RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 CHD2O14647 1828 aaKnown RBP12.13□□□□□ -0.47
CDC42SE1-207ENST00000540998 FDPSP14324 419 aaKnown RBP12.13□□□□□ -0.47
CDC42SE1-207ENST00000540998 CFAP45Q9UL16 551 aa12.13□□□□□ -0.47
CDC42SE1-207ENST00000540998 UTYO14607 1347 aa12.13□□□□□ -0.47
CDC42SE1-207ENST00000540998 PI16Q6UXB8 463 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 ARHGEF25Q86VW2 580 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 ENGASEQ8NFI3 743 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 SMARCC2Q8TAQ2 1214 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 CABLES1Q8TDN4 633 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 METTL22Q9BUU2 404 aaPredicted RBP12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 PUS3Q9BZE2 481 aaKnown RBP12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 IFNKQ9P0W0 207 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 HEG1Q9ULI3 1381 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 ERICH4A6NGS2 130 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 E7EWF7 191 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 PFKFB2O60825 505 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 ATP1A3P13637 1013 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 TMC6Q7Z403 805 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 KIF18AQ8NI77 898 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 XPO4Q9C0E2 1151 aaKnown RBP12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 CGNQ9P2M7 1197 aaKnown RBP12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 RCOR1Q9UKL0 485 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 JCADQ9P266 1359 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 M0R2C6 588 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 LMOD1P29536 600 aaPredicted RBP12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 MARCKSP29966 332 aaPredicted RBP12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 TSGA10IPQ3SY00 556 aa12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 DHX32Q7L7V1 743 aaKnown RBP12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 U3KPZ7 1027 aaPredicted RBP12.12□□□□□ -0.47
CDC42SE1-207ENST00000540998 UBE2Q2LH0YL09 131 aa12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 PDIA3P30101 505 aaKnown RBP12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 FKBP4Q02790 459 aaKnown RBP eCLIP12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 ERCC6LQ2NKX8 1250 aa12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 SYT10Q6XYQ8 523 aa12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 CCAR2Q8N163 923 aaKnown RBP12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 THEMISQ8N1K5 641 aaPredicted RBP12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 HAUS7Q99871 368 aa12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 EPC1Q9H2F5 836 aa12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 ZNF330Q9Y3S2 320 aaPredicted RBP12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 HSPD1P10809 573 aaKnown RBP12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 FAM160A1Q05DH4 1040 aa12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 KRT32Q14532 448 aa12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 CHRNA2Q15822 529 aa12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 ARMCX5Q6P1M9 558 aa12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 COPRSQ9NQ92 184 aa12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 DDX41Q9UJV9 622 aaKnown RBP12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 LAMA4Q16363 1823 aa12.11□□□□□ -0.47
CDC42SE1-207ENST00000540998 KIF28PB7ZC32 967 aa12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 E4F1Q66K89 784 aaPredicted RBP12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 FAM177A1Q8N128 213 aaPredicted RBP12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 GTPBP4Q9BZE4 634 aaKnown RBP12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 ZSCAN16Q9H4T2 348 aaPredicted RBP12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 PAG1Q9NWQ8 432 aa12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 ZNF446Q9NWS9 450 aa12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 OGFRQ9NZT2 677 aa12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 MAST3O60307 1309 aa12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 PALLDQ8WX93 1383 aa12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 TTLL7Q6ZT98 887 aa12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 KBTBD3Q8NAB2 608 aa12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 C5P01031 1676 aa12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 CARMIL3Q8ND23 1372 aa12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 RBM6P78332 1123 aaKnown RBP12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 SF3A1Q15459 793 aaKnown RBP12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 FMR1NBQ8N0W7 255 aaPredicted RBP12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 MRFAP1L1Q96HT8 127 aa12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 ZBTB3Q9H5J0 574 aa12.1□□□□□ -0.47
CDC42SE1-207ENST00000540998 LRP10Q7Z4F1 713 aa12.09□□□□□ -0.47
CDC42SE1-207ENST00000540998 CEP57L1Q8IYX8 460 aa12.09□□□□□ -0.47
CDC42SE1-207ENST00000540998 OSBP2Q969R2 916 aa12.09□□□□□ -0.47
CDC42SE1-207ENST00000540998 ALDH8A1Q9H2A2 487 aaPredicted RBP12.09□□□□□ -0.47
CDC42SE1-207ENST00000540998 SLC52A2Q9HAB3 445 aa12.09□□□□□ -0.47
CDC42SE1-207ENST00000540998 PAXBP1Q9Y5B6 917 aa12.09□□□□□ -0.47
CDC42SE1-207ENST00000540998 KDM6AO15550 1401 aaPredicted RBP12.09□□□□□ -0.47
CDC42SE1-207ENST00000540998 ADGRL3Q9HAR2 1447 aa12.09□□□□□ -0.47
CDC42SE1-207ENST00000540998 LMO7Q8WWI1 1683 aa12.09□□□□□ -0.47
CDC42SE1-207ENST00000540998 ADORA1P30542 326 aa12.09□□□□□ -0.47
CDC42SE1-207ENST00000540998 EXOSC10Q01780 885 aaKnown RBP12.09□□□□□ -0.47
CDC42SE1-207ENST00000540998 SARM1Q6SZW1 724 aa12.09□□□□□ -0.47
CDC42SE1-207ENST00000540998 ATG9AQ7Z3C6 839 aa12.09□□□□□ -0.47
CDC42SE1-207ENST00000540998 DPF2Q92785 391 aa12.09□□□□□ -0.47
CDC42SE1-207ENST00000540998 NEDD4P46934 1319 aa12.09□□□□□ -0.47
CDC42SE1-207ENST00000540998 ANKARQ7Z5J8 1434 aa12.09□□□□□ -0.47
CDC42SE1-207ENST00000540998 MROH7-TTC4A0A0A0MT08 1334 aa12.08□□□□□ -0.48
CDC42SE1-207ENST00000540998 FANCGO15287 622 aa12.08□□□□□ -0.48
CDC42SE1-207ENST00000540998 SCARF1Q14162 830 aa12.08□□□□□ -0.48
CDC42SE1-207ENST00000540998 STK38Q15208 465 aa12.08□□□□□ -0.48
CDC42SE1-207ENST00000540998 KCNH5Q8NCM2 988 aa12.08□□□□□ -0.48
CDC42SE1-207ENST00000540998 MRPS27Q92552 414 aaKnown RBP12.08□□□□□ -0.48
CDC42SE1-207ENST00000540998 ANO10Q9NW15 660 aa12.08□□□□□ -0.48
CDC42SE1-207ENST00000540998 SLFN14P0C7P3 912 aa12.08□□□□□ -0.48
CDC42SE1-207ENST00000540998 WASHC4Q2M389 1173 aa12.08□□□□□ -0.48
CDC42SE1-207ENST00000540998 TRERF1Q96PN7 1200 aa12.08□□□□□ -0.48
CDC42SE1-207ENST00000540998 FOXP2O15409 715 aa12.08□□□□□ -0.48
CDC42SE1-207ENST00000540998 CDC25BP30305 580 aa12.08□□□□□ -0.48
CDC42SE1-207ENST00000540998 MAPK8IP2Q13387 824 aaPredicted RBP12.08□□□□□ -0.48
CDC42SE1-207ENST00000540998 SPECC1Q5M775 1068 aa12.08□□□□□ -0.48
CDC42SE1-207ENST00000540998 RAPGEF4Q8WZA2 1011 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms