RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 SPC24Q8NBT2 197 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 LZICQ8WZA0 190 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 ARHGAP45Q92619 1136 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 P3H4Q92791 437 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 GOLGA1Q92805 767 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 RSRC1Q96IZ7 334 aaKnown RBP7.06□□□□□ -1.28
SNHG1-211ENST00000539921 SLX1AQ9BQ83 275 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 JPH2Q9BR39 696 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-211ENST00000539921 NUP62CLQ9H1M0 184 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 SUN2Q9UH99 717 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 BLOC1S6Q9UL45 172 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 HECW2Q9P2P5 1572 aa7.06□□□□□ -1.28
SNHG1-211ENST00000539921 MYO5CQ9NQX4 1742 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 PTCH1Q13635 1447 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 SHTN1A0MZ66 631 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 ERICH2A1L162 156 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 H3BQF6 201 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 ZSCAN9O15535 394 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-211ENST00000539921 MYO1BO43795 1136 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 ZSCAN22P10073 491 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-211ENST00000539921 CD44P16070 742 aaKnown RBP7.05□□□□□ -1.28
SNHG1-211ENST00000539921 ALDH1B1P30837 517 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 GCKP35557 465 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 CCNHP51946 323 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-211ENST00000539921 EVCP57679 992 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 ROR2Q01974 943 aaKnown RBP7.05□□□□□ -1.28
SNHG1-211ENST00000539921 DEUP1Q05D60 604 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 SPATA21Q7Z572 469 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 LUZP1Q86V48 1076 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 EXOC8Q8IYI6 725 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 C3orf20Q8ND61 904 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 RUNDC1Q96C34 613 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 PPP1R13BQ96KQ4 1090 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 TRIM7Q9C029 511 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 ACTR5Q9H9F9 607 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-211ENST00000539921 TRPV5Q9NQA5 729 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 INCENPQ9NQS7 918 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 RGL1Q9NZL6 768 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 VPS18Q9P253 973 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 CORO1CQ9ULV4 474 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-211ENST00000539921 SYNPO2Q9UMS6 1093 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 FAM169AQ9Y6X4 670 aa7.05□□□□□ -1.28
SNHG1-211ENST00000539921 CCDC69A6NI79 296 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 ZSCAN12O43309 604 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 PPP1R37O75864 691 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 RASSF9O75901 435 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 KIAA0754O94854 1291 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 FAM163BP0C2L3 166 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 FERP16591 822 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 AMPHP49418 695 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 CLNS1AP54105 237 aaKnown RBP7.04□□□□□ -1.28
SNHG1-211ENST00000539921 SH3BGRP55822 239 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-211ENST00000539921 MAP3K9P80192 1104 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 BEND6Q5SZJ8 279 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-211ENST00000539921 TTC22Q5TAA0 569 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 LMOD2Q6P5Q4 547 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 CRELD2Q6UXH1 353 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-211ENST00000539921 TTLL7Q6ZT98 887 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 GBP7Q8N8V2 638 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-211ENST00000539921 CNNM3Q8NE01 707 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 CCHCR1Q8TD31 782 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 AFAP1L1Q8TED9 768 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 LEO1Q8WVC0 666 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-211ENST00000539921 RUBCNQ92622 972 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 CCDC47Q96A33 483 aaKnown RBP7.04□□□□□ -1.28
SNHG1-211ENST00000539921 PPP1R14BQ96C90 147 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 ZNF396Q96N95 335 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-211ENST00000539921 ALS2CR12Q96Q35 445 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 CBX8Q9HC52 389 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 ABCF2Q9UG63 623 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 L1RE1Q9UN81 338 aa7.04□□□□□ -1.28
SNHG1-211ENST00000539921 GOLGA6L7A0A1B0GV03 622 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 GADD45BO75293 160 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-211ENST00000539921 LUC7L3O95232 432 aaKnown RBP7.03□□□□□ -1.28
SNHG1-211ENST00000539921 TRIM27P14373 513 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 CDR1P51861 262 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 RBM5P52756 815 aaKnown RBP eCLIP7.03□□□□□ -1.28
SNHG1-211ENST00000539921 KIAA0753Q2KHM9 967 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 CCDC57Q2TAC2 916 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 CEP85LQ5SZL2 805 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 E4F1Q66K89 784 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-211ENST00000539921 KLHL10Q6JEL2 608 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 ARMCX6Q7L4S7 300 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 FAM81AQ8TBF8 368 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 C17orf50Q8WW18 174 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 SRCIN1Q9C0H9 1055 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 MAF1Q9H063 256 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 CLSTN2Q9H4D0 955 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 SLC24A3Q9HC58 644 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.03□□□□□ -1.28
SNHG1-211ENST00000539921 FAN1Q9Y2M0 1017 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 MRFAP1Q9Y605 127 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 PARP3Q9Y6F1 533 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 TTC37Q6PGP7 1564 aa7.03□□□□□ -1.28
SNHG1-211ENST00000539921 TRAPPC8Q9Y2L5 1435 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 LMTK2Q8IWU2 1503 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 SENP3-EIF4A1A0A087X0R7 540 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 GOLGA6L19H0YKK7 550 aa7.02□□□□□ -1.29
SNHG1-211ENST00000539921 MEFVO15553 781 aaPredicted RBP7.02□□□□□ -1.29
SNHG1-211ENST00000539921 GIGYF1O75420 1035 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms