RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 LINS1Q8NG48 757 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 TTC41PQ6P2S7 1318 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 HLA-DOAP06340 250 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 CPA1P15085 419 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 CREB3L3Q68CJ9 461 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 PLCD4Q9BRC7 762 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 ZKSCAN5Q9Y2L8 839 aa16.67■□□□□ 0.26
CACNB1-206ENST00000539338 FGFR1OPO95684 399 aaKnown RBP16.66■□□□□ 0.26
CACNB1-206ENST00000539338 ZFYP08048 801 aaPredicted RBP16.66■□□□□ 0.26
CACNB1-206ENST00000539338 PDE4BQ07343 736 aa16.66■□□□□ 0.26
CACNB1-206ENST00000539338 UNC5CLQ8IV45 518 aa16.66■□□□□ 0.26
CACNB1-206ENST00000539338 KCNG4Q8TDN1 519 aa16.66■□□□□ 0.26
CACNB1-206ENST00000539338 PUS7Q96PZ0 661 aaKnown RBP16.66■□□□□ 0.26
CACNB1-206ENST00000539338 SPATA31A6Q5VVP1 1343 aa16.66■□□□□ 0.26
CACNB1-206ENST00000539338 B4DLN1 442 aa16.66■□□□□ 0.26
CACNB1-206ENST00000539338 MRPL12P52815 198 aaKnown RBP16.66■□□□□ 0.26
CACNB1-206ENST00000539338 PAG1Q9NWQ8 432 aa16.66■□□□□ 0.26
CACNB1-206ENST00000539338 KANK3Q6NY19 840 aa16.66■□□□□ 0.26
CACNB1-206ENST00000539338 CCDC12Q8WUD4 166 aaPredicted RBP16.66■□□□□ 0.26
CACNB1-206ENST00000539338 PAFAH1B1P43034 410 aa16.66■□□□□ 0.26
CACNB1-206ENST00000539338 SLC9C2Q5TAH2 1124 aa16.66■□□□□ 0.26
CACNB1-206ENST00000539338 SOS1Q07889 1333 aaPredicted RBP16.66■□□□□ 0.26
CACNB1-206ENST00000539338 IL15P40933 162 aaPredicted RBP16.66■□□□□ 0.26
CACNB1-206ENST00000539338 NFATC2IPQ8NCF5 419 aa16.66■□□□□ 0.26
CACNB1-206ENST00000539338 CALML4Q96GE6 196 aa16.66■□□□□ 0.26
CACNB1-206ENST00000539338 KDM2BQ8NHM5 1336 aa16.65■□□□□ 0.26
CACNB1-206ENST00000539338 N4BP3O15049 544 aa16.65■□□□□ 0.26
CACNB1-206ENST00000539338 GRIN3BO60391 1043 aa16.65■□□□□ 0.26
CACNB1-206ENST00000539338 NIM1KQ8IY84 436 aa16.65■□□□□ 0.26
CACNB1-206ENST00000539338 PAXBP1Q9Y5B6 917 aa16.65■□□□□ 0.26
CACNB1-206ENST00000539338 SLC4A4Q9Y6R1 1079 aa16.65■□□□□ 0.26
CACNB1-206ENST00000539338 H7C1D1 291 aa16.65■□□□□ 0.26
CACNB1-206ENST00000539338 TYRO3Q06418 890 aa16.65■□□□□ 0.26
CACNB1-206ENST00000539338 APOBRQ0VD83 1088 aa16.65■□□□□ 0.26
CACNB1-206ENST00000539338 VPS36Q86VN1 386 aa16.65■□□□□ 0.26
CACNB1-206ENST00000539338 TRERF1Q96PN7 1200 aa16.65■□□□□ 0.26
CACNB1-206ENST00000539338 PRC1O43663 620 aa16.65■□□□□ 0.26
CACNB1-206ENST00000539338 GOLGA6L7A0A1B0GV03 622 aa16.64■□□□□ 0.25
CACNB1-206ENST00000539338 CYP7A1P22680 504 aa16.64■□□□□ 0.25
CACNB1-206ENST00000539338 CCDC113Q9H0I3 377 aa16.64■□□□□ 0.25
CACNB1-206ENST00000539338 CCDC40Q4G0X9 1142 aa16.64■□□□□ 0.25
CACNB1-206ENST00000539338 SEPT12Q8IYM1 358 aa16.64■□□□□ 0.25
CACNB1-206ENST00000539338 PAF1Q8N7H5 531 aa16.64■□□□□ 0.25
CACNB1-206ENST00000539338 GSTO1P78417 241 aa16.64■□□□□ 0.25
CACNB1-206ENST00000539338 TFCP2Q12800 502 aa16.64■□□□□ 0.25
CACNB1-206ENST00000539338 STX8Q9UNK0 236 aa16.64■□□□□ 0.25
CACNB1-206ENST00000539338 MAP3K5Q99683 1374 aa16.64■□□□□ 0.25
CACNB1-206ENST00000539338 ZFYVE9O95405 1425 aa16.64■□□□□ 0.25
CACNB1-206ENST00000539338 RTN1Q16799 776 aa16.64■□□□□ 0.25
CACNB1-206ENST00000539338 LARGE2Q8N3Y3 721 aa16.64■□□□□ 0.25
CACNB1-206ENST00000539338 SIRT1Q96EB6 747 aa16.64■□□□□ 0.25
CACNB1-206ENST00000539338 DISP1Q96F81 1524 aa16.64■□□□□ 0.25
CACNB1-206ENST00000539338 CCDC171Q6TFL3 1326 aa16.64■□□□□ 0.25
CACNB1-206ENST00000539338 GOLGA6L9A6NEM1 432 aa16.63■□□□□ 0.25
CACNB1-206ENST00000539338 NLGN1Q8N2Q7 840 aa16.63■□□□□ 0.25
CACNB1-206ENST00000539338 KRT23Q9C075 422 aa16.63■□□□□ 0.25
CACNB1-206ENST00000539338 TNIP1Q15025 636 aa16.63■□□□□ 0.25
CACNB1-206ENST00000539338 RBM26Q5T8P6 1007 aaKnown RBP16.63■□□□□ 0.25
CACNB1-206ENST00000539338 TCERG1LQ5VWI1 586 aa16.63■□□□□ 0.25
CACNB1-206ENST00000539338 NIP7Q9Y221 180 aaKnown RBP eCLIP16.63■□□□□ 0.25
CACNB1-206ENST00000539338 RRAGBQ5VZM2 374 aa16.63■□□□□ 0.25
CACNB1-206ENST00000539338 TRMT1LQ7Z2T5 733 aaKnown RBP16.63■□□□□ 0.25
CACNB1-206ENST00000539338 SBNO2Q9Y2G9 1366 aa16.63■□□□□ 0.25
CACNB1-206ENST00000539338 SHTN1A0MZ66 631 aa16.63■□□□□ 0.25
CACNB1-206ENST00000539338 MCM3P25205 808 aa16.63■□□□□ 0.25
CACNB1-206ENST00000539338 GTF2F1P35269 517 aaKnown RBP eCLIP16.63■□□□□ 0.25
CACNB1-206ENST00000539338 AMPD3Q01432 767 aa16.63■□□□□ 0.25
CACNB1-206ENST00000539338 RUFY3Q7L099 469 aa16.63■□□□□ 0.25
CACNB1-206ENST00000539338 TRIM47Q96LD4 638 aa16.63■□□□□ 0.25
CACNB1-206ENST00000539338 DNAI2Q9GZS0 605 aa16.63■□□□□ 0.25
CACNB1-206ENST00000539338 ZMYM4Q5VZL5 1548 aa16.63■□□□□ 0.25
CACNB1-206ENST00000539338 ANKRD18AQ8IVF6 992 aa16.62■□□□□ 0.25
CACNB1-206ENST00000539338 NLRP1Q9C000 1473 aa16.62■□□□□ 0.25
CACNB1-206ENST00000539338 TRIM21P19474 475 aaKnown RBP16.62■□□□□ 0.25
CACNB1-206ENST00000539338 DNAI1Q9UI46 699 aa16.62■□□□□ 0.25
CACNB1-206ENST00000539338 TRIM35Q9UPQ4 493 aa16.62■□□□□ 0.25
CACNB1-206ENST00000539338 MAP3K19Q56UN5 1328 aa16.62■□□□□ 0.25
CACNB1-206ENST00000539338 TRIM37O94972 964 aa16.62■□□□□ 0.25
CACNB1-206ENST00000539338 ALDH1B1P30837 517 aa16.62■□□□□ 0.25
CACNB1-206ENST00000539338 INTS4Q96HW7 963 aaKnown RBP16.62■□□□□ 0.25
CACNB1-206ENST00000539338 BICC1Q9H694 974 aaKnown RBP16.62■□□□□ 0.25
CACNB1-206ENST00000539338 BAG3O95817 575 aa16.62■□□□□ 0.25
CACNB1-206ENST00000539338 SYT1P21579 422 aa16.62■□□□□ 0.25
CACNB1-206ENST00000539338 CUL5Q93034 780 aa16.62■□□□□ 0.25
CACNB1-206ENST00000539338 ORAI2Q96SN7 254 aa16.62■□□□□ 0.25
CACNB1-206ENST00000539338 SPTLC2O15270 562 aa16.61■□□□□ 0.25
CACNB1-206ENST00000539338 LIG1P18858 919 aa16.61■□□□□ 0.25
CACNB1-206ENST00000539338 IFIT1BQ5T764 474 aaKnown RBP16.61■□□□□ 0.25
CACNB1-206ENST00000539338 CRNKL1Q9BZJ0 848 aaKnown RBP16.61■□□□□ 0.25
CACNB1-206ENST00000539338 RTL1A6NKG5 1358 aa16.61■□□□□ 0.25
CACNB1-206ENST00000539338 TSPOAP1O95153 1857 aa16.61■□□□□ 0.25
CACNB1-206ENST00000539338 KIF20AO95235 890 aa16.61■□□□□ 0.25
CACNB1-206ENST00000539338 ZNF804AQ7Z570 1209 aa16.61■□□□□ 0.25
CACNB1-206ENST00000539338 GOPCQ9HD26 462 aa16.61■□□□□ 0.25
CACNB1-206ENST00000539338 RNF216Q9NWF9 866 aaPredicted RBP16.61■□□□□ 0.25
CACNB1-206ENST00000539338 CCDC125Q86Z20 511 aa16.61■□□□□ 0.25
CACNB1-206ENST00000539338 ESR2Q92731 530 aa16.61■□□□□ 0.25
CACNB1-206ENST00000539338 JADE2Q9NQC1 790 aa16.61■□□□□ 0.25
CACNB1-206ENST00000539338 PTPDC1A2A3K4 754 aa16.61■□□□□ 0.25
CACNB1-206ENST00000539338 UTP14AQ9BVJ6 771 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms