RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 IPO8O15397 1037 aaKnown RBP18.91■□□□□ 0.62
UBE3B-212ENST00000540230 ITGBL1O95965 494 aaPredicted RBP18.91■□□□□ 0.62
UBE3B-212ENST00000540230 EGFRP00533 1210 aa18.91■□□□□ 0.62
UBE3B-212ENST00000540230 RFX5P48382 616 aaPredicted RBP18.91■□□□□ 0.62
UBE3B-212ENST00000540230 HIRAP54198 1017 aaPredicted RBP18.91■□□□□ 0.62
UBE3B-212ENST00000540230 PODNQ7Z5L7 613 aa18.91■□□□□ 0.62
UBE3B-212ENST00000540230 RIPOR2Q9Y4F9 1068 aa18.91■□□□□ 0.62
UBE3B-212ENST00000540230 LRRFIP2Q9Y608 721 aaKnown RBP18.91■□□□□ 0.62
UBE3B-212ENST00000540230 PASKQ96RG2 1323 aa18.91■□□□□ 0.62
UBE3B-212ENST00000540230 DPF2Q92785 391 aa18.9■□□□□ 0.62
UBE3B-212ENST00000540230 MXD3Q9BW11 206 aa18.9■□□□□ 0.62
UBE3B-212ENST00000540230 COA1Q9GZY4 146 aa18.9■□□□□ 0.62
UBE3B-212ENST00000540230 FMR1Q06787 632 aaKnown RBP eCLIP18.9■□□□□ 0.62
UBE3B-212ENST00000540230 ZKSCAN2Q63HK3 967 aa18.9■□□□□ 0.62
UBE3B-212ENST00000540230 RSBN1LQ6PCB5 846 aaPredicted RBP18.9■□□□□ 0.62
UBE3B-212ENST00000540230 SAMD7Q7Z3H4 446 aa18.9■□□□□ 0.62
UBE3B-212ENST00000540230 CNTROBQ8N137 903 aa18.9■□□□□ 0.62
UBE3B-212ENST00000540230 RPS12P25398 132 aaKnown RBP18.89■□□□□ 0.61
UBE3B-212ENST00000540230 TMEM57Q8N5G2 664 aa18.89■□□□□ 0.61
UBE3B-212ENST00000540230 ZNF609O15014 1411 aa18.88■□□□□ 0.61
UBE3B-212ENST00000540230 USP17L3A6NCW0 530 aa18.88■□□□□ 0.61
UBE3B-212ENST00000540230 USP17L4A6NCW7 530 aa18.88■□□□□ 0.61
UBE3B-212ENST00000540230 PTPN12Q05209 780 aaKnown RBP18.88■□□□□ 0.61
UBE3B-212ENST00000540230 TBC1D10BQ4KMP7 808 aaPredicted RBP18.88■□□□□ 0.61
UBE3B-212ENST00000540230 C15orf52Q6ZUT6 534 aaKnown RBP18.88■□□□□ 0.61
UBE3B-212ENST00000540230 USP17L1Q7RTZ2 530 aa18.88■□□□□ 0.61
UBE3B-212ENST00000540230 DNAJC5GQ8N7S2 189 aa18.88■□□□□ 0.61
UBE3B-212ENST00000540230 GMLQ99445 158 aa18.88■□□□□ 0.61
UBE3B-212ENST00000540230 CD209Q9NNX6 404 aa18.88■□□□□ 0.61
UBE3B-212ENST00000540230 PCNTO95613 3336 aa18.88■□□□□ 0.61
UBE3B-212ENST00000540230 H7C1D1 291 aa18.87■□□□□ 0.61
UBE3B-212ENST00000540230 RLBP1P12271 317 aa18.87■□□□□ 0.61
UBE3B-212ENST00000540230 DACT2Q5SW24 774 aa18.87■□□□□ 0.61
UBE3B-212ENST00000540230 VGLL2Q8N8G2 317 aa18.87■□□□□ 0.61
UBE3B-212ENST00000540230 FBXW7Q969H0 707 aa18.86■□□□□ 0.61
UBE3B-212ENST00000540230 MROH5Q6ZUA9 1318 aa18.86■□□□□ 0.61
UBE3B-212ENST00000540230 METTL24Q5JXM2 366 aa18.85■□□□□ 0.61
UBE3B-212ENST00000540230 RBM26Q5T8P6 1007 aaKnown RBP18.85■□□□□ 0.61
UBE3B-212ENST00000540230 AGBL3Q8NEM8 1001 aa18.85■□□□□ 0.61
UBE3B-212ENST00000540230 TRAF5O00463 557 aa18.84■□□□□ 0.61
UBE3B-212ENST00000540230 GNAI3P08754 354 aa18.84■□□□□ 0.61
UBE3B-212ENST00000540230 GTF2IP78347 998 aa18.84■□□□□ 0.61
UBE3B-212ENST00000540230 UBE4AQ14139 1066 aa18.84■□□□□ 0.61
UBE3B-212ENST00000540230 STRIP1Q5VSL9 837 aa18.84■□□□□ 0.61
UBE3B-212ENST00000540230 PGAP2Q9UHJ9 254 aa18.84■□□□□ 0.61
UBE3B-212ENST00000540230 PA2G4Q9UQ80 394 aaKnown RBP18.84■□□□□ 0.61
UBE3B-212ENST00000540230 EYA2O00167 538 aa18.84■□□□□ 0.61
UBE3B-212ENST00000540230 GYG1P46976 350 aa18.84■□□□□ 0.61
UBE3B-212ENST00000540230 TTLL5Q6EMB2 1281 aa18.84■□□□□ 0.61
UBE3B-212ENST00000540230 ATG9AQ7Z3C6 839 aa18.84■□□□□ 0.61
UBE3B-212ENST00000540230 GLIS2Q9BZE0 524 aaPredicted RBP18.84■□□□□ 0.61
UBE3B-212ENST00000540230 SIL1Q9H173 461 aa18.84■□□□□ 0.61
UBE3B-212ENST00000540230 ASTN2O75129 1339 aaPredicted RBP18.83■□□□□ 0.61
UBE3B-212ENST00000540230 POLR2AP24928 1970 aaKnown RBP18.83■□□□□ 0.61
UBE3B-212ENST00000540230 PDE8BO95263 885 aa18.83■□□□□ 0.6
UBE3B-212ENST00000540230 IL1R1P14778 569 aa18.83■□□□□ 0.6
UBE3B-212ENST00000540230 ZNF280AP59817 542 aaPredicted RBP18.83■□□□□ 0.6
UBE3B-212ENST00000540230 KIF4BQ2VIQ3 1234 aa18.83■□□□□ 0.6
UBE3B-212ENST00000540230 ZNF804AQ7Z570 1209 aa18.83■□□□□ 0.6
UBE3B-212ENST00000540230 JAG2Q9Y219 1238 aa18.83■□□□□ 0.6
UBE3B-212ENST00000540230 DLK2Q6UY11 383 aa18.82■□□□□ 0.6
UBE3B-212ENST00000540230 DZIP1LQ8IYY4 767 aaKnown RBP18.82■□□□□ 0.6
UBE3B-212ENST00000540230 CERS5Q8N5B7 392 aa18.82■□□□□ 0.6
UBE3B-212ENST00000540230 FAM84BQ96KN1 310 aaPredicted RBP18.82■□□□□ 0.6
UBE3B-212ENST00000540230 CREBZFQ9NS37 354 aa18.82■□□□□ 0.6
UBE3B-212ENST00000540230 TRPM7Q96QT4 1865 aa18.82■□□□□ 0.6
UBE3B-212ENST00000540230 USP17L8P0C7I0 530 aa18.81■□□□□ 0.6
UBE3B-212ENST00000540230 FTSJ3Q8IY81 847 aaKnown RBP18.81■□□□□ 0.6
UBE3B-212ENST00000540230 ZC3H15Q8WU90 426 aaKnown RBP18.81■□□□□ 0.6
UBE3B-212ENST00000540230 FGFR2P21802 821 aa18.8■□□□□ 0.6
UBE3B-212ENST00000540230 MTX1Q13505 466 aa18.8■□□□□ 0.6
UBE3B-212ENST00000540230 PANK1Q8TE04 598 aa18.8■□□□□ 0.6
UBE3B-212ENST00000540230 KLRG1Q96E93 195 aa18.8■□□□□ 0.6
UBE3B-212ENST00000540230 MYOZ2Q9NPC6 264 aa18.8■□□□□ 0.6
UBE3B-212ENST00000540230 HDAC5Q9UQL6 1122 aa18.8■□□□□ 0.6
UBE3B-212ENST00000540230 TMEM88BA6NKF7 163 aa18.79■□□□□ 0.6
UBE3B-212ENST00000540230 SRGAP3O43295 1099 aa18.79■□□□□ 0.6
UBE3B-212ENST00000540230 GNAI2P04899 355 aa18.79■□□□□ 0.6
UBE3B-212ENST00000540230 HIBADHP31937 336 aaKnown RBP18.79■□□□□ 0.6
UBE3B-212ENST00000540230 KIAA0825Q8IV33 1275 aa18.79■□□□□ 0.6
UBE3B-212ENST00000540230 ITPRIPQ8IWB1 547 aa18.79■□□□□ 0.6
UBE3B-212ENST00000540230 C1orf115Q9H7X2 142 aa18.79■□□□□ 0.6
UBE3B-212ENST00000540230 COPRSQ9NQ92 184 aa18.79■□□□□ 0.6
UBE3B-212ENST00000540230 MYO3BQ8WXR4 1341 aa18.79■□□□□ 0.6
UBE3B-212ENST00000540230 PNMA6EA0A0J9YXQ4 647 aa18.79■□□□□ 0.6
UBE3B-212ENST00000540230 CST9Q5W186 159 aa18.79■□□□□ 0.6
UBE3B-212ENST00000540230 TDRD7Q8NHU6 1098 aaKnown RBP18.79■□□□□ 0.6
UBE3B-212ENST00000540230 GGA3Q9NZ52 723 aa18.79■□□□□ 0.6
UBE3B-212ENST00000540230 IQSEC3Q9UPP2 1182 aaPredicted RBP18.79■□□□□ 0.6
UBE3B-212ENST00000540230 CIAO1O76071 339 aa18.78■□□□□ 0.6
UBE3B-212ENST00000540230 PUM3Q15397 648 aaKnown RBP18.78■□□□□ 0.6
UBE3B-212ENST00000540230 FBXO33Q7Z6M2 555 aa18.78■□□□□ 0.6
UBE3B-212ENST00000540230 MKRN1Q9UHC7 482 aaKnown RBP18.78■□□□□ 0.6
UBE3B-212ENST00000540230 RCAN3Q9UKA8 241 aa18.78■□□□□ 0.6
UBE3B-212ENST00000540230 ADM5C9JUS6 153 aa18.77■□□□□ 0.6
UBE3B-212ENST00000540230 ZBTB7BO15156 539 aaPredicted RBP18.77■□□□□ 0.6
UBE3B-212ENST00000540230 BCAMP50895 628 aa18.77■□□□□ 0.6
UBE3B-212ENST00000540230 SCARF1Q14162 830 aa18.77■□□□□ 0.6
UBE3B-212ENST00000540230 CDC37L1Q7L3B6 337 aa18.77■□□□□ 0.6
UBE3B-212ENST00000540230 USP48Q86UV5 1035 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms