RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 BBOX1O75936 387 aa14.52□□□□□ -0.09
TMEM258-205ENST00000540434 EN2P19622 333 aaPredicted RBP14.52□□□□□ -0.09
TMEM258-205ENST00000540434 RARSP54136 660 aaKnown RBP14.52□□□□□ -0.09
TMEM258-205ENST00000540434 MKRN3Q13064 507 aaKnown RBP14.52□□□□□ -0.09
TMEM258-205ENST00000540434 GCKRQ14397 625 aa14.52□□□□□ -0.09
TMEM258-205ENST00000540434 CDCA5Q96FF9 252 aa14.52□□□□□ -0.09
TMEM258-205ENST00000540434 CCDC85AQ96PX6 553 aaPredicted RBP14.52□□□□□ -0.09
TMEM258-205ENST00000540434 TNNQ9UQP3 1299 aa14.52□□□□□ -0.09
TMEM258-205ENST00000540434 ZBED9Q6R2W3 1325 aa14.51□□□□□ -0.09
TMEM258-205ENST00000540434 TRIOBPQ9H2D6 2365 aa14.51□□□□□ -0.09
TMEM258-205ENST00000540434 BCAR3O75815 825 aa14.51□□□□□ -0.09
TMEM258-205ENST00000540434 SF3B3Q15393 1217 aaKnown RBP14.51□□□□□ -0.09
TMEM258-205ENST00000540434 CELF1Q92879 486 aaKnown RBP14.51□□□□□ -0.09
TMEM258-205ENST00000540434 TMX4Q9H1E5 349 aaPredicted RBP14.51□□□□□ -0.09
TMEM258-205ENST00000540434 SEC31BQ9NQW1 1179 aa14.51□□□□□ -0.09
TMEM258-205ENST00000540434 KCNQ5Q9NR82 932 aa14.51□□□□□ -0.09
TMEM258-205ENST00000540434 SCAF8Q9UPN6 1271 aaKnown RBP14.51□□□□□ -0.09
TMEM258-205ENST00000540434 LRRC37AA6NMS7 1700 aa14.5□□□□□ -0.09
TMEM258-205ENST00000540434 ALDH1L2Q3SY69 923 aa14.5□□□□□ -0.09
TMEM258-205ENST00000540434 SLC4A10Q6U841 1118 aa14.5□□□□□ -0.09
TMEM258-205ENST00000540434 UBE3BQ7Z3V4 1068 aa14.5□□□□□ -0.09
TMEM258-205ENST00000540434 LINS1Q8NG48 757 aa14.5□□□□□ -0.09
TMEM258-205ENST00000540434 SMC4Q9NTJ3 1288 aa14.5□□□□□ -0.09
TMEM258-205ENST00000540434 GGA3Q9NZ52 723 aa14.5□□□□□ -0.09
TMEM258-205ENST00000540434 NOB1Q9ULX3 412 aaKnown RBP14.5□□□□□ -0.09
TMEM258-205ENST00000540434 A0A0C4DFX4 3053 aa14.5□□□□□ -0.09
TMEM258-205ENST00000540434 SCN9AQ15858 1988 aa14.49□□□□□ -0.09
TMEM258-205ENST00000540434 NEXNQ0ZGT2 675 aa14.49□□□□□ -0.09
TMEM258-205ENST00000540434 EPHA10Q5JZY3 1008 aa14.49□□□□□ -0.09
TMEM258-205ENST00000540434 UBE2Q2LH0YL09 131 aa14.48□□□□□ -0.09
TMEM258-205ENST00000540434 FKTNO75072 461 aa14.48□□□□□ -0.09
TMEM258-205ENST00000540434 REM2Q8IYK8 340 aaPredicted RBP14.48□□□□□ -0.09
TMEM258-205ENST00000540434 TTLL11Q8NHH1 800 aa14.48□□□□□ -0.09
TMEM258-205ENST00000540434 DBNDD1Q9H9R9 158 aa14.48□□□□□ -0.09
TMEM258-205ENST00000540434 PDE8AO60658 829 aa14.47□□□□□ -0.09
TMEM258-205ENST00000540434 KIF4BQ2VIQ3 1234 aa14.47□□□□□ -0.09
TMEM258-205ENST00000540434 SULF1Q8IWU6 871 aa14.47□□□□□ -0.09
TMEM258-205ENST00000540434 KAZALD1Q96I82 304 aa14.47□□□□□ -0.09
TMEM258-205ENST00000540434 TRIM17Q9Y577 477 aa14.47□□□□□ -0.09
TMEM258-205ENST00000540434 COL6A3P12111 3177 aa14.46□□□□□ -0.09
TMEM258-205ENST00000540434 WTIPA6NIX2 430 aaPredicted RBP14.46□□□□□ -0.09
TMEM258-205ENST00000540434 RIMBP2O15034 1052 aa14.46□□□□□ -0.09
TMEM258-205ENST00000540434 CT47B1P0C2W7 299 aaPredicted RBP14.46□□□□□ -0.09
TMEM258-205ENST00000540434 NBPF7P0C2Y1 421 aaPredicted RBP14.46□□□□□ -0.09
TMEM258-205ENST00000540434 FOXO4P98177 505 aa14.46□□□□□ -0.09
TMEM258-205ENST00000540434 GRAPQ13588 217 aa14.46□□□□□ -0.09
TMEM258-205ENST00000540434 PRAMEF18Q5VWM3 479 aa14.46□□□□□ -0.09
TMEM258-205ENST00000540434 DDX46Q7L014 1031 aaKnown RBP14.46□□□□□ -0.09
TMEM258-205ENST00000540434 GRAPLQ8TC17 118 aaPredicted RBP14.46□□□□□ -0.09
TMEM258-205ENST00000540434 OTUD5Q96G74 571 aa14.46□□□□□ -0.09
TMEM258-205ENST00000540434 GREM2Q9H772 168 aa14.46□□□□□ -0.09
TMEM258-205ENST00000540434 KIAA0100Q14667 2235 aaKnown RBP14.46□□□□□ -0.1
TMEM258-205ENST00000540434 RTL9Q8NET4 1388 aa14.46□□□□□ -0.1
TMEM258-205ENST00000540434 PTPRCP08575 1304 aa14.45□□□□□ -0.1
TMEM258-205ENST00000540434 H0YGN5 161 aa14.45□□□□□ -0.1
TMEM258-205ENST00000540434 RPS12P25398 132 aaKnown RBP14.45□□□□□ -0.1
TMEM258-205ENST00000540434 TM4SF4P48230 202 aa14.45□□□□□ -0.1
TMEM258-205ENST00000540434 CHRDL2Q6WN34 429 aa14.45□□□□□ -0.1
TMEM258-205ENST00000540434 MYH3P11055 1940 aa14.45□□□□□ -0.1
TMEM258-205ENST00000540434 CSF1RP07333 972 aa14.44□□□□□ -0.1
TMEM258-205ENST00000540434 CTSWP56202 376 aa14.44□□□□□ -0.1
TMEM258-205ENST00000540434 DOK7Q18PE1 504 aa14.44□□□□□ -0.1
TMEM258-205ENST00000540434 WASHC4Q2M389 1173 aa14.44□□□□□ -0.1
TMEM258-205ENST00000540434 ANGEL2Q5VTE6 544 aaKnown RBP14.44□□□□□ -0.1
TMEM258-205ENST00000540434 OTOP1Q7RTM1 612 aa14.44□□□□□ -0.1
TMEM258-205ENST00000540434 SUCLG2Q96I99 432 aa14.44□□□□□ -0.1
TMEM258-205ENST00000540434 PLA2G12BQ9BX93 195 aa14.44□□□□□ -0.1
TMEM258-205ENST00000540434 SRCIN1Q9C0H9 1055 aa14.44□□□□□ -0.1
TMEM258-205ENST00000540434 USP44Q9H0E7 712 aa14.44□□□□□ -0.1
TMEM258-205ENST00000540434 CEP290O15078 2479 aa14.43□□□□□ -0.1
TMEM258-205ENST00000540434 GRM8O00222 908 aa14.43□□□□□ -0.1
TMEM258-205ENST00000540434 ALDH1L1O75891 902 aa14.43□□□□□ -0.1
TMEM258-205ENST00000540434 RPS8P62241 208 aaKnown RBP14.43□□□□□ -0.1
TMEM258-205ENST00000540434 NOM1Q5C9Z4 860 aaKnown RBP14.43□□□□□ -0.1
TMEM258-205ENST00000540434 INTS3Q68E01 1043 aaKnown RBP14.43□□□□□ -0.1
TMEM258-205ENST00000540434 POLLQ9UGP5 575 aa14.43□□□□□ -0.1
TMEM258-205ENST00000540434 PSME4Q14997 1843 aa14.43□□□□□ -0.1
TMEM258-205ENST00000540434 CUL9Q8IWT3 2517 aa14.43□□□□□ -0.1
TMEM258-205ENST00000540434 VIL1P09327 827 aaKnown RBP14.42□□□□□ -0.1
TMEM258-205ENST00000540434 SCARF1Q14162 830 aa14.42□□□□□ -0.1
TMEM258-205ENST00000540434 SPEF2Q9C093 1822 aa14.42□□□□□ -0.1
TMEM258-205ENST00000540434 RBBP6Q7Z6E9 1792 aaKnown RBP14.42□□□□□ -0.1
TMEM258-205ENST00000540434 UTYO14607 1347 aa14.41□□□□□ -0.1
TMEM258-205ENST00000540434 RANBP2P49792 3224 aaKnown RBP14.41□□□□□ -0.1
TMEM258-205ENST00000540434 ECE2O60344 883 aa14.41□□□□□ -0.1
TMEM258-205ENST00000540434 FKBP1BP68106 108 aa14.41□□□□□ -0.1
TMEM258-205ENST00000540434 GPSM2P81274 684 aa14.41□□□□□ -0.1
TMEM258-205ENST00000540434 CCDC152Q4G0S7 254 aa14.41□□□□□ -0.1
TMEM258-205ENST00000540434 TMC4Q7Z404 712 aa14.41□□□□□ -0.1
TMEM258-205ENST00000540434 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.41□□□□□ -0.1
TMEM258-205ENST00000540434 RBM27Q9P2N5 1060 aaKnown RBP14.41□□□□□ -0.1
TMEM258-205ENST00000540434 TRIM27P14373 513 aa14.4□□□□□ -0.1
TMEM258-205ENST00000540434 CAP1Q01518 475 aa14.4□□□□□ -0.1
TMEM258-205ENST00000540434 TTLL12Q14166 644 aaPredicted RBP14.4□□□□□ -0.1
TMEM258-205ENST00000540434 LMBR1LQ6UX01 489 aa14.4□□□□□ -0.1
TMEM258-205ENST00000540434 ANKRD44Q8N8A2 993 aa14.4□□□□□ -0.1
TMEM258-205ENST00000540434 FRAT1Q92837 279 aaPredicted RBP14.4□□□□□ -0.1
TMEM258-205ENST00000540434 ZNF594Q96JF6 807 aaPredicted RBP14.4□□□□□ -0.1
TMEM258-205ENST00000540434 C9orf78Q9NZ63 289 aaPredicted RBP14.4□□□□□ -0.1
TMEM258-205ENST00000540434 NSFL1CQ9UNZ2 370 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms