RNA–Protein interactions for RNA: ENST00000541064.5

NPC2-203, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2 BASIC

Gene NPC2, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-203ENST00000541064 TGFB2P61812 414 aa11.04□□□□□ -0.64
NPC2-203ENST00000541064 TRIM28Q13263 835 aaKnown RBP11.04□□□□□ -0.64
NPC2-203ENST00000541064 GPR162Q16538 588 aa11.04□□□□□ -0.64
NPC2-203ENST00000541064 ERC1Q8IUD2 1116 aa11.04□□□□□ -0.64
NPC2-203ENST00000541064 PLEKHM2Q8IWE5 1019 aa11.04□□□□□ -0.64
NPC2-203ENST00000541064 MYD88Q99836 296 aa11.04□□□□□ -0.64
NPC2-203ENST00000541064 UPF2Q9HAU5 1272 aaKnown RBP11.04□□□□□ -0.64
NPC2-203ENST00000541064 GRIN3BO60391 1043 aa11.03□□□□□ -0.64
NPC2-203ENST00000541064 RBM26Q5T8P6 1007 aaKnown RBP11.03□□□□□ -0.64
NPC2-203ENST00000541064 KIF6Q6ZMV9 814 aa11.03□□□□□ -0.64
NPC2-203ENST00000541064 CCDC191Q8NCU4 936 aa11.03□□□□□ -0.64
NPC2-203ENST00000541064 PTPN5P54829 565 aa11.02□□□□□ -0.64
NPC2-203ENST00000541064 HSP90AB3PQ58FF7 597 aa11.02□□□□□ -0.64
NPC2-203ENST00000541064 TTC22Q5TAA0 569 aa11.02□□□□□ -0.64
NPC2-203ENST00000541064 CLEC4GQ6UXB4 293 aa11.02□□□□□ -0.64
NPC2-203ENST00000541064 NLGN2Q8NFZ4 835 aa11.02□□□□□ -0.64
NPC2-203ENST00000541064 KIF1BPQ96EK5 621 aa11.02□□□□□ -0.64
NPC2-203ENST00000541064 DDRGK1Q96HY6 314 aa11.02□□□□□ -0.64
NPC2-203ENST00000541064 CWC25Q9NXE8 425 aaPredicted RBP11.02□□□□□ -0.64
NPC2-203ENST00000541064 SALL3Q9BXA9 1300 aa11.02□□□□□ -0.65
NPC2-203ENST00000541064 ERVV-1B6SEH8 477 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 H7C1W4 665 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 RABL6Q3YEC7 729 aaPredicted RBP11.01□□□□□ -0.65
NPC2-203ENST00000541064 DZIP3Q86Y13 1208 aaKnown RBP11.01□□□□□ -0.65
NPC2-203ENST00000541064 WNT2BQ93097 391 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 SUCLG2Q96I99 432 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 ISCA1Q9BUE6 129 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 STAP2Q9UGK3 403 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 EXOC6BQ9Y2D4 811 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 ZNF330Q9Y3S2 320 aaPredicted RBP11.01□□□□□ -0.65
NPC2-203ENST00000541064 MAP3K15Q6ZN16 1313 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 SPDYE16A6NNV3 312 aaPredicted RBP11.01□□□□□ -0.65
NPC2-203ENST00000541064 POLRMTO00411 1230 aaKnown RBP11.01□□□□□ -0.65
NPC2-203ENST00000541064 SURF6O75683 361 aaKnown RBP11.01□□□□□ -0.65
NPC2-203ENST00000541064 COL9A1P20849 921 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 MLLT3P42568 568 aaPredicted RBP11.01□□□□□ -0.65
NPC2-203ENST00000541064 CASP7P55210 303 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 TCIRG1Q13488 830 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 NFIXQ14938 502 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 C6orf132Q5T0Z8 1188 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 TTLL7Q6ZT98 887 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 DDX12PQ92771 950 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 KAZALD1Q96I82 304 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 IPO9Q96P70 1041 aaKnown RBP11.01□□□□□ -0.65
NPC2-203ENST00000541064 GPBP1L1Q9HC44 474 aaPredicted RBP11.01□□□□□ -0.65
NPC2-203ENST00000541064 RABGEF1Q9UJ41 708 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 TBC1D2BQ9UPU7 963 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 ZNF652Q9Y2D9 606 aa11.01□□□□□ -0.65
NPC2-203ENST00000541064 C4AP0C0L4 1744 aa11□□□□□ -0.65
NPC2-203ENST00000541064 ANKRD36CQ5JPF3 1778 aa11□□□□□ -0.65
NPC2-203ENST00000541064 CDC45O75419 566 aa11□□□□□ -0.65
NPC2-203ENST00000541064 CAMTA2O94983 1202 aa11□□□□□ -0.65
NPC2-203ENST00000541064 PIP4K2AP48426 406 aaPredicted RBP11□□□□□ -0.65
NPC2-203ENST00000541064 PDE1AP54750 535 aa11□□□□□ -0.65
NPC2-203ENST00000541064 DDR1Q08345 913 aa11□□□□□ -0.65
NPC2-203ENST00000541064 BICC1Q9H694 974 aaKnown RBP11□□□□□ -0.65
NPC2-203ENST00000541064 SERPINB2P05120 415 aa10.99□□□□□ -0.65
NPC2-203ENST00000541064 MX1P20591 662 aa10.99□□□□□ -0.65
NPC2-203ENST00000541064 PROX2Q3B8N5 592 aa10.99□□□□□ -0.65
NPC2-203ENST00000541064 GIGYF2Q6Y7W6 1299 aaKnown RBP10.99□□□□□ -0.65
NPC2-203ENST00000541064 RHPN1Q8TCX5 695 aa10.99□□□□□ -0.65
NPC2-203ENST00000541064 SETDB2Q96T68 719 aa10.99□□□□□ -0.65
NPC2-203ENST00000541064 SMARCA5O60264 1052 aaPredicted RBP10.98□□□□□ -0.65
NPC2-203ENST00000541064 GSPT1P15170 499 aaKnown RBP10.98□□□□□ -0.65
NPC2-203ENST00000541064 CASC1Q6TDU7 716 aa10.98□□□□□ -0.65
NPC2-203ENST00000541064 THSD4Q6ZMP0 1018 aa10.98□□□□□ -0.65
NPC2-203ENST00000541064 UBE3BQ7Z3V4 1068 aa10.98□□□□□ -0.65
NPC2-203ENST00000541064 TBC1D32Q96NH3 1257 aa10.98□□□□□ -0.65
NPC2-203ENST00000541064 PLA2G12BQ9BX93 195 aa10.98□□□□□ -0.65
NPC2-203ENST00000541064 ZBTB3Q9H5J0 574 aa10.98□□□□□ -0.65
NPC2-203ENST00000541064 COPRSQ9NQ92 184 aa10.98□□□□□ -0.65
NPC2-203ENST00000541064 TTC41PQ6P2S7 1318 aa10.98□□□□□ -0.65
NPC2-203ENST00000541064 C10orf71Q711Q0 1435 aa10.98□□□□□ -0.65
NPC2-203ENST00000541064 A0A0G2JLW4 131 aa10.97□□□□□ -0.65
NPC2-203ENST00000541064 ATP5J2-PTCD1G3V325 749 aa10.97□□□□□ -0.65
NPC2-203ENST00000541064 APBB1O00213 710 aa10.97□□□□□ -0.65
NPC2-203ENST00000541064 PCCAP05165 728 aaPredicted RBP10.97□□□□□ -0.65
NPC2-203ENST00000541064 TBC1D9BQ66K14 1250 aa10.97□□□□□ -0.65
NPC2-203ENST00000541064 C16orf71Q8IYS4 520 aaPredicted RBP10.97□□□□□ -0.65
NPC2-203ENST00000541064 CLASRPQ8N2M8 674 aaKnown RBP10.97□□□□□ -0.65
NPC2-203ENST00000541064 IL27Q8NEV9 243 aa10.97□□□□□ -0.65
NPC2-203ENST00000541064 CDHR2Q9BYE9 1310 aa10.97□□□□□ -0.65
NPC2-203ENST00000541064 KIF13BQ9NQT8 1826 aa10.96□□□□□ -0.65
NPC2-203ENST00000541064 G3BP1Q13283 466 aaKnown RBP eCLIP10.96□□□□□ -0.65
NPC2-203ENST00000541064 OS9Q13438 667 aaPredicted RBP10.96□□□□□ -0.65
NPC2-203ENST00000541064 BICDL1Q6ZP65 573 aa10.96□□□□□ -0.65
NPC2-203ENST00000541064 OTUD7AQ8TE49 926 aaPredicted RBP10.96□□□□□ -0.65
NPC2-203ENST00000541064 GPATCH3Q96I76 525 aa10.96□□□□□ -0.65
NPC2-203ENST00000541064 KDM4CQ9H3R0 1056 aa10.96□□□□□ -0.65
NPC2-203ENST00000541064 PIM2Q9P1W9 311 aa10.96□□□□□ -0.65
NPC2-203ENST00000541064 CARMIL3Q8ND23 1372 aa10.96□□□□□ -0.65
NPC2-203ENST00000541064 DPEP1P16444 411 aa10.95□□□□□ -0.66
NPC2-203ENST00000541064 YBX3P16989 372 aaKnown RBP eCLIP10.95□□□□□ -0.663e-8■■■□□ 18.3
NPC2-203ENST00000541064 SDSP20132 328 aa10.95□□□□□ -0.66
NPC2-203ENST00000541064 RFX5P48382 616 aaPredicted RBP10.95□□□□□ -0.66
NPC2-203ENST00000541064 NUP98P52948 1817 aa10.95□□□□□ -0.66
NPC2-203ENST00000541064 FOXO4P98177 505 aa10.95□□□□□ -0.66
NPC2-203ENST00000541064 CHD4Q14839 1912 aa10.95□□□□□ -0.66
NPC2-203ENST00000541064 EPHA10Q5JZY3 1008 aa10.95□□□□□ -0.66
NPC2-203ENST00000541064 TBC1D9Q6ZT07 1266 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms