RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 FER1L6Q2WGJ9 1857 aa15.17■□□□□ 0.02
SMAD3-204ENST00000540846 ERC2O15083 957 aa15.17■□□□□ 0.02
SMAD3-204ENST00000540846 SLC4A3P48751 1232 aa15.17■□□□□ 0.02
SMAD3-204ENST00000540846 TIMM10P62072 90 aa15.17■□□□□ 0.02
SMAD3-204ENST00000540846 PUM3Q15397 648 aaKnown RBP15.17■□□□□ 0.02
SMAD3-204ENST00000540846 ATP2B3Q16720 1220 aa15.17■□□□□ 0.02
SMAD3-204ENST00000540846 CNKSR1Q969H4 720 aa15.17■□□□□ 0.02
SMAD3-204ENST00000540846 DBNDD2Q9BQY9 259 aa15.17■□□□□ 0.02
SMAD3-204ENST00000540846 ANP32EQ9BTT0 268 aa15.17■□□□□ 0.02
SMAD3-204ENST00000540846 CCDC8Q9H0W5 538 aaPredicted RBP15.17■□□□□ 0.02
SMAD3-204ENST00000540846 TRIM6-TRIM34B2RNG4 842 aa15.16■□□□□ 0.02
SMAD3-204ENST00000540846 REC8O95072 547 aa15.16■□□□□ 0.02
SMAD3-204ENST00000540846 IFIT2P09913 472 aaKnown RBP15.16■□□□□ 0.02
SMAD3-204ENST00000540846 ADORA1P30542 326 aa15.16■□□□□ 0.02
SMAD3-204ENST00000540846 GPSM2P81274 684 aa15.16■□□□□ 0.02
SMAD3-204ENST00000540846 NLGN2Q8NFZ4 835 aa15.16■□□□□ 0.02
SMAD3-204ENST00000540846 KIF2CQ99661 725 aa15.16■□□□□ 0.02
SMAD3-204ENST00000540846 ANKRD2Q9GZV1 360 aa15.16■□□□□ 0.02
SMAD3-204ENST00000540846 PODXL2Q9NZ53 605 aa15.16■□□□□ 0.02
SMAD3-204ENST00000540846 AKAP2Q9Y2D5 859 aa15.16■□□□□ 0.02
SMAD3-204ENST00000540846 XDHP47989 1333 aa15.16■□□□□ 0.02
SMAD3-204ENST00000540846 MYH13Q9UKX3 1938 aa15.16■□□□□ 0.02
SMAD3-204ENST00000540846 CHMLP26374 656 aa15.15■□□□□ 0.02
SMAD3-204ENST00000540846 LPIN2Q92539 896 aa15.15■□□□□ 0.02
SMAD3-204ENST00000540846 RILPL2Q969X0 211 aa15.15■□□□□ 0.02
SMAD3-204ENST00000540846 ESYT1Q9BSJ8 1104 aa15.15■□□□□ 0.02
SMAD3-204ENST00000540846 USP26Q9BXU7 913 aa15.15■□□□□ 0.02
SMAD3-204ENST00000540846 TBC1D2Q9BYX2 928 aa15.15■□□□□ 0.02
SMAD3-204ENST00000540846 UBE4AQ14139 1066 aa15.15■□□□□ 0.02
SMAD3-204ENST00000540846 TTLL6Q8N841 843 aa15.15■□□□□ 0.02
SMAD3-204ENST00000540846 ZNF646O15015 1829 aaPredicted RBP15.14■□□□□ 0.01
SMAD3-204ENST00000540846 KLRK1P26718 216 aa15.14■□□□□ 0.01
SMAD3-204ENST00000540846 CNTROBQ8N137 903 aa15.14■□□□□ 0.01
SMAD3-204ENST00000540846 XAGE2Q96GT9 111 aa15.14■□□□□ 0.01
SMAD3-204ENST00000540846 FHDC1Q9C0D6 1143 aaPredicted RBP15.14■□□□□ 0.01
SMAD3-204ENST00000540846 PPP1R1BQ9UD71 204 aaPredicted RBP15.14■□□□□ 0.01
SMAD3-204ENST00000540846 SNX21Q969T3 373 aa15.13■□□□□ 0.01
SMAD3-204ENST00000540846 PIM2Q9P1W9 311 aa15.13■□□□□ 0.01
SMAD3-204ENST00000540846 POLLQ9UGP5 575 aa15.13■□□□□ 0.01
SMAD3-204ENST00000540846 LEMD3Q9Y2U8 911 aa15.13■□□□□ 0.01
SMAD3-204ENST00000540846 ZNF804BA4D1E1 1349 aa15.13■□□□□ 0.01
SMAD3-204ENST00000540846 CHD4Q14839 1912 aa15.13■□□□□ 0.01
SMAD3-204ENST00000540846 SLC5A1P13866 664 aa15.12■□□□□ 0.01
SMAD3-204ENST00000540846 C15orf52Q6ZUT6 534 aaKnown RBP15.12■□□□□ 0.01
SMAD3-204ENST00000540846 TXNRD3Q86VQ6 643 aa15.12■□□□□ 0.01
SMAD3-204ENST00000540846 KLHL34Q8N239 644 aa15.12■□□□□ 0.01
SMAD3-204ENST00000540846 TBC1D16Q8TBP0 767 aa15.12■□□□□ 0.01
SMAD3-204ENST00000540846 NEUROD6Q96NK8 337 aa15.12■□□□□ 0.01
SMAD3-204ENST00000540846 NSFL1CQ9UNZ2 370 aaKnown RBP15.12■□□□□ 0.01
SMAD3-204ENST00000540846 MYO5AQ9Y4I1 1855 aaKnown RBP15.12■□□□□ 0.01
SMAD3-204ENST00000540846 DOCK2Q92608 1830 aa15.12■□□□□ 0.01
SMAD3-204ENST00000540846 RTFDC1Q9BY42 306 aaPredicted RBP15.11■□□□□ 0.01
SMAD3-204ENST00000540846 ANKIB1Q9P2G1 1089 aa15.11■□□□□ 0.01
SMAD3-204ENST00000540846 MED23Q9ULK4 1368 aa15.11■□□□□ 0.01
SMAD3-204ENST00000540846 COL1A1P02452 1464 aaPredicted RBP15.11■□□□□ 0.01
SMAD3-204ENST00000540846 EPB41L2O43491 1005 aaKnown RBP15.11■□□□□ 0.01
SMAD3-204ENST00000540846 C21orf2O43822 256 aa15.11■□□□□ 0.01
SMAD3-204ENST00000540846 IFIT1P09914 478 aaKnown RBP15.11■□□□□ 0.01
SMAD3-204ENST00000540846 ATP5JP18859 108 aa15.11■□□□□ 0.01
SMAD3-204ENST00000540846 PHKA1P46020 1223 aa15.11■□□□□ 0.01
SMAD3-204ENST00000540846 CC2D2BQ6DHV5 1058 aa15.11■□□□□ 0.01
SMAD3-204ENST00000540846 ZNF512BQ96KM6 892 aaPredicted RBP15.11■□□□□ 0.01
SMAD3-204ENST00000540846 GPR101Q96P66 508 aaPredicted RBP15.11■□□□□ 0.01
SMAD3-204ENST00000540846 UFL1O94874 794 aa15.1■□□□□ 0.01
SMAD3-204ENST00000540846 MAP4K4O95819 1239 aaPredicted RBP15.1■□□□□ 0.01
SMAD3-204ENST00000540846 ATP2B4P23634 1241 aa15.1■□□□□ 0.01
SMAD3-204ENST00000540846 ARID4AP29374 1257 aaPredicted RBP15.1■□□□□ 0.01
SMAD3-204ENST00000540846 SCARF1Q14162 830 aa15.1■□□□□ 0.01
SMAD3-204ENST00000540846 CCDC102BQ68D86 513 aa15.1■□□□□ 0.01
SMAD3-204ENST00000540846 HSCBQ8IWL3 235 aa15.1■□□□□ 0.01
SMAD3-204ENST00000540846 MPNDQ8N594 471 aa15.1■□□□□ 0.01
SMAD3-204ENST00000540846 FAM84BQ96KN1 310 aaPredicted RBP15.1■□□□□ 0.01
SMAD3-204ENST00000540846 SYT17Q9BSW7 474 aa15.1■□□□□ 0.01
SMAD3-204ENST00000540846 GGA1Q9UJY5 639 aa15.1■□□□□ 0.01
SMAD3-204ENST00000540846 COL4A5P29400 1685 aa15.09■□□□□ 0.01
SMAD3-204ENST00000540846 ZBTB22O15209 634 aa15.09■□□□□ 0.01
SMAD3-204ENST00000540846 GYG1P46976 350 aa15.09■□□□□ 0.01
SMAD3-204ENST00000540846 BCAMP50895 628 aa15.09■□□□□ 0.01
SMAD3-204ENST00000540846 RABEP1Q15276 862 aa15.09■□□□□ 0.01
SMAD3-204ENST00000540846 DALRD3Q5D0E6 543 aaKnown RBP15.09■□□□□ 0.01
SMAD3-204ENST00000540846 FBXO33Q7Z6M2 555 aa15.09■□□□□ 0.01
SMAD3-204ENST00000540846 EVI5LQ96CN4 794 aa15.09■□□□□ 0.01
SMAD3-204ENST00000540846 ZNF219Q9P2Y4 722 aaPredicted RBP15.09■□□□□ 0.01
SMAD3-204ENST00000540846 PSME4Q14997 1843 aa15.09■□□□□ 0.01
SMAD3-204ENST00000540846 MYH7P12883 1935 aa15.09■□□□□ 0.01
SMAD3-204ENST00000540846 SCN9AQ15858 1988 aa15.09■□□□□ 0.01
SMAD3-204ENST00000540846 KCNJ4P48050 445 aa15.08■□□□□ 0
SMAD3-204ENST00000540846 CCDC93Q567U6 631 aa15.08■□□□□ 0
SMAD3-204ENST00000540846 DPP8Q6V1X1 898 aaPredicted RBP15.08■□□□□ 0
SMAD3-204ENST00000540846 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.08■□□□□ 0
SMAD3-204ENST00000540846 WWC3Q9ULE0 1092 aa15.08■□□□□ 0
SMAD3-204ENST00000540846 SGSM2O43147 1006 aa15.07■□□□□ 0
SMAD3-204ENST00000540846 MCAMP43121 646 aa15.07■□□□□ 0
SMAD3-204ENST00000540846 RFX7Q2KHR2 1363 aa15.07■□□□□ 0
SMAD3-204ENST00000540846 CCDC88AQ3V6T2 1871 aa15.07■□□□□ 0
SMAD3-204ENST00000540846 RASGRF1Q13972 1273 aa15.07■□□□□ 0
SMAD3-204ENST00000540846 GRIPAP1Q4V328 841 aa15.07■□□□□ 0
SMAD3-204ENST00000540846 CCDC158Q5M9N0 1113 aa15.07■□□□□ 0
SMAD3-204ENST00000540846 PI16Q6UXB8 463 aa15.07■□□□□ 0
SMAD3-204ENST00000540846 IL17RAQ96F46 866 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms