■■■□□ 2.5
LEMD3-203ENST00000541171 SPEF2Q9C093 1822 aa30.67■■■□□ 2.5
LEMD3-203ENST00000541171 ITGA6P23229 1130 aa30.66■■■□□ 2.5
LEMD3-203ENST00000541171 DNAAF4Q8WXU2 420 aa30.66■■■□□ 2.5
LEMD3-203ENST00000541171 MYH3P11055 1940 aa30.66■■■□□ 2.5
LEMD3-203ENST00000541171 FANCIQ9NVI1 1328 aa30.66■■■□□ 2.5
LEMD3-203ENST00000541171 FAM161AQ3B820 660 aa30.65■■■□□ 2.5
LEMD3-203ENST00000541171 DACT2Q5SW24 774 aa30.65■■■□□ 2.5
LEMD3-203ENST00000541171 TXNRD3Q86VQ6 643 aa30.65■■■□□ 2.5
LEMD3-203ENST00000541171 MPHOSPH8Q99549 860 aa30.65■■■□□ 2.5
LEMD3-203ENST00000541171 COA1Q9GZY4 146 aa30.65■■■□□ 2.5
LEMD3-203ENST00000541171 MYH16Q9H6N6 1097 aa30.65■■■□□ 2.5
LEMD3-203ENST00000541171 LEMD3Q9Y2U8 911 aa30.65■■■□□ 2.5
LEMD3-203ENST00000541171 PSME4Q14997 1843 aa30.65■■■□□ 2.5
LEMD3-203ENST00000541171 SLC10A3P09131 477 aa30.64■■■□□ 2.5
LEMD3-203ENST00000541171 DGKZQ13574 1117 aa30.64■■■□□ 2.5
LEMD3-203ENST00000541171 PLA2G12BQ9BX93 195 aa30.64■■■□□ 2.5
LEMD3-203ENST00000541171 CASP7P55210 303 aa30.63■■■□□ 2.49
LEMD3-203ENST00000541171 NBPF9Q3BBW0 867 aa30.63■■■□□ 2.49
LEMD3-203ENST00000541171 VAMP4O75379 141 aa30.62■■■□□ 2.49
LEMD3-203ENST00000541171 PRAMEF18Q5VWM3 479 aa30.62■■■□□ 2.49
LEMD3-203ENST00000541171 OGFOD1Q8N543 542 aa30.62■■■□□ 2.49
LEMD3-203ENST00000541171 LINS1Q8NG48 757 aa30.62■■■□□ 2.49
LEMD3-203ENST00000541171 ANKRD2Q9GZV1 360 aa30.62■■■□□ 2.49
LEMD3-203ENST00000541171 ZNF804BA4D1E1 1349 aa30.62■■■□□ 2.49
LEMD3-203ENST00000541171 PITPNM2Q9BZ72 1349 aa30.62■■■□□ 2.49
LEMD3-203ENST00000541171 TRPA1O75762 1119 aa30.61■■■□□ 2.49
LEMD3-203ENST00000541171 KLRK1P26718 216 aa30.61■■■□□ 2.49
LEMD3-203ENST00000541171 EXOSC9Q06265 439 aaKnown RBP30.61■■■□□ 2.49
LEMD3-203ENST00000541171 NCBP3Q53F19 620 aaKnown RBP30.61■■■□□ 2.49
LEMD3-203ENST00000541171 STRIP1Q5VSL9 837 aa30.61■■■□□ 2.49
LEMD3-203ENST00000541171 RNF186Q9NXI6 227 aa30.61■■■□□ 2.49
LEMD3-203ENST00000541171 CSF1RP07333 972 aa30.6■■■□□ 2.49
LEMD3-203ENST00000541171 KCNJ4P48050 445 aa30.6■■■□□ 2.49
LEMD3-203ENST00000541171 MOB2Q70IA6 237 aa30.6■■■□□ 2.49
LEMD3-203ENST00000541171 CSRNP1Q96S65 589 aa30.6■■■□□ 2.49
LEMD3-203ENST00000541171 MYO3BQ8WXR4 1341 aa30.59■■■□□ 2.49
LEMD3-203ENST00000541171 ANP32CO43423 234 aa30.59■■■□□ 2.49
LEMD3-203ENST00000541171 TTLL5Q6EMB2 1281 aa30.59■■■□□ 2.49
LEMD3-203ENST00000541171 RASAL3Q86YV0 1011 aa30.59■■■□□ 2.49
LEMD3-203ENST00000541171 WDR63Q8IWG1 891 aa30.59■■■□□ 2.49
LEMD3-203ENST00000541171 SAGE1Q9NXZ1 904 aa30.59■■■□□ 2.49
LEMD3-203ENST00000541171 FKBP1BP68106 108 aa30.58■■■□□ 2.49
LEMD3-203ENST00000541171 ANKRD18BA2A2Z9 1011 aa30.57■■■□□ 2.48
LEMD3-203ENST00000541171 CHRNDQ07001 517 aa30.57■■■□□ 2.48
LEMD3-203ENST00000541171 F6X3S4 739 aa30.56■■■□□ 2.48
LEMD3-203ENST00000541171 UBE2Q2LH0YL09 131 aa30.56■■■□□ 2.48
LEMD3-203ENST00000541171 WNT10BO00744 389 aa30.56■■■□□ 2.48
LEMD3-203ENST00000541171 SASH1O94885 1247 aa30.56■■■□□ 2.48
LEMD3-203ENST00000541171 GTF2IP78347 998 aa30.56■■■□□ 2.48
LEMD3-203ENST00000541171 TTLL12Q14166 644 aaPredicted RBP30.56■■■□□ 2.48
LEMD3-203ENST00000541171 CHMP3Q9Y3E7 222 aa30.56■■■□□ 2.48
LEMD3-203ENST00000541171 KIAA0825Q8IV33 1275 aa30.55■■■□□ 2.48
LEMD3-203ENST00000541171 SNAP23O00161 211 aa30.54■■■□□ 2.48
LEMD3-203ENST00000541171 HELBQ8NG08 1087 aaPredicted RBP30.54■■■□□ 2.48
LEMD3-203ENST00000541171 TAF5LO75529 589 aa30.53■■■□□ 2.48
LEMD3-203ENST00000541171 HDAC9Q9UKV0 1011 aa30.53■■■□□ 2.48
LEMD3-203ENST00000541171 PAPPA2Q9BXP8 1791 aa30.53■■■□□ 2.48
LEMD3-203ENST00000541171 FOXO4P98177 505 aa30.52■■■□□ 2.48
LEMD3-203ENST00000541171 MLLT1Q03111 559 aaPredicted RBP30.52■■■□□ 2.48
LEMD3-203ENST00000541171 IFIT5Q13325 482 aaKnown RBP30.52■■■□□ 2.48
LEMD3-203ENST00000541171 CD209Q9NNX6 404 aa30.52■■■□□ 2.48
LEMD3-203ENST00000541171 SPINK5Q9NQ38 1064 aaPredicted RBP30.52■■■□□ 2.48
LEMD3-203ENST00000541171 NF2P35240 595 aa30.51■■■□□ 2.47
LEMD3-203ENST00000541171 BEND3Q5T5X7 828 aa30.51■■■□□ 2.47
LEMD3-203ENST00000541171 REM2Q8IYK8 340 aaPredicted RBP30.5■■■□□ 2.47
LEMD3-203ENST00000541171 RGS19P49795 217 aa30.49■■■□□ 2.47
LEMD3-203ENST00000541171 PRKG1Q13976 671 aa30.49■■■□□ 2.47
LEMD3-203ENST00000541171 ZNF646O15015 1829 aaPredicted RBP30.49■■■□□ 2.47
LEMD3-203ENST00000541171 AKAP11Q9UKA4 1901 aa30.49■■■□□ 2.47
LEMD3-203ENST00000541171 MMP14P50281 582 aa30.48■■■□□ 2.47
LEMD3-203ENST00000541171 LMBR1LQ6UX01 489 aa30.48■■■□□ 2.47
LEMD3-203ENST00000541171 CACNA1FO60840 1977 aa30.47■■■□□ 2.47
LEMD3-203ENST00000541171 FAM9BQ8IZU0 186 aa30.47■■■□□ 2.47
LEMD3-203ENST00000541171 ZNF316A6NFI3 1004 aaPredicted RBP30.46■■■□□ 2.47
LEMD3-203ENST00000541171 PLIN1O60240 522 aa30.46■■■□□ 2.47
LEMD3-203ENST00000541171 MKRN3Q13064 507 aaKnown RBP30.46■■■□□ 2.47
LEMD3-203ENST00000541171 EPHA10Q5JZY3 1008 aa30.46■■■□□ 2.47
LEMD3-203ENST00000541171 APOBEC3FQ8IUX4 373 aaKnown RBP30.46■■■□□ 2.47
LEMD3-203ENST00000541171 ZNF594Q96JF6 807 aaPredicted RBP30.46■■■□□ 2.47
LEMD3-203ENST00000541171 TAF7LQ5H9L4 462 aa30.45■■■□□ 2.47
LEMD3-203ENST00000541171 F8W031 263 aaPredicted RBP30.44■■■□□ 2.46
LEMD3-203ENST00000541171 ZEB1P37275 1124 aaPredicted RBP30.44■■■□□ 2.46
LEMD3-203ENST00000541171 DLGAP5Q15398 846 aa30.44■■■□□ 2.46
LEMD3-203ENST00000541171 CCDC57Q2TAC2 916 aa30.44■■■□□ 2.46
LEMD3-203ENST00000541171 CERS5Q8N5B7 392 aa30.44■■■□□ 2.46
LEMD3-203ENST00000541171 ZBED3Q96IU2 234 aaPredicted RBP30.44■■■□□ 2.46
LEMD3-203ENST00000541171 IRS2Q9Y4H2 1338 aa30.44■■■□□ 2.46
LEMD3-203ENST00000541171 GRM8O00222 908 aa30.43■■■□□ 2.46
LEMD3-203ENST00000541171 SLC4A10Q6U841 1118 aa30.43■■■□□ 2.46
LEMD3-203ENST00000541171 C15orf52Q6ZUT6 534 aaKnown RBP30.43■■■□□ 2.46
LEMD3-203ENST00000541171 ARMC9Q7Z3E5 817 aa30.43■■■□□ 2.46
LEMD3-203ENST00000541171 ZNF804AQ7Z570 1209 aa30.43■■■□□ 2.46
LEMD3-203ENST00000541171 C9orf78Q9NZ63 289 aaPredicted RBP30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms