RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 AKAP11Q9UKA4 1901 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 K7ELQ4 463 aaPredicted RBP11.5□□□□□ -0.57
PAAF1-209ENST00000540659 SNAP23O00161 211 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 ST18O60284 1047 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 GYS1P13807 737 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 ZAP70P43403 619 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 KCNJ4P48050 445 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 CHRNDQ07001 517 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 SCARF1Q14162 830 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 SLFNL1Q499Z3 407 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 SLC10A5Q5PT55 438 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 PI16Q6UXB8 463 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 CCDC129Q6ZRS4 1044 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 KBTBD3Q8NAB2 608 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 LPIN2Q92539 896 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 SEC62Q99442 399 aaKnown RBP11.5□□□□□ -0.57
PAAF1-209ENST00000540659 ANP32EQ9BTT0 268 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 FHDC1Q9C0D6 1143 aaPredicted RBP11.5□□□□□ -0.57
PAAF1-209ENST00000540659 CCDC171Q6TFL3 1326 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 RFX7Q2KHR2 1363 aa11.5□□□□□ -0.57
PAAF1-209ENST00000540659 HSP90AA1P07900 732 aaKnown RBP11.49□□□□□ -0.57
PAAF1-209ENST00000540659 FGFR2P21802 821 aa11.49□□□□□ -0.57
PAAF1-209ENST00000540659 PHKA1P46020 1223 aa11.49□□□□□ -0.57
PAAF1-209ENST00000540659 PRPF40BQ6NWY9 871 aaKnown RBP11.49□□□□□ -0.57
PAAF1-209ENST00000540659 NOL8Q76FK4 1167 aaKnown RBP11.49□□□□□ -0.57
PAAF1-209ENST00000540659 ZNF589Q86UQ0 364 aaPredicted RBP11.49□□□□□ -0.57
PAAF1-209ENST00000540659 CELF1Q92879 486 aaKnown RBP11.49□□□□□ -0.57
PAAF1-209ENST00000540659 RBM8AQ9Y5S9 174 aaKnown RBP11.49□□□□□ -0.57
PAAF1-209ENST00000540659 SNX14Q9Y5W7 946 aa11.49□□□□□ -0.57
PAAF1-209ENST00000540659 MED23Q9ULK4 1368 aa11.49□□□□□ -0.57
PAAF1-209ENST00000540659 KIAA1551Q9HCM1 1747 aa11.49□□□□□ -0.57
PAAF1-209ENST00000540659 EPB41L2O43491 1005 aaKnown RBP11.48□□□□□ -0.57
PAAF1-209ENST00000540659 MMP10P09238 476 aa11.48□□□□□ -0.57
PAAF1-209ENST00000540659 MCAMP43121 646 aa11.48□□□□□ -0.57
PAAF1-209ENST00000540659 NEK4P51957 841 aa11.48□□□□□ -0.57
PAAF1-209ENST00000540659 ANAPC15P60006 121 aa11.48□□□□□ -0.57
PAAF1-209ENST00000540659 MCMDC2Q4G0Z9 681 aa11.48□□□□□ -0.57
PAAF1-209ENST00000540659 CCDC102BQ68D86 513 aa11.48□□□□□ -0.57
PAAF1-209ENST00000540659 KLHL34Q8N239 644 aa11.48□□□□□ -0.57
PAAF1-209ENST00000540659 CNBD1Q8NA66 436 aa11.48□□□□□ -0.57
PAAF1-209ENST00000540659 NRXN2Q9P2S2 1712 aa11.48□□□□□ -0.57
PAAF1-209ENST00000540659 DOCK2Q92608 1830 aa11.48□□□□□ -0.57
PAAF1-209ENST00000540659 MYH13Q9UKX3 1938 aa11.48□□□□□ -0.57
PAAF1-209ENST00000540659 C10orf71Q711Q0 1435 aa11.47□□□□□ -0.57
PAAF1-209ENST00000540659 RNF113AO15541 343 aaKnown RBP11.47□□□□□ -0.57
PAAF1-209ENST00000540659 SERPINB2P05120 415 aa11.47□□□□□ -0.57
PAAF1-209ENST00000540659 UQCRFS1P1P0C7P4 283 aa11.47□□□□□ -0.57
PAAF1-209ENST00000540659 ST5P78524 1137 aa11.47□□□□□ -0.57
PAAF1-209ENST00000540659 PRR5LQ6MZQ0 368 aa11.47□□□□□ -0.57
PAAF1-209ENST00000540659 UPF3BQ9BZI7 483 aaKnown RBP11.47□□□□□ -0.57
PAAF1-209ENST00000540659 GOLGB1Q14789 3259 aaKnown RBP11.46□□□□□ -0.57
PAAF1-209ENST00000540659 M0R2C6 588 aa11.46□□□□□ -0.57
PAAF1-209ENST00000540659 ARID4AP29374 1257 aaPredicted RBP11.46□□□□□ -0.57
PAAF1-209ENST00000540659 WASHC4Q2M389 1173 aa11.46□□□□□ -0.57
PAAF1-209ENST00000540659 CREB3L3Q68CJ9 461 aa11.46□□□□□ -0.57
PAAF1-209ENST00000540659 RASEFQ8IZ41 740 aa11.46□□□□□ -0.57
PAAF1-209ENST00000540659 NLGN1Q8N2Q7 840 aa11.46□□□□□ -0.57
PAAF1-209ENST00000540659 MAP4K1Q92918 833 aa11.46□□□□□ -0.57
PAAF1-209ENST00000540659 SYT17Q9BSW7 474 aa11.46□□□□□ -0.57
PAAF1-209ENST00000540659 HELLSQ9NRZ9 838 aa11.46□□□□□ -0.57
PAAF1-209ENST00000540659 BSDC1Q9NW68 430 aaPredicted RBP11.46□□□□□ -0.57
PAAF1-209ENST00000540659 LAMA4Q16363 1823 aa11.46□□□□□ -0.58
PAAF1-209ENST00000540659 MAST3O60307 1309 aa11.45□□□□□ -0.58
PAAF1-209ENST00000540659 SLC27A2O14975 620 aa11.45□□□□□ -0.58
PAAF1-209ENST00000540659 CYP2E1P05181 493 aaPredicted RBP11.45□□□□□ -0.58
PAAF1-209ENST00000540659 CPA1P15085 419 aa11.45□□□□□ -0.58
PAAF1-209ENST00000540659 TM4SF1P30408 202 aa11.45□□□□□ -0.58
PAAF1-209ENST00000540659 BCAMP50895 628 aa11.45□□□□□ -0.58
PAAF1-209ENST00000540659 RPS8P62241 208 aaKnown RBP11.45□□□□□ -0.58
PAAF1-209ENST00000540659 DDR1Q08345 913 aa11.45□□□□□ -0.58
PAAF1-209ENST00000540659 LRRFIP1Q32MZ4 808 aaKnown RBP11.45□□□□□ -0.58
PAAF1-209ENST00000540659 ZMYM1Q5SVZ6 1142 aa11.45□□□□□ -0.58
PAAF1-209ENST00000540659 TICAM2Q86XR7 235 aa11.45□□□□□ -0.58
PAAF1-209ENST00000540659 NLGN2Q8NFZ4 835 aa11.45□□□□□ -0.58
PAAF1-209ENST00000540659 JAKMIP1Q96N16 626 aaKnown RBP11.45□□□□□ -0.58
PAAF1-209ENST00000540659 PIH1D3Q9NQM4 214 aaKnown RBP11.45□□□□□ -0.58
PAAF1-209ENST00000540659 MINPP1Q9UNW1 487 aa11.45□□□□□ -0.58
PAAF1-209ENST00000540659 IQSEC3Q9UPP2 1182 aaPredicted RBP11.45□□□□□ -0.58
PAAF1-209ENST00000540659 CACNA1SQ13698 1873 aa11.44□□□□□ -0.58
PAAF1-209ENST00000540659 ANKRD31Q8N7Z5 1873 aa11.44□□□□□ -0.58
PAAF1-209ENST00000540659 WTIPA6NIX2 430 aaPredicted RBP11.44□□□□□ -0.58
PAAF1-209ENST00000540659 IDH1O75874 414 aaKnown RBP11.44□□□□□ -0.58
PAAF1-209ENST00000540659 CASTP20810 708 aaKnown RBP11.44□□□□□ -0.58
PAAF1-209ENST00000540659 GYG1P46976 350 aa11.44□□□□□ -0.58
PAAF1-209ENST00000540659 NECTIN1Q15223 517 aa11.44□□□□□ -0.58
PAAF1-209ENST00000540659 TTF1Q15361 905 aaPredicted RBP11.44□□□□□ -0.58
PAAF1-209ENST00000540659 ADCK5Q3MIX3 580 aa11.44□□□□□ -0.58
PAAF1-209ENST00000540659 SPATA5Q8NB90 893 aa11.44□□□□□ -0.58
PAAF1-209ENST00000540659 RPGRQ92834 1020 aaKnown RBP11.44□□□□□ -0.58
PAAF1-209ENST00000540659 ZNF512BQ96KM6 892 aaPredicted RBP11.44□□□□□ -0.58
PAAF1-209ENST00000540659 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.44□□□□□ -0.58
PAAF1-209ENST00000540659 HMG20BQ9P0W2 317 aa11.44□□□□□ -0.58
PAAF1-209ENST00000540659 BRCA1P38398 1863 aaKnown RBP11.44□□□□□ -0.58
PAAF1-209ENST00000540659 POLRMTO00411 1230 aaKnown RBP11.43□□□□□ -0.58
PAAF1-209ENST00000540659 ZFYP08048 801 aaPredicted RBP11.43□□□□□ -0.58
PAAF1-209ENST00000540659 ZKSCAN1P17029 563 aaPredicted RBP11.43□□□□□ -0.58
PAAF1-209ENST00000540659 RASGRF1Q13972 1273 aa11.43□□□□□ -0.58
PAAF1-209ENST00000540659 VPS53Q5VIR6 699 aa11.43□□□□□ -0.58
PAAF1-209ENST00000540659 RNF20Q5VTR2 975 aa11.43□□□□□ -0.58
PAAF1-209ENST00000540659 ZSCAN25Q6NSZ9 544 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms